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The map label for this gene is spr [H]

Identifier: 110834902

GI number: 110834902

Start: 2329394

End: 2329996

Strand: Reverse

Name: spr [H]

Synonym: ABO_2041

Alternate gene names: 110834902

Gene position: 2329996-2329394 (Counterclockwise)

Preceding gene: 110834903

Following gene: 110834900

Centisome position: 74.68

GC content: 59.54

Gene sequence:

>603_bases
ATGGTCATAATGTTGCCTTATCCCTCCATGCGCTACGCCATTCCTTCACTTTGTTGTTTGCTGCTCCTGCTGGCCGGTTG
TGCCGGCAGGGCCCCGGCTGGCGCGCCTCCATCCGTGCAAACCCCTGTTGCTCCCACTCGCTCGGCAACTGTCGGCACCG
CACCGGATCTCCAAGCCCAGCAGGAACTGGATGCGCTAGTGGCGCAAGTAATGTCCGAAGCGCCCCCGCCCCCATTGCTT
ATGTCACTGGAAGCTCAGCACGAAGACTGGAAAGGTGTCCCCTATCGTTACGGTGGTCTGAGCCCCCGCGGCGTGGACTG
CTCCGGCTTCGTCTACCTCACCTTTCAGTCGCGCTTGGGTATGGAAGTCCCGCGCACCACCCTTGAGCTGCTGAAAAGCG
GGAAAAAGGTAAAGCGCGGTGACATTCGTGTGGGTGACCTGGTGTTCTTCCGCACTGGGCCTGGCAATCGCCATGTGGGA
ATTTACATGGGGGGCGATGAATTTATGCATGCGTCGGTGAGTAAGGGGGTGATGCAGTCGTCGCTGCACAACCCCTATTG
GAGTCAGCGCTATTGGCAGGCTCGGCGGTTGGTGAATCGGTAG

Upstream 100 bases:

>100_bases
TCGGCCATCTTCGGTAAAGAAAATTACGCCGCCGTTATCCAGCAAATGCGCGATGAGCTGGCGCAGGCTTAACGGCCTAG
GGCGCTCAGGAGGGAACCGA

Downstream 100 bases:

>100_bases
CACACGTTCGATATTACTCTTAAGAAATCCCCCGGATTCCCAGCGTCTCCCGAAATCACAGCCAAGACTAAACCCGCTAG
AAAAGCGCGCGCCCCTTGCC

Product: NLP/P60 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MVIMLPYPSMRYAIPSLCCLLLLLAGCAGRAPAGAPPSVQTPVAPTRSATVGTAPDLQAQQELDALVAQVMSEAPPPPLL
MSLEAQHEDWKGVPYRYGGLSPRGVDCSGFVYLTFQSRLGMEVPRTTLELLKSGKKVKRGDIRVGDLVFFRTGPGNRHVG
IYMGGDEFMHASVSKGVMQSSLHNPYWSQRYWQARRLVNR

Sequences:

>Translated_200_residues
MVIMLPYPSMRYAIPSLCCLLLLLAGCAGRAPAGAPPSVQTPVAPTRSATVGTAPDLQAQQELDALVAQVMSEAPPPPLL
MSLEAQHEDWKGVPYRYGGLSPRGVDCSGFVYLTFQSRLGMEVPRTTLELLKSGKKVKRGDIRVGDLVFFRTGPGNRHVG
IYMGGDEFMHASVSKGVMQSSLHNPYWSQRYWQARRLVNR
>Mature_200_residues
MVIMLPYPSMRYAIPSLCCLLLLLAGCAGRAPAGAPPSVQTPVAPTRSATVGTAPDLQAQQELDALVAQVMSEAPPPPLL
MSLEAQHEDWKGVPYRYGGLSPRGVDCSGFVYLTFQSRLGMEVPRTTLELLKSGKKVKRGDIRVGDLVFFRTGPGNRHVG
IYMGGDEFMHASVSKGVMQSSLHNPYWSQRYWQARRLVNR

Specific function: Unknown

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpC/p60 family [H]

Homologues:

Organism=Escherichia coli, GI1788501, Length=196, Percent_Identity=40.8163265306122, Blast_Score=155, Evalue=2e-39,
Organism=Escherichia coli, GI1788001, Length=135, Percent_Identity=47.4074074074074, Blast_Score=135, Evalue=2e-33,
Organism=Escherichia coli, GI1787944, Length=113, Percent_Identity=40.7079646017699, Blast_Score=87, Evalue=6e-19,
Organism=Escherichia coli, GI1786421, Length=113, Percent_Identity=32.7433628318584, Blast_Score=68, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064 [H]

Pfam domain/function: PF00877 NLPC_P60 [H]

EC number: NA

Molecular weight: Translated: 21917; Mature: 21917

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVIMLPYPSMRYAIPSLCCLLLLLAGCAGRAPAGAPPSVQTPVAPTRSATVGTAPDLQAQ
CEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
QELDALVAQVMSEAPPPPLLMSLEAQHEDWKGVPYRYGGLSPRGVDCSGFVYLTFQSRLG
HHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEECCCCCCCCCCCCCEEEEEEECCCC
MEVPRTTLELLKSGKKVKRGDIRVGDLVFFRTGPGNRHVGIYMGGDEFMHASVSKGVMQS
CCCCHHHHHHHHCCCCCCCCCEEEEEEEEEEECCCCCEEEEEECCHHHHHHHHHHHHHHH
SLHNPYWSQRYWQARRLVNR
HHCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVIMLPYPSMRYAIPSLCCLLLLLAGCAGRAPAGAPPSVQTPVAPTRSATVGTAPDLQAQ
CEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
QELDALVAQVMSEAPPPPLLMSLEAQHEDWKGVPYRYGGLSPRGVDCSGFVYLTFQSRLG
HHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEECCCCCCCCCCCCCEEEEEEECCCC
MEVPRTTLELLKSGKKVKRGDIRVGDLVFFRTGPGNRHVGIYMGGDEFMHASVSKGVMQS
CCCCHHHHHHHHCCCCCCCCCEEEEEEEEEEECCCCCEEEEEECCHHHHHHHHHHHHHHH
SLHNPYWSQRYWQARRLVNR
HHCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]