Click here to switch to the map view.

The map label for this gene is acrR [C]

Identifier: 110835385

GI number: 110835385

Start: 2864486

End: 2865136

Strand: Direct

Name: acrR [C]

Synonym: ABO_2524

Alternate gene names: 110835385

Gene position: 2864486-2865136 (Clockwise)

Preceding gene: 110835382

Following gene: 110835387

Centisome position: 91.81

GC content: 52.38

Gene sequence:

>651_bases
ATGATTGACAGTGTTTCCCCAGATCAACCCAATCCTCGCGGGCGCCCTAAAGACCCGGCAAAGCGCACCGCCATCCTTAA
GGCGGCTACAGCGTTGTTTCTCAAGCATGGGTTTACCGGCACTAGCATGGATGCCGTGGCCAAGCAGGCTGGTGTCTCCA
AACTCACGGTTTATAGCCATTTTAGTGATAAAGAGACGCTATTTTCGTCAGCGATTGAGACGACATGTCACAACTTACTT
CCCATGCCTATCTTCGCACTGGAACCGCACCTTTCGATTCGCGCCACCCTGACCAAAATTGGCCTAGCGTTTCTACAACT
GATTCATACACCCAAGGTAGTTGAACTACAGCGACTAATGACCAGCCAAGCGACACAGGACCCGGCCATGTCACAGCTAT
TTTTCGAGGCTGGGCCACAACGTACCGTCACCGCCATGGAAAACTTGGTACGCAAAGGTAATAACATTGGGCTCCTGCAG
GCGGACAACCCCAAGCAAGCCGCAGAGAATTTCTTCAGCTTGCTGCAAGGCTGTGAGCACATGCGCGTGATGATCGGCTG
CAATGCGCCCATGACAGCCAGCGAAGCGAAACCCCATGCCGAACAAGTTGTAGATATGTTTCTGCGGGCTTACGGGAAGG
AAAAGGAATAA

Upstream 100 bases:

>100_bases
GGCTCTGCTTGTGATGCAGATTCTGCCGGGCTTAACTTGCCGGCATGCTATACTCGGCAGTATAGTAATTTTATTAAACT
GAACCGTCCAGTATTGAAAT

Downstream 100 bases:

>100_bases
TCACGTTTAGCGGGAAAACCAAAGTTCATCACGAAGCGCAAGATATCCGGAACCTGGCTATCCAACACACCTCGCGGCTC
AATCCCGGAGACACCGCTGG

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulator TetR Family Protein; TetR-Family Transcriptional Regulator; Bacterial Regulatory Protein; Transcription Regulator Protein; Transcriptional Regulator Protein; TetR-Type Transcriptional Regulator; TetR-Family Trancriptional Regulatory Protein; TetR Transcription Regulator; Transcriptional Regulator Protein TetR Family; Transcriptional Regulatory Protein; TetR Family Transcriptional RegulatoR; Regulatory Protein Tetr; Calsymin Transcriptional Regulator; Transcriptional Regulator Tetr Family; TetR Family Transcriptional Regulatory Protein; Transcriptional Regulator TetR/AcrR Family; Bacterial Regulatory Protein TetR Family Protein; Transcriptional Regulator TetR-Like; TetR Family Regulatory Protein; Transcriptional Regulator TetR; TetR/AcrR Family Transcriptional Regulator; Transcriptional Regulator Protein Tetr Family

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MIDSVSPDQPNPRGRPKDPAKRTAILKAATALFLKHGFTGTSMDAVAKQAGVSKLTVYSHFSDKETLFSSAIETTCHNLL
PMPIFALEPHLSIRATLTKIGLAFLQLIHTPKVVELQRLMTSQATQDPAMSQLFFEAGPQRTVTAMENLVRKGNNIGLLQ
ADNPKQAAENFFSLLQGCEHMRVMIGCNAPMTASEAKPHAEQVVDMFLRAYGKEKE

Sequences:

>Translated_216_residues
MIDSVSPDQPNPRGRPKDPAKRTAILKAATALFLKHGFTGTSMDAVAKQAGVSKLTVYSHFSDKETLFSSAIETTCHNLL
PMPIFALEPHLSIRATLTKIGLAFLQLIHTPKVVELQRLMTSQATQDPAMSQLFFEAGPQRTVTAMENLVRKGNNIGLLQ
ADNPKQAAENFFSLLQGCEHMRVMIGCNAPMTASEAKPHAEQVVDMFLRAYGKEKE
>Mature_216_residues
MIDSVSPDQPNPRGRPKDPAKRTAILKAATALFLKHGFTGTSMDAVAKQAGVSKLTVYSHFSDKETLFSSAIETTCHNLL
PMPIFALEPHLSIRATLTKIGLAFLQLIHTPKVVELQRLMTSQATQDPAMSQLFFEAGPQRTVTAMENLVRKGNNIGLLQ
ADNPKQAAENFFSLLQGCEHMRVMIGCNAPMTASEAKPHAEQVVDMFLRAYGKEKE

Specific function: Potential Regulator Protein For The Acrab Genes. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23707; Mature: 23707

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDSVSPDQPNPRGRPKDPAKRTAILKAATALFLKHGFTGTSMDAVAKQAGVSKLTVYSH
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEEEC
FSDKETLFSSAIETTCHNLLPMPIFALEPHLSIRATLTKIGLAFLQLIHTPKVVELQRLM
CCHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
TSQATQDPAMSQLFFEAGPQRTVTAMENLVRKGNNIGLLQADNPKQAAENFFSLLQGCEH
HHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHH
MRVMIGCNAPMTASEAKPHAEQVVDMFLRAYGKEKE
HEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MIDSVSPDQPNPRGRPKDPAKRTAILKAATALFLKHGFTGTSMDAVAKQAGVSKLTVYSH
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEEEC
FSDKETLFSSAIETTCHNLLPMPIFALEPHLSIRATLTKIGLAFLQLIHTPKVVELQRLM
CCHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
TSQATQDPAMSQLFFEAGPQRTVTAMENLVRKGNNIGLLQADNPKQAAENFFSLLQGCEH
HHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHH
MRVMIGCNAPMTASEAKPHAEQVVDMFLRAYGKEKE
HEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA