Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is nadD [H]

Identifier: 110834813

GI number: 110834813

Start: 2232731

End: 2233408

Strand: Direct

Name: nadD [H]

Synonym: ABO_1952

Alternate gene names: 110834813

Gene position: 2232731-2233408 (Clockwise)

Preceding gene: 110834812

Following gene: 110834814

Centisome position: 71.56

GC content: 58.55

Gene sequence:

>678_bases
TTGCATAACGTCCAACATGCGGCGTCCGGCGGCCGGCCTTTGGTTCTCTTTGGCGGCACCTTTGATCCGGTTCACCGGGC
GCACATCAGTGCGGCCCGAGCTGTATCTAAGGTGCTCAATGACGCCCCTGTGCACCTGCTCCCTAATGCGGTTCCCCCTC
ACCGGCCGCAACCGTTGGCCGATGGTGAGCAGCGCTTGCGTATGCTGGAGCTGGCCTGTGCTGACCACCCACAGTTGCAC
CCGGATGGTTGGGAATTGGCACAGCCCGGCCCCAGCTACAGCCTGGTCACACTGCAGCATTTTCGCAAACAACACCCAGA
CCGGCCGCTCGTGTTTATGATCGGCGCCGACAGCTTTGCCAACCTGCATCAGTGGCACCAATGGCGAGATTACACCAACC
TGTGTCACCTGGCAGTGGTACCTCGCCCAAACAGCCCGCTGGCAGATAATGCCGTCTTAGAGGCGTTTCCAGAAACCGAT
GCCCACGGCCTGGCACAGCAACCCTACGGCTTACGACTAATGCTCAAACGCCCATTTCTGGATGTCTCTGCCACCGCCAT
TCGTCAGGCGCTCGCAAAAAAAGGGCACTGTCCCGCGTTAGATGACGCCGTGATTACGCATATTCACCGCCACGACCTGT
ATAATGTGGCCGAACATACCCCTTTTAACCAATCATGA

Upstream 100 bases:

>100_bases
TGACCAGCCAGAAATGGGTGGTGTTGGGTGATGGGCATATACGGCTGTAAACGCCAGATGCAGGATGCCGGATACCTAAC
GCCAAACACGGAGGCGTGCT

Downstream 100 bases:

>100_bases
GGCCCCATGAGCGCTGACACTCCGCTACTGCAACTGGTCATCGACGCCCTGGAAGAAGTCAAAGCCCAAAACATCACCCC
GCTGGATGTACGTGAAATCA

Product: nicotinate-nucleotide adenylyltransferase

Products: NA

Alternate protein names: Deamido-NAD(+) diphosphorylase; Deamido-NAD(+) pyrophosphorylase; Nicotinate mononucleotide adenylyltransferase; NaMN adenylyltransferase [H]

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MHNVQHAASGGRPLVLFGGTFDPVHRAHISAARAVSKVLNDAPVHLLPNAVPPHRPQPLADGEQRLRMLELACADHPQLH
PDGWELAQPGPSYSLVTLQHFRKQHPDRPLVFMIGADSFANLHQWHQWRDYTNLCHLAVVPRPNSPLADNAVLEAFPETD
AHGLAQQPYGLRLMLKRPFLDVSATAIRQALAKKGHCPALDDAVITHIHRHDLYNVAEHTPFNQS

Sequences:

>Translated_225_residues
MHNVQHAASGGRPLVLFGGTFDPVHRAHISAARAVSKVLNDAPVHLLPNAVPPHRPQPLADGEQRLRMLELACADHPQLH
PDGWELAQPGPSYSLVTLQHFRKQHPDRPLVFMIGADSFANLHQWHQWRDYTNLCHLAVVPRPNSPLADNAVLEAFPETD
AHGLAQQPYGLRLMLKRPFLDVSATAIRQALAKKGHCPALDDAVITHIHRHDLYNVAEHTPFNQS
>Mature_225_residues
MHNVQHAASGGRPLVLFGGTFDPVHRAHISAARAVSKVLNDAPVHLLPNAVPPHRPQPLADGEQRLRMLELACADHPQLH
PDGWELAQPGPSYSLVTLQHFRKQHPDRPLVFMIGADSFANLHQWHQWRDYTNLCHLAVVPRPNSPLADNAVLEAFPETD
AHGLAQQPYGLRLMLKRPFLDVSATAIRQALAKKGHCPALDDAVITHIHRHDLYNVAEHTPFNQS

Specific function: Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) [H]

COG id: COG1057

COG function: function code H; Nicotinic acid mononucleotide adenylyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nadD family [H]

Homologues:

Organism=Escherichia coli, GI1786858, Length=206, Percent_Identity=38.8349514563107, Blast_Score=134, Evalue=5e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004821
- InterPro:   IPR004820
- InterPro:   IPR005248
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01467 CTP_transf_2 [H]

EC number: =2.7.7.18 [H]

Molecular weight: Translated: 25036; Mature: 25036

Theoretical pI: Translated: 7.59; Mature: 7.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHNVQHAASGGRPLVLFGGTFDPVHRAHISAARAVSKVLNDAPVHLLPNAVPPHRPQPLA
CCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCC
DGEQRLRMLELACADHPQLHPDGWELAQPGPSYSLVTLQHFRKQHPDRPLVFMIGADSFA
CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHCCCCCEEEEECCCHHH
NLHQWHQWRDYTNLCHLAVVPRPNSPLADNAVLEAFPETDAHGLAQQPYGLRLMLKRPFL
HHHHHHHHHHHHCEEEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCEEEEEECCCC
DVSATAIRQALAKKGHCPALDDAVITHIHRHDLYNVAEHTPFNQS
CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MHNVQHAASGGRPLVLFGGTFDPVHRAHISAARAVSKVLNDAPVHLLPNAVPPHRPQPLA
CCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCC
DGEQRLRMLELACADHPQLHPDGWELAQPGPSYSLVTLQHFRKQHPDRPLVFMIGADSFA
CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHCCCCCEEEEECCCHHH
NLHQWHQWRDYTNLCHLAVVPRPNSPLADNAVLEAFPETDAHGLAQQPYGLRLMLKRPFL
HHHHHHHHHHHHCEEEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCEEEEEECCCC
DVSATAIRQALAKKGHCPALDDAVITHIHRHDLYNVAEHTPFNQS
CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA