| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110835412
Identifier: 110835412
GI number: 110835412
Start: 2891823
End: 2892548
Strand: Direct
Name: 110835412
Synonym: ABO_2551
Alternate gene names: NA
Gene position: 2891823-2892548 (Clockwise)
Preceding gene: 110835407
Following gene: 110835414
Centisome position: 92.68
GC content: 57.3
Gene sequence:
>726_bases TTGTACTACGCCCTCCTTACTCTACTTGCGCTACTAACCCTACTGATCAGCAACACACTGCAAGCCCACCCCGGAAGCCT CAACCAACAAGGCGGACACACCGACCGCAGCACCGGTGACTACCATTGCCACCGCGCCCCCTGCTCCACGCTTCACCGGC AACAACAAAAGGCCCAACAGGACGCCACCGACGCACAACGGGCGTTCAGTGGACTCTACGATCGAAACCTCTGGCCCCAC TGGACTGACGCAGACCAAGATTGCCAAGACACACGGGCAGAATTATTGATTGCCTCCAGCCGGCAGACTGTGACCTTCAC CGACCCGGATCAATGCACCGTGGCCACAGGTCGCTGGTACGACCCCTACACCAACCGCACCTTTACCCATGCGGGGGACT TGGACGTGGATCATTTTGTGCCGCTGCGCCATGCCCACGGCCACGGTGGCGACCAATGGGACAAAGCATTACGCCAACAA TTCGCTAATGACCCAGACAACCTGATTCCGGTGTCCGCCAGCGCCAATCGCAGTAAAGGTGCTCGCAGCCCAGATCAGTG GCTTCCTGATAACCGCCTCTATTGGTGCGAATATGGCCGGCATTGGAAACGCATCAAACAACGTTACCAGTTGATGGTGA CGCCCCAGGAAGCTGACGCACTGAAACAACTGCTAACCCACTGCTCAATGCCCTCTACCCCTAAAACGACAAAACCCCGA CCATAA
Upstream 100 bases:
>100_bases TCGCCGGAATCGGCCCCAATCTTTCCTTTGTACGCTTTTACCTACAACAAGATTCGTATATGCCTTATCCTCCCGCCAAA CGACATAAACAGGCCCCCCT
Downstream 100 bases:
>100_bases GGCCAGGGTTTTGGTTGTCGCATCACCCGCCTTGAGGCGGAGAGCTCACTGCATGTAAGGCTTACTGCTCTGCAGCATCC TTCATGTCTTCGGCGGACTC
Product: hypothetical protein
Products: NA
Alternate protein names: Lipoprotein; Extracellular Deoxyribonuclease; S-Layer Domain-Containing Protein; Excalibur Domain-Containing Protein; Excalibur Domain Protein; Conserved Membrane Protein; 3-Oxoacyl-[Acyl-Carrier-Protein] Synthase III; S-Layer Domain Protein; Cation Transport ATPase
Number of amino acids: Translated: 241; Mature: 241
Protein sequence:
>241_residues MYYALLTLLALLTLLISNTLQAHPGSLNQQGGHTDRSTGDYHCHRAPCSTLHRQQQKAQQDATDAQRAFSGLYDRNLWPH WTDADQDCQDTRAELLIASSRQTVTFTDPDQCTVATGRWYDPYTNRTFTHAGDLDVDHFVPLRHAHGHGGDQWDKALRQQ FANDPDNLIPVSASANRSKGARSPDQWLPDNRLYWCEYGRHWKRIKQRYQLMVTPQEADALKQLLTHCSMPSTPKTTKPR P
Sequences:
>Translated_241_residues MYYALLTLLALLTLLISNTLQAHPGSLNQQGGHTDRSTGDYHCHRAPCSTLHRQQQKAQQDATDAQRAFSGLYDRNLWPH WTDADQDCQDTRAELLIASSRQTVTFTDPDQCTVATGRWYDPYTNRTFTHAGDLDVDHFVPLRHAHGHGGDQWDKALRQQ FANDPDNLIPVSASANRSKGARSPDQWLPDNRLYWCEYGRHWKRIKQRYQLMVTPQEADALKQLLTHCSMPSTPKTTKPR P >Mature_241_residues MYYALLTLLALLTLLISNTLQAHPGSLNQQGGHTDRSTGDYHCHRAPCSTLHRQQQKAQQDATDAQRAFSGLYDRNLWPH WTDADQDCQDTRAELLIASSRQTVTFTDPDQCTVATGRWYDPYTNRTFTHAGDLDVDHFVPLRHAHGHGGDQWDKALRQQ FANDPDNLIPVSASANRSKGARSPDQWLPDNRLYWCEYGRHWKRIKQRYQLMVTPQEADALKQLLTHCSMPSTPKTTKPR P
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27548; Mature: 27548
Theoretical pI: Translated: 7.92; Mature: 7.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYYALLTLLALLTLLISNTLQAHPGSLNQQGGHTDRSTGDYHCHRAPCSTLHRQQQKAQQ CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH DATDAQRAFSGLYDRNLWPHWTDADQDCQDTRAELLIASSRQTVTFTDPDQCTVATGRWY HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHEEEECCCCEEEECCCCCEEEECCCCC DPYTNRTFTHAGDLDVDHFVPLRHAHGHGGDQWDKALRQQFANDPDNLIPVSASANRSKG CCCCCCEECCCCCCCHHHHCCHHHCCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCC ARSPDQWLPDNRLYWCEYGRHWKRIKQRYQLMVTPQEADALKQLLTHCSMPSTPKTTKPR CCCCHHCCCCCCEEEEHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHCCCCCCCCCCCCC P C >Mature Secondary Structure MYYALLTLLALLTLLISNTLQAHPGSLNQQGGHTDRSTGDYHCHRAPCSTLHRQQQKAQQ CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH DATDAQRAFSGLYDRNLWPHWTDADQDCQDTRAELLIASSRQTVTFTDPDQCTVATGRWY HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHEEEECCCCEEEECCCCCEEEECCCCC DPYTNRTFTHAGDLDVDHFVPLRHAHGHGGDQWDKALRQQFANDPDNLIPVSASANRSKG CCCCCCEECCCCCCCHHHHCCHHHCCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCC ARSPDQWLPDNRLYWCEYGRHWKRIKQRYQLMVTPQEADALKQLLTHCSMPSTPKTTKPR CCCCHHCCCCCCEEEEHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHCCCCCCCCCCCCC P C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA