Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

Click here to switch to the map view.

The map label for this gene is fxsA [H]

Identifier: 110834575

GI number: 110834575

Start: 1951812

End: 1952330

Strand: Direct

Name: fxsA [H]

Synonym: ABO_1714

Alternate gene names: 110834575

Gene position: 1951812-1952330 (Clockwise)

Preceding gene: 110834574

Following gene: 110834579

Centisome position: 62.56

GC content: 54.91

Gene sequence:

>519_bases
ATGGGTTTTGGTCGCGTCTTCTTCTTTATCTTCGGTTTCGCCCTACTGGAAGTCTTGGTGCTGGCACAGGTGGCCGGCAC
TATTGGCTGGCCCATTACCATCCTCGCTACGGTGATAACAGCCTTGCTGGGTAGTTATCTATTTCGTCGCCAGGGGCTGG
ATACTTGGGTGCGACTGAATCAGCGTATGCAACAGGGTGAAATGCCCGGCCAAGAAATGGTCGAAGGTATGATGCTGCTA
CTCGGCGGCGCACTGCTGATCACCCCCGGATTTATTACCGATACCGTGGGGTTTGCCCTACTGTTACCCGCCTCACGCCG
CTGGATGGCAAACAAGGTGATTCAAAAAGGATCCTTGCAAAGTTTCACCACCGTCAAAGGCGCCGGGTTTGCCTACACCC
GCACCCACTATACAAACGGGGGAAGCAATCCATTTCAGCAACGCCCAACCAGCAATGATGATCGCACCATTACCGGCGGC
GACACCATTGAGGGCGAATCCCACCGCACCGACCAATAG

Upstream 100 bases:

>100_bases
GCTCTAGCAGCGCAAAGAAAGGCTGCCGGAAGAACCCGCCCCTTGAATTCCGAGCTAAGCATAACCACATATTGATTATT
AACAGCAAACAGGACACCCC

Downstream 100 bases:

>100_bases
CAACCGGAAGCGTCCATCGTCAGCTCTTCCGTTACCCGGTAGAGCGGATGCTTCTTAATTCTAAAGAGATCAAACAGAAC
CTACAGATTAAGAATCATAT

Product: hypothetical protein

Products: NA

Alternate protein names: Suppressor of F exclusion of phage T7 [H]

Number of amino acids: Translated: 172; Mature: 171

Protein sequence:

>172_residues
MGFGRVFFFIFGFALLEVLVLAQVAGTIGWPITILATVITALLGSYLFRRQGLDTWVRLNQRMQQGEMPGQEMVEGMMLL
LGGALLITPGFITDTVGFALLLPASRRWMANKVIQKGSLQSFTTVKGAGFAYTRTHYTNGGSNPFQQRPTSNDDRTITGG
DTIEGESHRTDQ

Sequences:

>Translated_172_residues
MGFGRVFFFIFGFALLEVLVLAQVAGTIGWPITILATVITALLGSYLFRRQGLDTWVRLNQRMQQGEMPGQEMVEGMMLL
LGGALLITPGFITDTVGFALLLPASRRWMANKVIQKGSLQSFTTVKGAGFAYTRTHYTNGGSNPFQQRPTSNDDRTITGG
DTIEGESHRTDQ
>Mature_171_residues
GFGRVFFFIFGFALLEVLVLAQVAGTIGWPITILATVITALLGSYLFRRQGLDTWVRLNQRMQQGEMPGQEMVEGMMLLL
GGALLITPGFITDTVGFALLLPASRRWMANKVIQKGSLQSFTTVKGAGFAYTRTHYTNGGSNPFQQRPTSNDDRTITGGD
TIEGESHRTDQ

Specific function: Overexpression Alleviates The Exclusion Of Phage T7 In Cells Harboring The F Plasmid. [C]

COG id: COG3030

COG function: function code R; Protein affecting phage T7 exclusion by the F plasmid

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0716 (fxsA) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007313 [H]

Pfam domain/function: PF04186 FxsA [H]

EC number: NA

Molecular weight: Translated: 18895; Mature: 18764

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFGRVFFFIFGFALLEVLVLAQVAGTIGWPITILATVITALLGSYLFRRQGLDTWVRLN
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
QRMQQGEMPGQEMVEGMMLLLGGALLITPGFITDTVGFALLLPASRRWMANKVIQKGSLQ
HHHHHCCCCHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC
SFTTVKGAGFAYTRTHYTNGGSNPFQQRPTSNDDRTITGGDTIEGESHRTDQ
HHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCC
>Mature Secondary Structure 
GFGRVFFFIFGFALLEVLVLAQVAGTIGWPITILATVITALLGSYLFRRQGLDTWVRLN
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
QRMQQGEMPGQEMVEGMMLLLGGALLITPGFITDTVGFALLLPASRRWMANKVIQKGSLQ
HHHHHCCCCHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC
SFTTVKGAGFAYTRTHYTNGGSNPFQQRPTSNDDRTITGGDTIEGESHRTDQ
HHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7846149 [H]