Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

Click here to switch to the map view.

The map label for this gene is 110835553

Identifier: 110835553

GI number: 110835553

Start: 3041816

End: 3042802

Strand: Reverse

Name: 110835553

Synonym: ABO_2692

Alternate gene names: NA

Gene position: 3042802-3041816 (Counterclockwise)

Preceding gene: 110835555

Following gene: 110835551

Centisome position: 97.52

GC content: 54.81

Gene sequence:

>987_bases
ATGGCGAGTAATAAACAAGAAGTGGCGAATCGTTTACTGGATGGGCTGATTGGTTATCTATTGGCGCGCCTCTCGCCGGG
GCATCTGGATTCGTTGATCGTTGATGAGCTGGATTACATTCTTGAGAAAGCGGCAAGCTACTCCTTGAATCAGTGGGTAC
AGGCTGAGCAGGTGTTTGCCACGGCGCAGAAGTACGCGGTGAAGATGGATATCAGTGGTGCGATTCCCGAGCTGGTGGGC
GATATGGTGGAGCAATTCTATGACCACGCTATCCAGAGCGAACGCATTGTGGAAGAAGTTATCGATGAGGCCGTGGTGAT
GGCTCTGTTCGATAAGGTGCTGGAAATCCCATTGTCTCGGGAAGGGATGGCTTGGCTGGGGCGCAACCCGGTGTTGCTGG
CGTTGCTGGCGGGGGGGGCCCAGCTGGGAATCAAGACGCTGTTGCATCAGGGCTTACCTAGCCCCTTTCGCGGCCAGTTG
AGCAAACGATTACCGGAGCGCTGGCTGGCCAGCCTAGAGATCCGCTTGCAGGAATGGTTGCTGCGCCGTACGGAGCAATT
ATTGAGTGACCCTTATTTGTACTGTGACGAGAACGTAGCTGAACTGCGTGAGCTGGTGAAGGTGGCCTGGCAGGATTTTG
GGCAACGCCCGGTGGCGGACGTGAAAGAGCTGGTGAGCAGTGAGGATATTCAAGAGCTGTTCGTGATCGTGTTCGAGTAT
TGGCGGGAGCTTCGCCACACAGATTACTTCAATGTCATGTTGGAATCCGGGGTGCAGGCGTTTTTTGATAAATACGGTGA
TACCAGCCTGACGGGCTTGCTTGATGAATTGGGTGTGACCCGCGAGCTGATGTTGGATGATGCTCGTCGCTTCCTGCCGC
CGGTGATGGCTAAGCTGCAGGAAGAAGGCTTGCTAGAGGCATGGTTGCGTCGCCATCTGGAAGGGTATTTTCAGGCGGAG
GAGACGCTGGAGATGCTTAAGGGTTAG

Upstream 100 bases:

>100_bases
TCGAGGTCGACATTATACATTCCTCCGCAACTGTTACATCACTGGATGATACAATTGATGTGCGTATCATCAAGAACTTT
CTTCATAGGGAAGGTAAAAA

Downstream 100 bases:

>100_bases
TGCGTGGATACGCGCCGCAATCAGCTTAAGGAGCCTCAGCAACGCTATTTCATGCTCAGCCTTGCCGCTGGTTCGTTGCC
CTTGGCCAAGGTAACGACGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 328; Mature: 327

Protein sequence:

>328_residues
MASNKQEVANRLLDGLIGYLLARLSPGHLDSLIVDELDYILEKAASYSLNQWVQAEQVFATAQKYAVKMDISGAIPELVG
DMVEQFYDHAIQSERIVEEVIDEAVVMALFDKVLEIPLSREGMAWLGRNPVLLALLAGGAQLGIKTLLHQGLPSPFRGQL
SKRLPERWLASLEIRLQEWLLRRTEQLLSDPYLYCDENVAELRELVKVAWQDFGQRPVADVKELVSSEDIQELFVIVFEY
WRELRHTDYFNVMLESGVQAFFDKYGDTSLTGLLDELGVTRELMLDDARRFLPPVMAKLQEEGLLEAWLRRHLEGYFQAE
ETLEMLKG

Sequences:

>Translated_328_residues
MASNKQEVANRLLDGLIGYLLARLSPGHLDSLIVDELDYILEKAASYSLNQWVQAEQVFATAQKYAVKMDISGAIPELVG
DMVEQFYDHAIQSERIVEEVIDEAVVMALFDKVLEIPLSREGMAWLGRNPVLLALLAGGAQLGIKTLLHQGLPSPFRGQL
SKRLPERWLASLEIRLQEWLLRRTEQLLSDPYLYCDENVAELRELVKVAWQDFGQRPVADVKELVSSEDIQELFVIVFEY
WRELRHTDYFNVMLESGVQAFFDKYGDTSLTGLLDELGVTRELMLDDARRFLPPVMAKLQEEGLLEAWLRRHLEGYFQAE
ETLEMLKG
>Mature_327_residues
ASNKQEVANRLLDGLIGYLLARLSPGHLDSLIVDELDYILEKAASYSLNQWVQAEQVFATAQKYAVKMDISGAIPELVGD
MVEQFYDHAIQSERIVEEVIDEAVVMALFDKVLEIPLSREGMAWLGRNPVLLALLAGGAQLGIKTLLHQGLPSPFRGQLS
KRLPERWLASLEIRLQEWLLRRTEQLLSDPYLYCDENVAELRELVKVAWQDFGQRPVADVKELVSSEDIQELFVIVFEYW
RELRHTDYFNVMLESGVQAFFDKYGDTSLTGLLDELGVTRELMLDDARRFLPPVMAKLQEEGLLEAWLRRHLEGYFQAEE
TLEMLKG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37517; Mature: 37385

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASNKQEVANRLLDGLIGYLLARLSPGHLDSLIVDELDYILEKAASYSLNQWVQAEQVFA
CCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAQKYAVKMDISGAIPELVGDMVEQFYDHAIQSERIVEEVIDEAVVMALFDKVLEIPLSR
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
EGMAWLGRNPVLLALLAGGAQLGIKTLLHQGLPSPFRGQLSKRLPERWLASLEIRLQEWL
CCCHHHCCCHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LRRTEQLLSDPYLYCDENVAELRELVKVAWQDFGQRPVADVKELVSSEDIQELFVIVFEY
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHH
WRELRHTDYFNVMLESGVQAFFDKYGDTSLTGLLDELGVTRELMLDDARRFLPPVMAKLQ
HHHHHHCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
EEGLLEAWLRRHLEGYFQAEETLEMLKG
HCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ASNKQEVANRLLDGLIGYLLARLSPGHLDSLIVDELDYILEKAASYSLNQWVQAEQVFA
CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAQKYAVKMDISGAIPELVGDMVEQFYDHAIQSERIVEEVIDEAVVMALFDKVLEIPLSR
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
EGMAWLGRNPVLLALLAGGAQLGIKTLLHQGLPSPFRGQLSKRLPERWLASLEIRLQEWL
CCCHHHCCCHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LRRTEQLLSDPYLYCDENVAELRELVKVAWQDFGQRPVADVKELVSSEDIQELFVIVFEY
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHH
WRELRHTDYFNVMLESGVQAFFDKYGDTSLTGLLDELGVTRELMLDDARRFLPPVMAKLQ
HHHHHHCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
EEGLLEAWLRRHLEGYFQAEETLEMLKG
HCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA