Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is 110835316

Identifier: 110835316

GI number: 110835316

Start: 2780130

End: 2781353

Strand: Direct

Name: 110835316

Synonym: ABO_2455

Alternate gene names: NA

Gene position: 2780130-2781353 (Clockwise)

Preceding gene: 110835315

Following gene: 110835320

Centisome position: 89.1

GC content: 55.96

Gene sequence:

>1224_bases
ATGAGCGACTTACTGCCCCGTATTCACCCAGACGATTACTGCAACGAAGACCTACCGACCCTCAGCCAACCCTGGTGGCA
AACGTTGCCGTCCAGCTTTCACAGCATGCCGGATCATTTCCTAGCAGATAACGATACCAGCTGGCGCATCAGCAGTACCG
CGGCTGTCGATACAGTGGCCCGTACCGGCCTGGCCTTAATGGCCGGCGTGGCTGCTCTGCCTGCCACGCTCAACGCCGCA
CGACTCAACGACGAGCGGGCGCTTACAGATTTCTATCGCCCCTTCCTAGCTGAGAGCGATCCCAATACTTTTTTCACACC
GCCCACCGTATCGGCAAAAATCAAGCACACGCCGGTATCCAGTTACCATTTTCAACCGGAAGACGGCGACGCCCATACCC
TACATTTCACTTCGCCTTTTGTGCCTAAAAACCCGGACCTAAGGGAGCGTTATCTGGACCATACCCGTAACGGCACCGCC
TGGGCGCAGCACTGGCGTCACCACGACGGCCCACGCCCTACACTGGTGATGATTCATGGGTTTGTGGCCGACCCTTACTG
GCTGAATACTCGCTGGCTGGCGCTGCCCTGGTTCTACAAGCAGGGCTTCGATGTGCTGCTCTATACGCTGCCGTTCCATG
GCCGGCGCAAAAGCCGTTTCGCTCCGTTCAGTGGCGCCGAGTTTTTCAGCCAAGGCATGGCGTTACTCAACGAAACCTTT
GCACACGCTATTCATGACTTGCGTTTGTTCATGCAAATGTTACGCGAACAAGGATCACCGGCCATCGGCGCCACCGGCAT
ATCACTGGGCGGTTACACTACTGGCTTACTGGCCGCACTAGAAAAAGACTTAGCCTTTGCGATCCCCAATGTGCCGTTGG
TCAGCGTGATTGATTTGATGAAGAGCTGGTTCCCGATCAACCAACAAGTGAAGCTGCTAAACCGCATCTATGACACCGAT
ACCGCAGGCCTTCGTGAAATCACCGCCCTGCACTCGCCCCTAACTTGGCCCTGCCAAATACCGCAAAGCGGGCGCATGAT
TATCGGCGGTGCCGGCGACCGATTCGCTCCTCCCAAACATAGTCACCTGTTACGCCAACACTGGAACAACTGTGATGTGC
ATTGGTTCCCAGGCAACCACCTGCTACATCTGGATCAAGGCTTATACCTGAAAGCCATGCGGGACTTTATGCGCCAGGCG
TTTGCCGCAAAAGGGGTGAGCTAA

Upstream 100 bases:

>100_bases
CAACCCTGGTTGAAGTTTTCGGCATTAATCATTGAACGTTTCTGTCATTGCTCTGCCGCCTTCAACCTTTTTTACTTGCG
TTTACTCACAAGGAGGTGGC

Downstream 100 bases:

>100_bases
GCACCGGAAGCCCGCAAACACCACTTGTTTTATAGGAGCACGTGGCTTTCGCGTGGCAAACCAGACTCGGCGTCCTAGCG
GCTTCGATGAAAATGCTAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 407; Mature: 406

Protein sequence:

>407_residues
MSDLLPRIHPDDYCNEDLPTLSQPWWQTLPSSFHSMPDHFLADNDTSWRISSTAAVDTVARTGLALMAGVAALPATLNAA
RLNDERALTDFYRPFLAESDPNTFFTPPTVSAKIKHTPVSSYHFQPEDGDAHTLHFTSPFVPKNPDLRERYLDHTRNGTA
WAQHWRHHDGPRPTLVMIHGFVADPYWLNTRWLALPWFYKQGFDVLLYTLPFHGRRKSRFAPFSGAEFFSQGMALLNETF
AHAIHDLRLFMQMLREQGSPAIGATGISLGGYTTGLLAALEKDLAFAIPNVPLVSVIDLMKSWFPINQQVKLLNRIYDTD
TAGLREITALHSPLTWPCQIPQSGRMIIGGAGDRFAPPKHSHLLRQHWNNCDVHWFPGNHLLHLDQGLYLKAMRDFMRQA
FAAKGVS

Sequences:

>Translated_407_residues
MSDLLPRIHPDDYCNEDLPTLSQPWWQTLPSSFHSMPDHFLADNDTSWRISSTAAVDTVARTGLALMAGVAALPATLNAA
RLNDERALTDFYRPFLAESDPNTFFTPPTVSAKIKHTPVSSYHFQPEDGDAHTLHFTSPFVPKNPDLRERYLDHTRNGTA
WAQHWRHHDGPRPTLVMIHGFVADPYWLNTRWLALPWFYKQGFDVLLYTLPFHGRRKSRFAPFSGAEFFSQGMALLNETF
AHAIHDLRLFMQMLREQGSPAIGATGISLGGYTTGLLAALEKDLAFAIPNVPLVSVIDLMKSWFPINQQVKLLNRIYDTD
TAGLREITALHSPLTWPCQIPQSGRMIIGGAGDRFAPPKHSHLLRQHWNNCDVHWFPGNHLLHLDQGLYLKAMRDFMRQA
FAAKGVS
>Mature_406_residues
SDLLPRIHPDDYCNEDLPTLSQPWWQTLPSSFHSMPDHFLADNDTSWRISSTAAVDTVARTGLALMAGVAALPATLNAAR
LNDERALTDFYRPFLAESDPNTFFTPPTVSAKIKHTPVSSYHFQPEDGDAHTLHFTSPFVPKNPDLRERYLDHTRNGTAW
AQHWRHHDGPRPTLVMIHGFVADPYWLNTRWLALPWFYKQGFDVLLYTLPFHGRRKSRFAPFSGAEFFSQGMALLNETFA
HAIHDLRLFMQMLREQGSPAIGATGISLGGYTTGLLAALEKDLAFAIPNVPLVSVIDLMKSWFPINQQVKLLNRIYDTDT
AGLREITALHSPLTWPCQIPQSGRMIIGGAGDRFAPPKHSHLLRQHWNNCDVHWFPGNHLLHLDQGLYLKAMRDFMRQAF
AAKGVS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019149 [H]

Pfam domain/function: PF09752 DUF2048 [H]

EC number: NA

Molecular weight: Translated: 46025; Mature: 45894

Theoretical pI: Translated: 7.43; Mature: 7.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDLLPRIHPDDYCNEDLPTLSQPWWQTLPSSFHSMPDHFLADNDTSWRISSTAAVDTVA
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHCCCCCCCEEEECHHHHHHHH
RTGLALMAGVAALPATLNAARLNDERALTDFYRPFLAESDPNTFFTPPTVSAKIKHTPVS
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEECCCCCCEEEEECCCC
SYHFQPEDGDAHTLHFTSPFVPKNPDLRERYLDHTRNGTAWAQHWRHHDGPRPTLVMIHG
CCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEEE
FVADPYWLNTRWLALPWFYKQGFDVLLYTLPFHGRRKSRFAPFSGAEFFSQGMALLNETF
EECCCEEECCEEEEECHHHHCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
AHAIHDLRLFMQMLREQGSPAIGATGISLGGYTTGLLAALEKDLAFAIPNVPLVSVIDLM
HHHHHHHHHHHHHHHHCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
KSWFPINQQVKLLNRIYDTDTAGLREITALHSPLTWPCQIPQSGRMIIGGAGDRFAPPKH
HHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCHH
SHLLRQHWNNCDVHWFPGNHLLHLDQGLYLKAMRDFMRQAFAAKGVS
HHHHHHHCCCCCEEEECCCEEEEECCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SDLLPRIHPDDYCNEDLPTLSQPWWQTLPSSFHSMPDHFLADNDTSWRISSTAAVDTVA
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHCCCCCCCEEEECHHHHHHHH
RTGLALMAGVAALPATLNAARLNDERALTDFYRPFLAESDPNTFFTPPTVSAKIKHTPVS
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEECCCCCCEEEEECCCC
SYHFQPEDGDAHTLHFTSPFVPKNPDLRERYLDHTRNGTAWAQHWRHHDGPRPTLVMIHG
CCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEEE
FVADPYWLNTRWLALPWFYKQGFDVLLYTLPFHGRRKSRFAPFSGAEFFSQGMALLNETF
EECCCEEECCEEEEECHHHHCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
AHAIHDLRLFMQMLREQGSPAIGATGISLGGYTTGLLAALEKDLAFAIPNVPLVSVIDLM
HHHHHHHHHHHHHHHHCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
KSWFPINQQVKLLNRIYDTDTAGLREITALHSPLTWPCQIPQSGRMIIGGAGDRFAPPKH
HHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCHH
SHLLRQHWNNCDVHWFPGNHLLHLDQGLYLKAMRDFMRQAFAAKGVS
HHHHHHHCCCCCEEEECCCEEEEECCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]