| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is est [H]
Identifier: 110835315
GI number: 110835315
Start: 2779097
End: 2779987
Strand: Direct
Name: est [H]
Synonym: ABO_2454
Alternate gene names: 110835315
Gene position: 2779097-2779987 (Clockwise)
Preceding gene: 110835314
Following gene: 110835316
Centisome position: 89.07
GC content: 56.57
Gene sequence:
>891_bases ATGAGCCTTCAAGCCCGCCTCATCAAAGCCGTGACCAAGCGCACCATCAAACGCTCCGGTCTCAACCAAGACCAACTAGT ACGGCATCTGCGTAAGGTATTCAACGAAACCCCTGTTCTGACCCTATTACCCCGTGGAGTAAAACTCAGTCGCGTGGAGC ACCCCGCTTTTACCGGTGATCGAATCAGCGTGCAGCGTCCAGAAATGGCGGTGCTTTACCTGCATGGCGGCGCCTACATT GGCGGCATCACCAAGACCTACCACAACTTAGCCGGGCGGTTGGCAAAAAAATTAAACGCTGAGGTATTTTTACCCGTCTA TCCGTTTGCCCCAGAGCATCCTTACCCGGCCGCAGTGAATCGAGTCATGGAGGCCTACGAATACCTATTAAGCCTAGGCA AGCAACCGCAGGATATCGTTATTGCCGGCGATTCCGCCGGTGGTGGGCTCACCTTGGCCACGCTGCTGCATATCCGCGAC AAAGGCCTGGAACAACCCCGCTGCGCGGTGACATTTTCGCCCGCCAGCAACGCCTTTCCTGACGACAGTATCCTGGAGGC CCTAGACCCCAGCGATGCGATGCTGTCTGCAGACATCATTCGCACTGCTATCGAGATCTATACCCCCAACCCAGAAGACC GCAGCCAGCCCTACGCCTCCCCCTGCCTAGGAGACTACACCAACATCTGCCCGCTACTGATCACCGCCAGCACCGACGAA CTGCTTTATGCGGATGGCAAGCGAGTGAAGCGCGTGGCGGAAAAGGCGGGCGTCAAGGTGACATGGATAGAGCGCCCCGG CGTATTCCATGTATGGCCGGTCATGGTGCCCTTCCTGCCAGAGGCGAACAAAGACCTGAAACGGATTGTCGCATTCATTA AAGAAGCATAG
Upstream 100 bases:
>100_bases GGCCAGTGCCAACTGGCCCGATCAACCCTGCCAATACGCCCCCTCACTCGCTAGTGTTGGGGCGCCATAACACAACAACG AACCAGATAACGGACAAACT
Downstream 100 bases:
>100_bases GCGCGAGCGCTTAAGGCGATAAAAACCAAGCCCGCAGTGCTCCAACCCTGGTTGAAGTTTTCGGCATTAATCATTGAACG TTTCTGTCATTGCTCTGCCG
Product: lipase/esterase
Products: alcohol; a carboxylate [C]
Alternate protein names: NA
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MSLQARLIKAVTKRTIKRSGLNQDQLVRHLRKVFNETPVLTLLPRGVKLSRVEHPAFTGDRISVQRPEMAVLYLHGGAYI GGITKTYHNLAGRLAKKLNAEVFLPVYPFAPEHPYPAAVNRVMEAYEYLLSLGKQPQDIVIAGDSAGGGLTLATLLHIRD KGLEQPRCAVTFSPASNAFPDDSILEALDPSDAMLSADIIRTAIEIYTPNPEDRSQPYASPCLGDYTNICPLLITASTDE LLYADGKRVKRVAEKAGVKVTWIERPGVFHVWPVMVPFLPEANKDLKRIVAFIKEA
Sequences:
>Translated_296_residues MSLQARLIKAVTKRTIKRSGLNQDQLVRHLRKVFNETPVLTLLPRGVKLSRVEHPAFTGDRISVQRPEMAVLYLHGGAYI GGITKTYHNLAGRLAKKLNAEVFLPVYPFAPEHPYPAAVNRVMEAYEYLLSLGKQPQDIVIAGDSAGGGLTLATLLHIRD KGLEQPRCAVTFSPASNAFPDDSILEALDPSDAMLSADIIRTAIEIYTPNPEDRSQPYASPCLGDYTNICPLLITASTDE LLYADGKRVKRVAEKAGVKVTWIERPGVFHVWPVMVPFLPEANKDLKRIVAFIKEA >Mature_295_residues SLQARLIKAVTKRTIKRSGLNQDQLVRHLRKVFNETPVLTLLPRGVKLSRVEHPAFTGDRISVQRPEMAVLYLHGGAYIG GITKTYHNLAGRLAKKLNAEVFLPVYPFAPEHPYPAAVNRVMEAYEYLLSLGKQPQDIVIAGDSAGGGLTLATLLHIRDK GLEQPRCAVTFSPASNAFPDDSILEALDPSDAMLSADIIRTAIEIYTPNPEDRSQPYASPCLGDYTNICPLLITASTDEL LYADGKRVKRVAEKAGVKVTWIERPGVFHVWPVMVPFLPEANKDLKRIVAFIKEA
Specific function: Has An Esterase Activity. Triacetyl Glycerol (Triacetin) Is A Substrate Of The Enzyme. [C]
COG id: COG0657
COG function: function code I; Esterase/lipase
Gene ontology:
Cell location: Secreted (Potential). Note=External to the cytoplasmic membrane [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 'GDXG' lipolytic enzyme family [H]
Homologues:
Organism=Caenorhabditis elegans, GI115533410, Length=124, Percent_Identity=31.4516129032258, Blast_Score=65, Evalue=5e-11, Organism=Caenorhabditis elegans, GI115533412, Length=124, Percent_Identity=31.4516129032258, Blast_Score=64, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013094 - InterPro: IPR002168 [H]
Pfam domain/function: PF07859 Abhydrolase_3 [H]
EC number: 3.1.1.- [C]
Molecular weight: Translated: 32707; Mature: 32576
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLQARLIKAVTKRTIKRSGLNQDQLVRHLRKVFNETPVLTLLPRGVKLSRVEHPAFTGD CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCCEEEECCCCCCCCC RISVQRPEMAVLYLHGGAYIGGITKTYHNLAGRLAKKLNAEVFLPVYPFAPEHPYPAAVN CEEEECCCEEEEEEECCEEECHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHH RVMEAYEYLLSLGKQPQDIVIAGDSAGGGLTLATLLHIRDKGLEQPRCAVTFSPASNAFP HHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCC DDSILEALDPSDAMLSADIIRTAIEIYTPNPEDRSQPYASPCLGDYTNICPLLITASTDE CHHHHHHCCCCHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCHHCCCCEEEECCCCC LLYADGKRVKRVAEKAGVKVTWIERPGVFHVWPVMVPFLPEANKDLKRIVAFIKEA EEECCCHHHHHHHHHCCCEEEEEECCCEEEEHHHHHCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure SLQARLIKAVTKRTIKRSGLNQDQLVRHLRKVFNETPVLTLLPRGVKLSRVEHPAFTGD CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCCEEEECCCCCCCCC RISVQRPEMAVLYLHGGAYIGGITKTYHNLAGRLAKKLNAEVFLPVYPFAPEHPYPAAVN CEEEECCCEEEEEEECCEEECHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHH RVMEAYEYLLSLGKQPQDIVIAGDSAGGGLTLATLLHIRDKGLEQPRCAVTFSPASNAFP HHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCC DDSILEALDPSDAMLSADIIRTAIEIYTPNPEDRSQPYASPCLGDYTNICPLLITASTDE CHHHHHHCCCCHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCHHCCCCEEEECCCCC LLYADGKRVKRVAEKAGVKVTWIERPGVFHVWPVMVPFLPEANKDLKRIVAFIKEA EEECCCHHHHHHHHHCCCEEEEEECCCEEEEHHHHHCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Carboxylic ester; H2O [C]
Specific reaction: Carboxylic ester + H2O = an alcohol + carboxylate [C]
General reaction: Hydrolase; Acting on ester bonds; Carboxylic ester hydrolases [C]
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2545531 [H]