| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110834481
Identifier: 110834481
GI number: 110834481
Start: 1853026
End: 1853400
Strand: Direct
Name: 110834481
Synonym: ABO_1620
Alternate gene names: NA
Gene position: 1853026-1853400 (Clockwise)
Preceding gene: 110834478
Following gene: 110834488
Centisome position: 59.39
GC content: 53.6
Gene sequence:
>375_bases ATGCGGGAACGGGATAACCGTCGATGTTGGGCCTCCGGGCAAAGATGGGACACAAGCGGCTATGATAAGGTAGTTTCTTC TATGACCGAACCTTTGATCACCATGAGCATGCGCCAACACAAAAACCCGGACAGCCTACGCCGGCGCCAGCAACTCGCCA TCTTCATGGCGCTATTGGTCAGTGGCATTATGTTCGCGCCCCTGACTCTCGCGCTTTATAACGATGGCAGCGTACTTTTT CTTATTCTGGGTTTGCTGCTTTGGCTAGGGGTGGGTCGATTTATCTATCACCTGCTGGCCCCCGCAACGCAACCCGGCAC TCCAAAGGCCGCCAGCACTGCAGCATTAAACAAAGACAAAGAACATCCGCAGTAA
Upstream 100 bases:
>100_bases GCCTCATCCACTATTGCCATGGCCTCTGCTCGCCGGGTTACCGGCCTCAACCAAGCGATGAAACGGCTTTTATTGATGAC GATTTCGCAATCAATCGGCG
Downstream 100 bases:
>100_bases TCAGAGGTGAGCATGCTTTGGCCGAGGCCGTAGTGGCCTGCACCTCAAACCCTATGCTGAATATCAGTCGGCGGTTTCGC AAACAAAAAAGCCCGCCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 124; Mature: 124
Protein sequence:
>124_residues MRERDNRRCWASGQRWDTSGYDKVVSSMTEPLITMSMRQHKNPDSLRRRQQLAIFMALLVSGIMFAPLTLALYNDGSVLF LILGLLLWLGVGRFIYHLLAPATQPGTPKAASTAALNKDKEHPQ
Sequences:
>Translated_124_residues MRERDNRRCWASGQRWDTSGYDKVVSSMTEPLITMSMRQHKNPDSLRRRQQLAIFMALLVSGIMFAPLTLALYNDGSVLF LILGLLLWLGVGRFIYHLLAPATQPGTPKAASTAALNKDKEHPQ >Mature_124_residues MRERDNRRCWASGQRWDTSGYDKVVSSMTEPLITMSMRQHKNPDSLRRRQQLAIFMALLVSGIMFAPLTLALYNDGSVLF LILGLLLWLGVGRFIYHLLAPATQPGTPKAASTAALNKDKEHPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13971; Mature: 13971
Theoretical pI: Translated: 10.52; Mature: 10.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRERDNRRCWASGQRWDTSGYDKVVSSMTEPLITMSMRQHKNPDSLRRRQQLAIFMALLV CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH SGIMFAPLTLALYNDGSVLFLILGLLLWLGVGRFIYHLLAPATQPGTPKAASTAALNKDK HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCC EHPQ CCCC >Mature Secondary Structure MRERDNRRCWASGQRWDTSGYDKVVSSMTEPLITMSMRQHKNPDSLRRRQQLAIFMALLV CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH SGIMFAPLTLALYNDGSVLFLILGLLLWLGVGRFIYHLLAPATQPGTPKAASTAALNKDK HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCC EHPQ CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA