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The map label for this gene is rpe [H]

Identifier: 110834903

GI number: 110834903

Start: 2330025

End: 2330699

Strand: Reverse

Name: rpe [H]

Synonym: ABO_2042

Alternate gene names: 110834903

Gene position: 2330699-2330025 (Counterclockwise)

Preceding gene: 110834904

Following gene: 110834902

Centisome position: 74.7

GC content: 59.7

Gene sequence:

>675_bases
ATGCCCAAGCAGGACTATCTGATCGCCCCCTCCATCCTTGCCGCCAACTTTGCCCGTTTAGGCGAAGAGTGCGATGCGGT
GCTGGCGGCCGGCGCCGATGTGATCCATTTTGATGTGATGGACAACCATTACGTGCCTAACCTGACCATCGGCCCCATGG
TCTGCAAGGCCCTGCGCGACCACGGCATCACCGCCCCCATCGACGTGCACCTTATGGTCAGCCCGGTGGATGAATTGATC
AGCATGTTCGCCGAAGCCGGGGCCAGCTACATCACCTTTCACCCGGAAGCCAGCCAGCACGTGGACCGTTCCCTGCAGCT
GATTAAGAGCTATGGTTGCAAGGCTGGGCTGGTGCTCAACCCGGCGACACGCCCGGATTGCCTGGAATACGTGATGGACA
AGCTGGATATGATCCTGCTGATGAGTGTGAACCCGGGCTATGGCGGCCAGACGTTTATCCCCTCTACCTTGGATAAAACC
CGCGCTGTGCGCCAACTGATCGACGCTAGCGGCTACGACATCCGCCTGGAAGTGGACGGCGGCGTCTCTGAAAAGAACAT
CCGCGAAGTGGCCGCTGCCGGCGCCGATACCTTCGTGGCCGGCTCGGCCATCTTCGGTAAAGAAAATTACGCCGCCGTTA
TCCAGCAAATGCGCGATGAGCTGGCGCAGGCTTAA

Upstream 100 bases:

>100_bases
CGGCACATGATCCAGTGCTGAAATTGATTGTTTTGTGAGATCGGTGCAATCACCGCTCCACAGTGACGCTGTCACAACAC
ATGCATTTTAAGGAATTGTC

Downstream 100 bases:

>100_bases
CGGCCTAGGGCGCTCAGGAGGGAACCGAATGGTCATAATGTTGCCTTATCCCTCCATGCGCTACGCCATTCCTTCACTTT
GTTGTTTGCTGCTCCTGCTG

Product: ribulose-phosphate 3-epimerase

Products: NA

Alternate protein names: Pentose-5-phosphate 3-epimerase; PPE; R5P3E [H]

Number of amino acids: Translated: 224; Mature: 223

Protein sequence:

>224_residues
MPKQDYLIAPSILAANFARLGEECDAVLAAGADVIHFDVMDNHYVPNLTIGPMVCKALRDHGITAPIDVHLMVSPVDELI
SMFAEAGASYITFHPEASQHVDRSLQLIKSYGCKAGLVLNPATRPDCLEYVMDKLDMILLMSVNPGYGGQTFIPSTLDKT
RAVRQLIDASGYDIRLEVDGGVSEKNIREVAAAGADTFVAGSAIFGKENYAAVIQQMRDELAQA

Sequences:

>Translated_224_residues
MPKQDYLIAPSILAANFARLGEECDAVLAAGADVIHFDVMDNHYVPNLTIGPMVCKALRDHGITAPIDVHLMVSPVDELI
SMFAEAGASYITFHPEASQHVDRSLQLIKSYGCKAGLVLNPATRPDCLEYVMDKLDMILLMSVNPGYGGQTFIPSTLDKT
RAVRQLIDASGYDIRLEVDGGVSEKNIREVAAAGADTFVAGSAIFGKENYAAVIQQMRDELAQA
>Mature_223_residues
PKQDYLIAPSILAANFARLGEECDAVLAAGADVIHFDVMDNHYVPNLTIGPMVCKALRDHGITAPIDVHLMVSPVDELIS
MFAEAGASYITFHPEASQHVDRSLQLIKSYGCKAGLVLNPATRPDCLEYVMDKLDMILLMSVNPGYGGQTFIPSTLDKTR
AVRQLIDASGYDIRLEVDGGVSEKNIREVAAAGADTFVAGSAIFGKENYAAVIQQMRDELAQA

Specific function: Unknown

COG id: COG0036

COG function: function code G; Pentose-5-phosphate-3-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribulose-phosphate 3-epimerase family [H]

Homologues:

Organism=Homo sapiens, GI40385883, Length=218, Percent_Identity=38.5321100917431, Blast_Score=153, Evalue=1e-37,
Organism=Homo sapiens, GI219879828, Length=218, Percent_Identity=36.697247706422, Blast_Score=142, Evalue=2e-34,
Organism=Homo sapiens, GI24307923, Length=174, Percent_Identity=31.0344827586207, Blast_Score=89, Evalue=4e-18,
Organism=Escherichia coli, GI1789788, Length=220, Percent_Identity=73.6363636363636, Blast_Score=333, Evalue=5e-93,
Organism=Escherichia coli, GI1790523, Length=210, Percent_Identity=35.7142857142857, Blast_Score=145, Evalue=2e-36,
Organism=Escherichia coli, GI1790754, Length=211, Percent_Identity=29.8578199052133, Blast_Score=97, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17552948, Length=223, Percent_Identity=39.4618834080717, Blast_Score=152, Evalue=1e-37,
Organism=Saccharomyces cerevisiae, GI6322341, Length=229, Percent_Identity=39.3013100436681, Blast_Score=162, Evalue=5e-41,
Organism=Drosophila melanogaster, GI24586301, Length=219, Percent_Identity=38.8127853881278, Blast_Score=153, Evalue=7e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000056
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00834 Ribul_P_3_epim [H]

EC number: =5.1.3.1 [H]

Molecular weight: Translated: 24200; Mature: 24069

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: PS01085 RIBUL_P_3_EPIMER_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKQDYLIAPSILAANFARLGEECDAVLAAGADVIHFDVMDNHYVPNLTIGPMVCKALRD
CCCCCCEECHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHH
HGITAPIDVHLMVSPVDELISMFAEAGASYITFHPEASQHVDRSLQLIKSYGCKAGLVLN
CCCCCCEEEEEEECCHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCEEEC
PATRPDCLEYVMDKLDMILLMSVNPGYGGQTFIPSTLDKTRAVRQLIDASGYDIRLEVDG
CCCCHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECC
GVSEKNIREVAAAGADTFVAGSAIFGKENYAAVIQQMRDELAQA
CCCHHHHHHHHHCCCCHHEECCEEECCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PKQDYLIAPSILAANFARLGEECDAVLAAGADVIHFDVMDNHYVPNLTIGPMVCKALRD
CCCCCEECHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHH
HGITAPIDVHLMVSPVDELISMFAEAGASYITFHPEASQHVDRSLQLIKSYGCKAGLVLN
CCCCCCEEEEEEECCHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCEEEC
PATRPDCLEYVMDKLDMILLMSVNPGYGGQTFIPSTLDKTRAVRQLIDASGYDIRLEVDG
CCCCHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECC
GVSEKNIREVAAAGADTFVAGSAIFGKENYAAVIQQMRDELAQA
CCCHHHHHHHHHCCCCHHEECCEEECCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]