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The map label for this gene is 110835407

Identifier: 110835407

GI number: 110835407

Start: 2886946

End: 2887887

Strand: Direct

Name: 110835407

Synonym: ABO_2546

Alternate gene names: NA

Gene position: 2886946-2887887 (Clockwise)

Preceding gene: 110835399

Following gene: 110835412

Centisome position: 92.53

GC content: 54.03

Gene sequence:

>942_bases
ATGTTCACCCTAATCATACCAACAAGAGACAGCACCATGGACGCGGCAGCATTGAACAAACAAGCCATTGCCTGTGCCAA
ACACTATATGGGCAAAACCGCCTGGCCGACAATTTTACTAACCGTGGCCGTAGTCGCCGCCTTTATTGCCACACTCACGT
TATTCGCCAATGGTACGCTACCGGCCTGGGGCGCTTATCTGCTGGTCGCCGTACTGACCTACATGTCCTATACGCCACTA
CATGAGGCCGCCCACGGCAATATTCACGGACAGAATGATGGCCGCAAATGGATCAACGATTTGTGCGGGTACCTAGTAGC
CCCCATTATTGCGATCCCCTATGCCTCTCATCGCATTGAGCACTTCACCCACCACCGCTATACCAATCAACCGGGCAAGG
ATCCGGACTTTATTATCAGCGGGATGCAACAAGGACTACTGGGGTTACTGGCCGCCGGGCTACGCTTCCAGTGGGTGCAG
AACACATTTTTTGTGCAACACAGCTGGGCCACTGCGTCATCCAAGGAAAGATTGATTTATTGCACCGAACTGGCGGTATC
GATCGGCTGGCGCATTGCCTTCCTAACGATGGTAGACCAGCCCGGCACCATCGCCGTGCTGCTGCTGGGATATTACACTG
GCGGGCTATTCACCGCCTACTGGTTTGCCTATCGTCCACACCACCCTTACAAGGTAAGTGAACGTTATCGCAACACTAAC
AGCCTGATTATGCCGCGCTGGATGAAGCCGCTGGAATGGTTCTGGTTGGGCCAGAACCTGCACTCCATCCATCACCTTTT
TCCGCGTGTGCCGTTCTATAATTACCACGCCCTACATCGGGATATTGAGCCGGTCTTGCAGGCACAGGGCACGCCGATTA
TGGGTATTTTTTCCCGCCAACCGCTAGCCGGCAACGCGTACCCATCAGCAAAGAAGCCGTAG

Upstream 100 bases:

>100_bases
ATGCATTAACCGTTCCGTTGATACCCCCCTGTCACACACTGGCCACTTTTGCAGGGTGATTGGCCACGGTGGCTATTCTG
ATTGTTGTGCCGTCTACGTA

Downstream 100 bases:

>100_bases
CACCCAACAAGACGATCAACCTGAGTGCATACCGCTAGCGGTATGCACTCGCACATCGCTAATACAACGCCACGATGCCC
TCGAGGGAACCGCCTGAACT

Product: Fatty acid desaturase

Products: NA

Alternate protein names: Beta-Carotene Hydroxylase; Fatty Acid Desaturase Domain Protein; Electron Transfer Protein FdxB; Beta-Carotene Oxygenase CrtR; Fatty Acid Desaturase Family Protein; Phthalate 4 5-Dioxygenase; B-Carotene Hydroxylase

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MFTLIIPTRDSTMDAAALNKQAIACAKHYMGKTAWPTILLTVAVVAAFIATLTLFANGTLPAWGAYLLVAVLTYMSYTPL
HEAAHGNIHGQNDGRKWINDLCGYLVAPIIAIPYASHRIEHFTHHRYTNQPGKDPDFIISGMQQGLLGLLAAGLRFQWVQ
NTFFVQHSWATASSKERLIYCTELAVSIGWRIAFLTMVDQPGTIAVLLLGYYTGGLFTAYWFAYRPHHPYKVSERYRNTN
SLIMPRWMKPLEWFWLGQNLHSIHHLFPRVPFYNYHALHRDIEPVLQAQGTPIMGIFSRQPLAGNAYPSAKKP

Sequences:

>Translated_313_residues
MFTLIIPTRDSTMDAAALNKQAIACAKHYMGKTAWPTILLTVAVVAAFIATLTLFANGTLPAWGAYLLVAVLTYMSYTPL
HEAAHGNIHGQNDGRKWINDLCGYLVAPIIAIPYASHRIEHFTHHRYTNQPGKDPDFIISGMQQGLLGLLAAGLRFQWVQ
NTFFVQHSWATASSKERLIYCTELAVSIGWRIAFLTMVDQPGTIAVLLLGYYTGGLFTAYWFAYRPHHPYKVSERYRNTN
SLIMPRWMKPLEWFWLGQNLHSIHHLFPRVPFYNYHALHRDIEPVLQAQGTPIMGIFSRQPLAGNAYPSAKKP
>Mature_313_residues
MFTLIIPTRDSTMDAAALNKQAIACAKHYMGKTAWPTILLTVAVVAAFIATLTLFANGTLPAWGAYLLVAVLTYMSYTPL
HEAAHGNIHGQNDGRKWINDLCGYLVAPIIAIPYASHRIEHFTHHRYTNQPGKDPDFIISGMQQGLLGLLAAGLRFQWVQ
NTFFVQHSWATASSKERLIYCTELAVSIGWRIAFLTMVDQPGTIAVLLLGYYTGGLFTAYWFAYRPHHPYKVSERYRNTN
SLIMPRWMKPLEWFWLGQNLHSIHHLFPRVPFYNYHALHRDIEPVLQAQGTPIMGIFSRQPLAGNAYPSAKKP

Specific function: Unknown

COG id: COG3239

COG function: function code I; Fatty acid desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35399; Mature: 35399

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTLIIPTRDSTMDAAALNKQAIACAKHYMGKTAWPTILLTVAVVAAFIATLTLFANGTL
CEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PAWGAYLLVAVLTYMSYTPLHEAAHGNIHGQNDGRKWINDLCGYLVAPIIAIPYASHRIE
CHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHH
HFTHHRYTNQPGKDPDFIISGMQQGLLGLLAAGLRFQWVQNTFFVQHSWATASSKERLIY
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEHHCEEEEEECCCCCCCCCCEEE
CTELAVSIGWRIAFLTMVDQPGTIAVLLLGYYTGGLFTAYWFAYRPHHPYKVSERYRNTN
EHHHHHHHHHEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCC
SLIMPRWMKPLEWFWLGQNLHSIHHLFPRVPFYNYHALHRDIEPVLQAQGTPIMGIFSRQ
CEECHHHCCHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCC
PLAGNAYPSAKKP
CCCCCCCCCCCCC
>Mature Secondary Structure
MFTLIIPTRDSTMDAAALNKQAIACAKHYMGKTAWPTILLTVAVVAAFIATLTLFANGTL
CEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PAWGAYLLVAVLTYMSYTPLHEAAHGNIHGQNDGRKWINDLCGYLVAPIIAIPYASHRIE
CHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHH
HFTHHRYTNQPGKDPDFIISGMQQGLLGLLAAGLRFQWVQNTFFVQHSWATASSKERLIY
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEHHCEEEEEECCCCCCCCCCEEE
CTELAVSIGWRIAFLTMVDQPGTIAVLLLGYYTGGLFTAYWFAYRPHHPYKVSERYRNTN
EHHHHHHHHHEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCC
SLIMPRWMKPLEWFWLGQNLHSIHHLFPRVPFYNYHALHRDIEPVLQAQGTPIMGIFSRQ
CEECHHHCCHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCC
PLAGNAYPSAKKP
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA