Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is ureB

Identifier: 110835581

GI number: 110835581

Start: 3077685

End: 3077990

Strand: Reverse

Name: ureB

Synonym: ABO_2720

Alternate gene names: 110835581

Gene position: 3077990-3077685 (Counterclockwise)

Preceding gene: 110835582

Following gene: 110835580

Centisome position: 98.65

GC content: 57.52

Gene sequence:

>306_bases
ATGATTCCAGGCGAATACGCTATTCAGAACGGCGACATCGAGATCAATCCTGGGCGGGAAACGCTCAGCGTGGAAGTGGC
CAATACGGGCGACCGTCCCATTCAGGTGGGCTCCCACTACCACTTCTATGAAGCTAACAATGCCCTGCAGTTCGACCGAG
AAAAAACCCGAGGCTTCCGGCTCAATATTCCGGCCGGCACCGCCGTGCGCATTGAGCCAGGGCAGAGCCGGACAGTAGAG
CTGGTGGCGTATGCGGGACAAAGAAAAGTGTACGGGTTTCAGGGCAAGGTCATGGGGCCGCTTTGA

Upstream 100 bases:

>100_bases
ATCCACGAAGTGCAGGTGGAAGCGACCTTTCCCGATGGCACCAAACTGGTAACGGTTCACGACCCCATCGTTTAAGACGA
TCCGCTATAGGAGAAGCCAA

Downstream 100 bases:

>100_bases
GTCGCGCCTGTCTTTAGGGCCGAACTTGCCCGTGGAAATAGCGCCATGGGAAGCAGGCCGGCGCCTGTACAACACCGCAT
TTCGGAAAGGCTGCCGATAA

Product: urease subunit beta

Products: NA

Alternate protein names: Urea amidohydrolase subunit beta

Number of amino acids: Translated: 101; Mature: 101

Protein sequence:

>101_residues
MIPGEYAIQNGDIEINPGRETLSVEVANTGDRPIQVGSHYHFYEANNALQFDREKTRGFRLNIPAGTAVRIEPGQSRTVE
LVAYAGQRKVYGFQGKVMGPL

Sequences:

>Translated_101_residues
MIPGEYAIQNGDIEINPGRETLSVEVANTGDRPIQVGSHYHFYEANNALQFDREKTRGFRLNIPAGTAVRIEPGQSRTVE
LVAYAGQRKVYGFQGKVMGPL
>Mature_101_residues
MIPGEYAIQNGDIEINPGRETLSVEVANTGDRPIQVGSHYHFYEANNALQFDREKTRGFRLNIPAGTAVRIEPGQSRTVE
LVAYAGQRKVYGFQGKVMGPL

Specific function: Unknown

COG id: COG0832

COG function: function code E; Urea amidohydrolase (urease) beta subunit

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the urease beta subunit family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): URE2_ALCBS (Q0VKY0)

Other databases:

- EMBL:   AM286690
- RefSeq:   YP_694440.1
- ProteinModelPortal:   Q0VKY0
- SMR:   Q0VKY0
- STRING:   Q0VKY0
- GeneID:   4211732
- GenomeReviews:   AM286690_GR
- KEGG:   abo:ABO_2720
- NMPDR:   fig|393595.12.peg.2729
- eggNOG:   COG0832
- HOGENOM:   HBG365918
- OMA:   RIVYGFN
- BioCyc:   ABOR393595:ABO_2720-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01954
- InterPro:   IPR002019
- Gene3D:   G3DSA:2.10.150.10
- TIGRFAMs:   TIGR00192

Pfam domain/function: PF00699 Urease_beta; SSF51278 Urease_beta

EC number: =3.5.1.5

Molecular weight: Translated: 11179; Mature: 11179

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPGEYAIQNGDIEINPGRETLSVEVANTGDRPIQVGSHYHFYEANNALQFDREKTRGFR
CCCCCEEEECCCEEECCCCEEEEEEEECCCCCCEEECCEEEEEECCCEEEECCCCCCCEE
LNIPAGTAVRIEPGQSRTVELVAYAGQRKVYGFQGKVMGPL
EECCCCCEEEECCCCCCEEEEEEECCCCEEEEECCEEECCC
>Mature Secondary Structure
MIPGEYAIQNGDIEINPGRETLSVEVANTGDRPIQVGSHYHFYEANNALQFDREKTRGFR
CCCCCEEEECCCEEECCCCEEEEEEEECCCCCCEEECCEEEEEECCCEEEECCCCCCCEE
LNIPAGTAVRIEPGQSRTVELVAYAGQRKVYGFQGKVMGPL
EECCCCCEEEECCCCCCEEEEEEECCCCEEEEECCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA