Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is 110835412

Identifier: 110835412

GI number: 110835412

Start: 2891823

End: 2892548

Strand: Direct

Name: 110835412

Synonym: ABO_2551

Alternate gene names: NA

Gene position: 2891823-2892548 (Clockwise)

Preceding gene: 110835407

Following gene: 110835414

Centisome position: 92.68

GC content: 57.3

Gene sequence:

>726_bases
TTGTACTACGCCCTCCTTACTCTACTTGCGCTACTAACCCTACTGATCAGCAACACACTGCAAGCCCACCCCGGAAGCCT
CAACCAACAAGGCGGACACACCGACCGCAGCACCGGTGACTACCATTGCCACCGCGCCCCCTGCTCCACGCTTCACCGGC
AACAACAAAAGGCCCAACAGGACGCCACCGACGCACAACGGGCGTTCAGTGGACTCTACGATCGAAACCTCTGGCCCCAC
TGGACTGACGCAGACCAAGATTGCCAAGACACACGGGCAGAATTATTGATTGCCTCCAGCCGGCAGACTGTGACCTTCAC
CGACCCGGATCAATGCACCGTGGCCACAGGTCGCTGGTACGACCCCTACACCAACCGCACCTTTACCCATGCGGGGGACT
TGGACGTGGATCATTTTGTGCCGCTGCGCCATGCCCACGGCCACGGTGGCGACCAATGGGACAAAGCATTACGCCAACAA
TTCGCTAATGACCCAGACAACCTGATTCCGGTGTCCGCCAGCGCCAATCGCAGTAAAGGTGCTCGCAGCCCAGATCAGTG
GCTTCCTGATAACCGCCTCTATTGGTGCGAATATGGCCGGCATTGGAAACGCATCAAACAACGTTACCAGTTGATGGTGA
CGCCCCAGGAAGCTGACGCACTGAAACAACTGCTAACCCACTGCTCAATGCCCTCTACCCCTAAAACGACAAAACCCCGA
CCATAA

Upstream 100 bases:

>100_bases
TCGCCGGAATCGGCCCCAATCTTTCCTTTGTACGCTTTTACCTACAACAAGATTCGTATATGCCTTATCCTCCCGCCAAA
CGACATAAACAGGCCCCCCT

Downstream 100 bases:

>100_bases
GGCCAGGGTTTTGGTTGTCGCATCACCCGCCTTGAGGCGGAGAGCTCACTGCATGTAAGGCTTACTGCTCTGCAGCATCC
TTCATGTCTTCGGCGGACTC

Product: hypothetical protein

Products: NA

Alternate protein names: Lipoprotein; Extracellular Deoxyribonuclease; S-Layer Domain-Containing Protein; Excalibur Domain-Containing Protein; Excalibur Domain Protein; Conserved Membrane Protein; 3-Oxoacyl-[Acyl-Carrier-Protein] Synthase III; S-Layer Domain Protein; Cation Transport ATPase

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MYYALLTLLALLTLLISNTLQAHPGSLNQQGGHTDRSTGDYHCHRAPCSTLHRQQQKAQQDATDAQRAFSGLYDRNLWPH
WTDADQDCQDTRAELLIASSRQTVTFTDPDQCTVATGRWYDPYTNRTFTHAGDLDVDHFVPLRHAHGHGGDQWDKALRQQ
FANDPDNLIPVSASANRSKGARSPDQWLPDNRLYWCEYGRHWKRIKQRYQLMVTPQEADALKQLLTHCSMPSTPKTTKPR
P

Sequences:

>Translated_241_residues
MYYALLTLLALLTLLISNTLQAHPGSLNQQGGHTDRSTGDYHCHRAPCSTLHRQQQKAQQDATDAQRAFSGLYDRNLWPH
WTDADQDCQDTRAELLIASSRQTVTFTDPDQCTVATGRWYDPYTNRTFTHAGDLDVDHFVPLRHAHGHGGDQWDKALRQQ
FANDPDNLIPVSASANRSKGARSPDQWLPDNRLYWCEYGRHWKRIKQRYQLMVTPQEADALKQLLTHCSMPSTPKTTKPR
P
>Mature_241_residues
MYYALLTLLALLTLLISNTLQAHPGSLNQQGGHTDRSTGDYHCHRAPCSTLHRQQQKAQQDATDAQRAFSGLYDRNLWPH
WTDADQDCQDTRAELLIASSRQTVTFTDPDQCTVATGRWYDPYTNRTFTHAGDLDVDHFVPLRHAHGHGGDQWDKALRQQ
FANDPDNLIPVSASANRSKGARSPDQWLPDNRLYWCEYGRHWKRIKQRYQLMVTPQEADALKQLLTHCSMPSTPKTTKPR
P

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27548; Mature: 27548

Theoretical pI: Translated: 7.92; Mature: 7.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYYALLTLLALLTLLISNTLQAHPGSLNQQGGHTDRSTGDYHCHRAPCSTLHRQQQKAQQ
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
DATDAQRAFSGLYDRNLWPHWTDADQDCQDTRAELLIASSRQTVTFTDPDQCTVATGRWY
HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHEEEECCCCEEEECCCCCEEEECCCCC
DPYTNRTFTHAGDLDVDHFVPLRHAHGHGGDQWDKALRQQFANDPDNLIPVSASANRSKG
CCCCCCEECCCCCCCHHHHCCHHHCCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCC
ARSPDQWLPDNRLYWCEYGRHWKRIKQRYQLMVTPQEADALKQLLTHCSMPSTPKTTKPR
CCCCHHCCCCCCEEEEHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHCCCCCCCCCCCCC
P
C
>Mature Secondary Structure
MYYALLTLLALLTLLISNTLQAHPGSLNQQGGHTDRSTGDYHCHRAPCSTLHRQQQKAQQ
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
DATDAQRAFSGLYDRNLWPHWTDADQDCQDTRAELLIASSRQTVTFTDPDQCTVATGRWY
HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHEEEECCCCEEEECCCCCEEEECCCCC
DPYTNRTFTHAGDLDVDHFVPLRHAHGHGGDQWDKALRQQFANDPDNLIPVSASANRSKG
CCCCCCEECCCCCCCHHHHCCHHHCCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCC
ARSPDQWLPDNRLYWCEYGRHWKRIKQRYQLMVTPQEADALKQLLTHCSMPSTPKTTKPR
CCCCHHCCCCCCEEEEHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHCCCCCCCCCCCCC
P
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA