Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is yaeQ [H]

Identifier: 110835535

GI number: 110835535

Start: 3021609

End: 3022148

Strand: Direct

Name: yaeQ [H]

Synonym: ABO_2674

Alternate gene names: 110835535

Gene position: 3021609-3022148 (Clockwise)

Preceding gene: 110835534

Following gene: 110835536

Centisome position: 96.84

GC content: 56.85

Gene sequence:

>540_bases
ATGGCCCTCACCGCCACCATCTACAAAGCTGAACTCACCGTTTCCGATATGGACCGGGATTATTACGCCACCCATAATCT
GACAGTAGCCTTGCACCCCTCGGAAACCGAATCACGAATGATGTTGCGGCTACTGGCCTTTGCTCTCAACGCCCATGAAG
ATCTGGCCTTCTCTCGAGGCCTGTCCAACCCGGAAGAACCAGACCTGTGGCAACGCCATCCCAACGACACCCTTGCCCAC
TGGATCGAGTTGGGCATGCCCGATGAGAAACGCCTGCGTAAAGCGTGTGGCCTGGCGGAACAGGTTACCCTGTATTGTTA
TGGCCCACGGGCGCCACAGGTATGGTGGGACAGCATGAAGAACAAGGTGCGTCGCTTCGATAACCTGACCATCATCCACG
TGGATGCAGACAGCGAAGCCACACTGGCCACCTGCGCTCAGCGGGCCATGCAGTTACAGGCGATGATTCAGGATGGCCAG
GTCTGGTTCGGCACCACGGAACAGAGCGAAGAAATCACGCTTTCGCAATGGTACCCCTGA

Upstream 100 bases:

>100_bases
AAAACGACTGTTGCGCCCGCCGTACACACTCCAACCTGATACAATCAGCCCCTTTTGCGTGCATGCCTGTTGCGTGCTCC
CTGTTTGCGAGTCCTCTGCC

Downstream 100 bases:

>100_bases
CTCTCATTCTTGTATGACGCCCCGGCATTTGGTGGTCGCGCCTTCCGCTGTGCTACATTCACTCTCTATACGCACATCAA
CGCATTGCCGACACGGAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 178

Protein sequence:

>179_residues
MALTATIYKAELTVSDMDRDYYATHNLTVALHPSETESRMMLRLLAFALNAHEDLAFSRGLSNPEEPDLWQRHPNDTLAH
WIELGMPDEKRLRKACGLAEQVTLYCYGPRAPQVWWDSMKNKVRRFDNLTIIHVDADSEATLATCAQRAMQLQAMIQDGQ
VWFGTTEQSEEITLSQWYP

Sequences:

>Translated_179_residues
MALTATIYKAELTVSDMDRDYYATHNLTVALHPSETESRMMLRLLAFALNAHEDLAFSRGLSNPEEPDLWQRHPNDTLAH
WIELGMPDEKRLRKACGLAEQVTLYCYGPRAPQVWWDSMKNKVRRFDNLTIIHVDADSEATLATCAQRAMQLQAMIQDGQ
VWFGTTEQSEEITLSQWYP
>Mature_178_residues
ALTATIYKAELTVSDMDRDYYATHNLTVALHPSETESRMMLRLLAFALNAHEDLAFSRGLSNPEEPDLWQRHPNDTLAHW
IELGMPDEKRLRKACGLAEQVTLYCYGPRAPQVWWDSMKNKVRRFDNLTIIHVDADSEATLATCAQRAMQLQAMIQDGQV
WFGTTEQSEEITLSQWYP

Specific function: Unknown

COG id: COG4681

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786388, Length=177, Percent_Identity=45.7627118644068, Blast_Score=169, Evalue=1e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009822 [H]

Pfam domain/function: PF07152 YaeQ [H]

EC number: NA

Molecular weight: Translated: 20574; Mature: 20443

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALTATIYKAELTVSDMDRDYYATHNLTVALHPSETESRMMLRLLAFALNAHEDLAFSRG
CCEEEEEEEEEEEHHHCCCCEEEECCEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHCC
LSNPEEPDLWQRHPNDTLAHWIELGMPDEKRLRKACGLAEQVTLYCYGPRAPQVWWDSMK
CCCCCCCCHHHCCCCHHHHHHHHCCCCCHHHHHHHCCCCHHEEEEEECCCCCHHHHHHHH
NKVRRFDNLTIIHVDADSEATLATCAQRAMQLQAMIQDGQVWFGTTEQSEEITLSQWYP
HHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCEEEECCCC
>Mature Secondary Structure 
ALTATIYKAELTVSDMDRDYYATHNLTVALHPSETESRMMLRLLAFALNAHEDLAFSRG
CEEEEEEEEEEEHHHCCCCEEEECCEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHCC
LSNPEEPDLWQRHPNDTLAHWIELGMPDEKRLRKACGLAEQVTLYCYGPRAPQVWWDSMK
CCCCCCCCHHHCCCCHHHHHHHHCCCCCHHHHHHHCCCCHHEEEEEECCCCCHHHHHHHH
NKVRRFDNLTIIHVDADSEATLATCAQRAMQLQAMIQDGQVWFGTTEQSEEITLSQWYP
HHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]