Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is 110835382

Identifier: 110835382

GI number: 110835382

Start: 2859068

End: 2859760

Strand: Direct

Name: 110835382

Synonym: ABO_2521

Alternate gene names: NA

Gene position: 2859068-2859760 (Clockwise)

Preceding gene: 110835381

Following gene: 110835385

Centisome position: 91.63

GC content: 54.98

Gene sequence:

>693_bases
ATGCAGCCTGATTTCGTCTACACTCTGACCACGCCGACGGGGTGGCAACAACGCATCCGTATTTCTCTGTTAGAAGAGCA
CGGTGCCATTGCCATTCCCGATACGTTTACCCCCCCCGACTGGGCCGCGCTGAGCTATAACCAGTGCAGTCACTGCCCAT
TGAACCCTCACGAAAATCGCTATTGCCCCATTGCCCGTAACCTGGCCTATCTGTTGCCGGAATCTGCGCTAGGGGATTCG
TTTCAAGCAGTACTTTTGGACGTGGAAACGCCCCAACGACGTTACCAACAAGAGACCACCCTGCAGCGGGCTCTGAGCTC
CCTGTTTGGGCTGATCTGCGCGCTGAGCGACTGCCCGCATACACGCTTTCTGCGGCCCATGGCCCACTTCCATCTTCCAC
TGAGTAGCGACACGGAAACGCTTGTGCGCACCGCCAGCTTGTATCTGTTGCATCATTACATTCGCAACCGCCAACAACCT
GAACAAGCCGTGTCTCTGGATGGGCTAAATGACCGTTACCGCGCACTCAATGAACTAAATCGTTGCTTTACCGACCGCCT
ACGCCAGCATGGAGAATCAGACGCATCCGTGAATGCACTCGTGTTGCTGAGTATCACCACACGGGAAATGCACTGGAATT
TGGAAGAAGAGCTGGGGAACTTGGCCGCACTGTTTGATGACAGCGATGCTTAG

Upstream 100 bases:

>100_bases
ATCATTCAGCACCACGGCGGCACCATGACCGTGGCAAGCCAACTCGGCGCCGGTACCATTTTTACGATCCGGCTACCGCT
AAAGCAGACCGACCGGGCCG

Downstream 100 bases:

>100_bases
CGGGGTTCTGGAGAGCCCCTGACGTACTCTTCATGCACGCCGTTTTATCGACGACAAACGTCCGCTCCTAACTGTAATCC
ATCCCTGGCGATGAGGGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MQPDFVYTLTTPTGWQQRIRISLLEEHGAIAIPDTFTPPDWAALSYNQCSHCPLNPHENRYCPIARNLAYLLPESALGDS
FQAVLLDVETPQRRYQQETTLQRALSSLFGLICALSDCPHTRFLRPMAHFHLPLSSDTETLVRTASLYLLHHYIRNRQQP
EQAVSLDGLNDRYRALNELNRCFTDRLRQHGESDASVNALVLLSITTREMHWNLEEELGNLAALFDDSDA

Sequences:

>Translated_230_residues
MQPDFVYTLTTPTGWQQRIRISLLEEHGAIAIPDTFTPPDWAALSYNQCSHCPLNPHENRYCPIARNLAYLLPESALGDS
FQAVLLDVETPQRRYQQETTLQRALSSLFGLICALSDCPHTRFLRPMAHFHLPLSSDTETLVRTASLYLLHHYIRNRQQP
EQAVSLDGLNDRYRALNELNRCFTDRLRQHGESDASVNALVLLSITTREMHWNLEEELGNLAALFDDSDA
>Mature_230_residues
MQPDFVYTLTTPTGWQQRIRISLLEEHGAIAIPDTFTPPDWAALSYNQCSHCPLNPHENRYCPIARNLAYLLPESALGDS
FQAVLLDVETPQRRYQQETTLQRALSSLFGLICALSDCPHTRFLRPMAHFHLPLSSDTETLVRTASLYLLHHYIRNRQQP
EQAVSLDGLNDRYRALNELNRCFTDRLRQHGESDASVNALVLLSITTREMHWNLEEELGNLAALFDDSDA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26275; Mature: 26275

Theoretical pI: Translated: 5.49; Mature: 5.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPDFVYTLTTPTGWQQRIRISLLEEHGAIAIPDTFTPPDWAALSYNQCSHCPLNPHENR
CCCCEEEEEECCCCHHHHHHHHHHHCCCCEECCCCCCCCCCCEECCCCCCCCCCCCCCCC
YCPIARNLAYLLPESALGDSFQAVLLDVETPQRRYQQETTLQRALSSLFGLICALSDCPH
CCCHHHHHHHHCCCHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
TRFLRPMAHFHLPLSSDTETLVRTASLYLLHHYIRNRQQPEQAVSLDGLNDRYRALNELN
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHH
RCFTDRLRQHGESDASVNALVLLSITTREMHWNLEEELGNLAALFDDSDA
HHHHHHHHHCCCCCCCCEEEEEEEEEHHHHHCCHHHHHCCEEEECCCCCC
>Mature Secondary Structure
MQPDFVYTLTTPTGWQQRIRISLLEEHGAIAIPDTFTPPDWAALSYNQCSHCPLNPHENR
CCCCEEEEEECCCCHHHHHHHHHHHCCCCEECCCCCCCCCCCEECCCCCCCCCCCCCCCC
YCPIARNLAYLLPESALGDSFQAVLLDVETPQRRYQQETTLQRALSSLFGLICALSDCPH
CCCHHHHHHHHCCCHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
TRFLRPMAHFHLPLSSDTETLVRTASLYLLHHYIRNRQQPEQAVSLDGLNDRYRALNELN
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHH
RCFTDRLRQHGESDASVNALVLLSITTREMHWNLEEELGNLAALFDDSDA
HHHHHHHHHCCCCCCCCEEEEEEEEEHHHHHCCHHHHHCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA