Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is 110835503

Identifier: 110835503

GI number: 110835503

Start: 2988402

End: 2988806

Strand: Direct

Name: 110835503

Synonym: ABO_2642

Alternate gene names: NA

Gene position: 2988402-2988806 (Clockwise)

Preceding gene: 110835501

Following gene: 110835507

Centisome position: 95.78

GC content: 51.6

Gene sequence:

>405_bases
ATGATCAACTACAATAAGCTGCTTTTTGCAGGACCATTCGGCGCAGGAAAAACTACGGCAATACGCGCGATCTCCAATTC
AGCGCCTATTTCCACCGGAACGCCTATTTCCACAGGCCCTGAAGGAGAAAAAACCACCACGACAGTGGCAATGGATTACA
GCTTCATCAATATGGAAGGCACTACCGTACATGTGTATGGCATGCCCGGACAGGATCGCCTTGCGTTCATGCGAGGGATC
CTTATGGAAGGGGCCATTGGCGCCATCCTATTGCTCGATGCAGCTCAGCCTTCTCTCAACGATGATCTGCAAAGCTGGCT
GAAATCTTTGGCGGCTTTATCTCCAGGGCCCCCTATCGTCATTGGGTTACCAAAACCGAACTTGCACCCCCCTCCTTCTC
TCTGA

Upstream 100 bases:

>100_bases
ACAACAAGGGCAGCAACTTCAACGAAGAGAAAAAACTTTACCCTCTTCATCAAGTAACGTTTTTTCTACTTTAAAAAAGT
GGCTCGGGATTTAAGAAACA

Downstream 100 bases:

>100_bases
ACAGCCTTAGGCAACTGGTCAGTACGGTTTCCGTTACCAGCCCGGTTCTTTCCATAGATGCCCGCGAGAAAGAAGATACA
CAACAGTTAATCCGAATGAT

Product: hypothetical protein

Products: NA

Alternate protein names: GTPase

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MINYNKLLFAGPFGAGKTTAIRAISNSAPISTGTPISTGPEGEKTTTTVAMDYSFINMEGTTVHVYGMPGQDRLAFMRGI
LMEGAIGAILLLDAAQPSLNDDLQSWLKSLAALSPGPPIVIGLPKPNLHPPPSL

Sequences:

>Translated_134_residues
MINYNKLLFAGPFGAGKTTAIRAISNSAPISTGTPISTGPEGEKTTTTVAMDYSFINMEGTTVHVYGMPGQDRLAFMRGI
LMEGAIGAILLLDAAQPSLNDDLQSWLKSLAALSPGPPIVIGLPKPNLHPPPSL
>Mature_134_residues
MINYNKLLFAGPFGAGKTTAIRAISNSAPISTGTPISTGPEGEKTTTTVAMDYSFINMEGTTVHVYGMPGQDRLAFMRGI
LMEGAIGAILLLDAAQPSLNDDLQSWLKSLAALSPGPPIVIGLPKPNLHPPPSL

Specific function: Unknown

COG id: COG2229

COG function: function code R; Predicted GTPase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14018; Mature: 14018

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINYNKLLFAGPFGAGKTTAIRAISNSAPISTGTPISTGPEGEKTTTTVAMDYSFINMEG
CCCCCCEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEECCC
TTVHVYGMPGQDRLAFMRGILMEGAIGAILLLDAAQPSLNDDLQSWLKSLAALSPGPPIV
CEEEEEECCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEE
IGLPKPNLHPPPSL
EECCCCCCCCCCCC
>Mature Secondary Structure
MINYNKLLFAGPFGAGKTTAIRAISNSAPISTGTPISTGPEGEKTTTTVAMDYSFINMEG
CCCCCCEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEECCC
TTVHVYGMPGQDRLAFMRGILMEGAIGAILLLDAAQPSLNDDLQSWLKSLAALSPGPPIV
CEEEEEECCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEE
IGLPKPNLHPPPSL
EECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA