| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is lipH [H]
Identifier: 110834837
GI number: 110834837
Start: 2254437
End: 2255447
Strand: Direct
Name: lipH [H]
Synonym: ABO_1976
Alternate gene names: 110834837
Gene position: 2254437-2255447 (Clockwise)
Preceding gene: 110834836
Following gene: 110834847
Centisome position: 72.25
GC content: 50.94
Gene sequence:
>1011_bases ATGACACGAACATTTGTTCTACTTATCGCAATAGTGCTCTCAGCTAGCAGCTTATTCTGGGGCTTTCAGCACCTAACTGC TTCCCCTCTTCCGCTACCCACAGCGAGTAACACGAACACCCAAATCAGCACCACTTACACTGCCACAATTGAAGCGGGAA GAGCAGCTAAGCAGACGCTAAATCTAGCCCAAATGCTGACAAATACTTCGTTAGCGGGCACGCAAGTCCCTGGAAGTCTA ACGATCGATGCCCTGGGCCGCCTGATTCCAGACAACCACAGCAAAGCTGTCATGGATTATTTCTTATCTTTGAGTGGAGA AATGCCTGACGCGTCAATCCGCAGACTGCTGGAACACTGGGCCCGACACAACGCGGGGCAACTTGCCGCCGCTGACTTGC TGACACTGTTTGATCAATATCATTATTATCGGTCCCGATTAGCTAACAGCGATTACGCCGCACATTATTTGAATAAGAAC AGCGGGGATATTCGCAACAAGCTTGAACAACGACAAAAACTGCGCAATGACACATTTGGGACCGATATAGCTGCAGCTTT GTTCGCAGATGAGGACCGCTACGATAGGGTCAGTTTGCAGCGCAACCAGATCCTGACATCGCGTCGTTCTGAGAAAGAAA AGGCTGACGCCCTGCAAGAGCTTCGCAAGGCGCTACCCGAAGCCTTGGCAAAACAACACCAGCGGCAGTACGATTTGCAA CGCCTCACAGCCCATGAGCAATCCATAAAACAACAAGGCGCTAATGCCGCCGATCTCTATGCTTTCCGCCAACGCCAATT TGGTGATGCTGCGGCCCTGCGTCTGCAGGCGTTAGATGAGCAACGTACCCTTTGGCAAAGTCAGTACCAGAATTACGCGC GACAGCGAGACCAGATCAATTCCGCAGCCATAGACATTGCGGACAAACAGAAGCAGTTACAGGCTTTGCGTAGCAGATTA TTTACCCACAGTGAACAACAGCGTGCAGCCGCGTTAGACCGTATGCAATAG
Upstream 100 bases:
>100_bases TATATCGCAACCACGCTAACCGCCTGAAAAATGCAGGACTTTAACAAGCATTCCCTCAGAGGGTCGCTCTTTACAGGACC CTCTGCATTGAGTCTGAGTC
Downstream 100 bases:
>100_bases CCAACATAGATAGAAGAAACATCGTCAAACTAGCTCCTTGCGGTTGTTTCGCTGAGACCGTCTGAGCACGGTAAAAATAA TCCCATTCAAGCTTTCCCTC
Product: lipase foldase
Products: NA
Alternate protein names: Lipase activator protein; Lipase foldase; Lipase helper protein; Lipase modulator [H]
Number of amino acids: Translated: 336; Mature: 335
Protein sequence:
>336_residues MTRTFVLLIAIVLSASSLFWGFQHLTASPLPLPTASNTNTQISTTYTATIEAGRAAKQTLNLAQMLTNTSLAGTQVPGSL TIDALGRLIPDNHSKAVMDYFLSLSGEMPDASIRRLLEHWARHNAGQLAAADLLTLFDQYHYYRSRLANSDYAAHYLNKN SGDIRNKLEQRQKLRNDTFGTDIAAALFADEDRYDRVSLQRNQILTSRRSEKEKADALQELRKALPEALAKQHQRQYDLQ RLTAHEQSIKQQGANAADLYAFRQRQFGDAAALRLQALDEQRTLWQSQYQNYARQRDQINSAAIDIADKQKQLQALRSRL FTHSEQQRAAALDRMQ
Sequences:
>Translated_336_residues MTRTFVLLIAIVLSASSLFWGFQHLTASPLPLPTASNTNTQISTTYTATIEAGRAAKQTLNLAQMLTNTSLAGTQVPGSL TIDALGRLIPDNHSKAVMDYFLSLSGEMPDASIRRLLEHWARHNAGQLAAADLLTLFDQYHYYRSRLANSDYAAHYLNKN SGDIRNKLEQRQKLRNDTFGTDIAAALFADEDRYDRVSLQRNQILTSRRSEKEKADALQELRKALPEALAKQHQRQYDLQ RLTAHEQSIKQQGANAADLYAFRQRQFGDAAALRLQALDEQRTLWQSQYQNYARQRDQINSAAIDIADKQKQLQALRSRL FTHSEQQRAAALDRMQ >Mature_335_residues TRTFVLLIAIVLSASSLFWGFQHLTASPLPLPTASNTNTQISTTYTATIEAGRAAKQTLNLAQMLTNTSLAGTQVPGSLT IDALGRLIPDNHSKAVMDYFLSLSGEMPDASIRRLLEHWARHNAGQLAAADLLTLFDQYHYYRSRLANSDYAAHYLNKNS GDIRNKLEQRQKLRNDTFGTDIAAALFADEDRYDRVSLQRNQILTSRRSEKEKADALQELRKALPEALAKQHQRQYDLQR LTAHEQSIKQQGANAADLYAFRQRQFGDAAALRLQALDEQRTLWQSQYQNYARQRDQINSAAIDIADKQKQLQALRSRLF THSEQQRAAALDRMQ
Specific function: May be involved in the folding of the extracellular lipase during its passage through the periplasm [H]
COG id: COG5380
COG function: function code O; Lipase chaperone
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein; Periplasmic side [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lipase chaperone family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004961 [H]
Pfam domain/function: PF03280 Lipase_chap [H]
EC number: NA
Molecular weight: Translated: 38048; Mature: 37917
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRTFVLLIAIVLSASSLFWGFQHLTASPLPLPTASNTNTQISTTYTATIEAGRAAKQTL CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEHHHHHHHHHHH NLAQMLTNTSLAGTQVPGSLTIDALGRLIPDNHSKAVMDYFLSLSGEMPDASIRRLLEHW HHHHHHHCCCCCCCCCCCCEEHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHH ARHNAGQLAAADLLTLFDQYHYYRSRLANSDYAAHYLNKNSGDIRNKLEQRQKLRNDTFG HHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCC TDIAAALFADEDRYDRVSLQRNQILTSRRSEKEKADALQELRKALPEALAKQHQRQYDLQ HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLTAHEQSIKQQGANAADLYAFRQRQFGDAAALRLQALDEQRTLWQSQYQNYARQRDQIN HHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAAIDIADKQKQLQALRSRLFTHSEQQRAAALDRMQ HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC >Mature Secondary Structure TRTFVLLIAIVLSASSLFWGFQHLTASPLPLPTASNTNTQISTTYTATIEAGRAAKQTL CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEHHHHHHHHHHH NLAQMLTNTSLAGTQVPGSLTIDALGRLIPDNHSKAVMDYFLSLSGEMPDASIRRLLEHW HHHHHHHCCCCCCCCCCCCEEHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHH ARHNAGQLAAADLLTLFDQYHYYRSRLANSDYAAHYLNKNSGDIRNKLEQRQKLRNDTFG HHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCC TDIAAALFADEDRYDRVSLQRNQILTSRRSEKEKADALQELRKALPEALAKQHQRQYDLQ HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLTAHEQSIKQQGANAADLYAFRQRQFGDAAALRLQALDEQRTLWQSQYQNYARQRDQIN HHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAAIDIADKQKQLQALRSRLFTHSEQQRAAALDRMQ HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10216267 [H]