Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is 110834409

Identifier: 110834409

GI number: 110834409

Start: 1769409

End: 1770392

Strand: Direct

Name: 110834409

Synonym: ABO_1548

Alternate gene names: NA

Gene position: 1769409-1770392 (Clockwise)

Preceding gene: 110834408

Following gene: 110834410

Centisome position: 56.71

GC content: 58.43

Gene sequence:

>984_bases
ATGAAACAGGCCCGCTTTGAACAACAATATCGTTCGCAATGGCAGGCACTGGAGAACCAGCTGGAGCAGCTTGAATCACT
GCACGTAAGCAAGAAGAACACGCTGCCCCTGAATACCTTCGTTACCGACTACCGCAAGCTTTGCCATCAACTGGCCCTAG
CCCGCGAAAGGGGCTACAGCGTTCAGCTGCAACAGTTCCTCAACAACCTGATGCTCCGCGCCCATCGTCAACTGTATCGC
TACAACCCCTCACTAGCGGATCGTATCGGTACCTTCATCGCCAGCGGCTTCCCCCAAGCAGTCCGCCGCCAGTGGCGCTG
GCATCTGGTCAGCGCCCTGACCTTCGTGCTGTCTATGGCGTTGGTATGGGCACTGGTGCATCAACAACCAGAAATGATCT
ATTCTGTGGTGGACGAAGCCAGCATTACCAGCCTGGAAAGCATGTACCAGCCGGATAACCAGGCGGGCATGAAGAGCGAG
CGCAGCGGCGATGACGATGTAATGATGTTCGGCCATTATATCCAGAACAATATCGGCATCGCCTTCCGTACCTTCGCCAG
CGGCTTGCTGTTAGGCGTAGGCGCGCTGGTGGTGATGCTGTTCAACGGCAGCTTCTTTGGCGCCGCCGCCGGGCACTTAA
TCAACGTGGGTGCCCAAGAACCCTTCTTCACCTTTGTGATTGCCCACGGCGCCCCAGAGCTTACCGCCATTGTGCTAGCC
GGTGGCGCGGGACTACGGCTTGGCTGGGCCATTATTGCTCCCGGCCCCTGGTCGCGGTTGGACGCCCTGCGCCTGGCGGC
CCGGGATGCGCTGCCCACCATGTACGGAGTGTTTGCTCTGTTACTGCTGGCGGCCTTTATTGAAGCGTTCTGGTCACCAC
GGGACCTGGCGGCGGCTATCAAATACAGCGTGGGCGCAGCCTGCTGGGTCCTTTTGTATCTGTATCTTTTCTTCGGGGGG
CGGGATGGAACTCGAGAAGGCTAG

Upstream 100 bases:

>100_bases
GCCAGCAAGAGCTGGCATTGCTGGTTTACCCTGAATTGACACCGGCCCAAGCATTACAACGCCTAAAGGCCGTCAGCCGC
TATCTGGTGGAGGGCCCAGC

Downstream 100 bases:

>100_bases
CGCTCGTCTAGCGCCGCGCACCCCCTGGCAGGCAACAGATCTGGGCACGCAGTTCTACCGCCATTGGGCCGGGCCCATTA
CCGCTGTGTGGCTGCTATTT

Product: hypothetical protein

Products: NA

Alternate protein names: Transmembrane Protein

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MKQARFEQQYRSQWQALENQLEQLESLHVSKKNTLPLNTFVTDYRKLCHQLALARERGYSVQLQQFLNNLMLRAHRQLYR
YNPSLADRIGTFIASGFPQAVRRQWRWHLVSALTFVLSMALVWALVHQQPEMIYSVVDEASITSLESMYQPDNQAGMKSE
RSGDDDVMMFGHYIQNNIGIAFRTFASGLLLGVGALVVMLFNGSFFGAAAGHLINVGAQEPFFTFVIAHGAPELTAIVLA
GGAGLRLGWAIIAPGPWSRLDALRLAARDALPTMYGVFALLLLAAFIEAFWSPRDLAAAIKYSVGAACWVLLYLYLFFGG
RDGTREG

Sequences:

>Translated_327_residues
MKQARFEQQYRSQWQALENQLEQLESLHVSKKNTLPLNTFVTDYRKLCHQLALARERGYSVQLQQFLNNLMLRAHRQLYR
YNPSLADRIGTFIASGFPQAVRRQWRWHLVSALTFVLSMALVWALVHQQPEMIYSVVDEASITSLESMYQPDNQAGMKSE
RSGDDDVMMFGHYIQNNIGIAFRTFASGLLLGVGALVVMLFNGSFFGAAAGHLINVGAQEPFFTFVIAHGAPELTAIVLA
GGAGLRLGWAIIAPGPWSRLDALRLAARDALPTMYGVFALLLLAAFIEAFWSPRDLAAAIKYSVGAACWVLLYLYLFFGG
RDGTREG
>Mature_327_residues
MKQARFEQQYRSQWQALENQLEQLESLHVSKKNTLPLNTFVTDYRKLCHQLALARERGYSVQLQQFLNNLMLRAHRQLYR
YNPSLADRIGTFIASGFPQAVRRQWRWHLVSALTFVLSMALVWALVHQQPEMIYSVVDEASITSLESMYQPDNQAGMKSE
RSGDDDVMMFGHYIQNNIGIAFRTFASGLLLGVGALVVMLFNGSFFGAAAGHLINVGAQEPFFTFVIAHGAPELTAIVLA
GGAGLRLGWAIIAPGPWSRLDALRLAARDALPTMYGVFALLLLAAFIEAFWSPRDLAAAIKYSVGAACWVLLYLYLFFGG
RDGTREG

Specific function: Unknown

COG id: COG1300

COG function: function code S; Uncharacterized membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36544; Mature: 36544

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQARFEQQYRSQWQALENQLEQLESLHVSKKNTLPLNTFVTDYRKLCHQLALARERGYS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
VQLQQFLNNLMLRAHRQLYRYNPSLADRIGTFIASGFPQAVRRQWRWHLVSALTFVLSMA
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
LVWALVHQQPEMIYSVVDEASITSLESMYQPDNQAGMKSERSGDDDVMMFGHYIQNNIGI
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCH
AFRTFASGLLLGVGALVVMLFNGSFFGAAAGHLINVGAQEPFFTFVIAHGAPELTAIVLA
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEECCCCCCCEEEEEECCCCCCEEEEEE
GGAGLRLGWAIIAPGPWSRLDALRLAARDALPTMYGVFALLLLAAFIEAFWSPRDLAAAI
CCCCCEECEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
KYSVGAACWVLLYLYLFFGGRDGTREG
HHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKQARFEQQYRSQWQALENQLEQLESLHVSKKNTLPLNTFVTDYRKLCHQLALARERGYS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
VQLQQFLNNLMLRAHRQLYRYNPSLADRIGTFIASGFPQAVRRQWRWHLVSALTFVLSMA
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
LVWALVHQQPEMIYSVVDEASITSLESMYQPDNQAGMKSERSGDDDVMMFGHYIQNNIGI
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCH
AFRTFASGLLLGVGALVVMLFNGSFFGAAAGHLINVGAQEPFFTFVIAHGAPELTAIVLA
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEECCCCCCCEEEEEECCCCCCEEEEEE
GGAGLRLGWAIIAPGPWSRLDALRLAARDALPTMYGVFALLLLAAFIEAFWSPRDLAAAI
CCCCCEECEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
KYSVGAACWVLLYLYLFFGGRDGTREG
HHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA