Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is 110834410

Identifier: 110834410

GI number: 110834410

Start: 1770373

End: 1771884

Strand: Direct

Name: 110834410

Synonym: ABO_1549

Alternate gene names: NA

Gene position: 1770373-1771884 (Clockwise)

Preceding gene: 110834409

Following gene: 110834411

Centisome position: 56.74

GC content: 59.13

Gene sequence:

>1512_bases
ATGGAACTCGAGAAGGCTAGCGCTCGTCTAGCGCCGCGCACCCCCTGGCAGGCAACAGATCTGGGCACGCAGTTCTACCG
CCATTGGGCCGGGCCCATTACCGCTGTGTGGCTGCTATTTACCGCGGTGCCGTATGCCCTACTGCTAACACTGGCCGCGG
TGGGCAACAGCCTCTGGCCGCTCTTCGTATTCTGGTGGCTCAAGCCCCTGTGGGAGCGGCCTCTGTTGGCCTTTTACAGC
CATGCCCTGTTTGGCGAAACCCTCACCCTGAAAGCCTTGCTTAAACGCTGGCCCAGTTACGCCCTGCCCGGACTGGCCGG
CCAGCTCACTTGGCGACGCCTGAGCCCCCTGCGCAGTTTCAATGCCTGCGTGTGGCAACTTGAACAAGTGAAAGGAGACA
CCGCCAGCCAGCGACTCAAAGTACTCAACAGCTACCCGTCCAATCGGGGCGGCATGCTGACCCTGCTGATACTGCACCTG
GAACAGTTCATGACCTTCGGGCTAATGGCGTTGCTGTACATGCTGGTGCCCTGGCAATTCAACCTGGAGTTTAGTGATTG
GTTCTATGAACAAAGCGCATTACAACTGGCTATCTCCGGGCTGTGTTTCTATCTGGTGCTGTGTGTCACCGAGCCCCTCT
ATGTAGCCTGTGGCTTTGCCCTCTACTTGAACAAGCGCACCTGGCTGGAGGGCTGGGACCTGCAACTCGGACTCTCCCGG
CTGGGAGAACGCCGCCGCGCGGCCAAAAATATCATCGCCACCCTGCTGGTATTGATGTTGGCGGCACCGTTTATGGAACC
CGCTCAGGCGCAAACAGCCGCCTCAAGCACCACAACCAGCGAACAACAACAAGTGATCGAACTGCTGGCCAGTCCAGACT
TCATGCCCCTGGAAGAGCACACCGAACGGCAGTGGATAAACCGGGATAACAGTGACTCCGAAAGCTGGATGGAAAAACTC
TGGGAGTTTCTGTTCGATATCCTGGACGGTGATAAAGTCGATACGTCCAGCGCCCCCGTGAATATTCCTGATGCCCTGTT
ATGGGCGATTTTCTGGACACTGTTTGTGGCACTGGCGCTGTGGTTGATCGTCAAGGTTGCCAACCAGTTCGGCCTGCGCA
AGCATCACTCAGACAAACGCCCGGTCATTCCCACCCACGTGGCCGGGCTGGATATTCGTAACCGCAGCCTGCCTAAAAAC
CTGAACCGGGCCGTAGAAGAGGCACTCAAGGCTGGAGATACCCGCGCCGCTCTCGCCGTACTGATGCGTGCCACCCTGGC
CGGTGTTCTGGCACGCTACCCGGTGCCACTGGCAGCAGGCAGCACCGAGCAGCAATGCCTGCGCACCCTGCAACAGCAGC
ACGGCAACCCACTACCCATTGACTACCTGCAACGCCTTACCCAGGCTTGGATCAGCACCGCCTGGGCCCACCGTCCGGTC
AGTGACGAACAGGTCCGCACGCTGGCACAGCACTGGCAGCAAATGGATCCGCTGGAGGCAGACCATGGGTAA

Upstream 100 bases:

>100_bases
GCGTTCTGGTCACCACGGGACCTGGCGGCGGCTATCAAATACAGCGTGGGCGCAGCCTGCTGGGTCCTTTTGTATCTGTA
TCTTTTCTTCGGGGGGCGGG

Downstream 100 bases:

>100_bases
AACCGCCCGGCTGCGCCGCGCCTTTCCCTGGCTACTGGCTGCCCTGTTGCTTGCCATGGTCTCTGGCTACTACGCCCTCA
CTGAGCCAGTCACCTACATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 503; Mature: 503

Protein sequence:

>503_residues
MELEKASARLAPRTPWQATDLGTQFYRHWAGPITAVWLLFTAVPYALLLTLAAVGNSLWPLFVFWWLKPLWERPLLAFYS
HALFGETLTLKALLKRWPSYALPGLAGQLTWRRLSPLRSFNACVWQLEQVKGDTASQRLKVLNSYPSNRGGMLTLLILHL
EQFMTFGLMALLYMLVPWQFNLEFSDWFYEQSALQLAISGLCFYLVLCVTEPLYVACGFALYLNKRTWLEGWDLQLGLSR
LGERRRAAKNIIATLLVLMLAAPFMEPAQAQTAASSTTTSEQQQVIELLASPDFMPLEEHTERQWINRDNSDSESWMEKL
WEFLFDILDGDKVDTSSAPVNIPDALLWAIFWTLFVALALWLIVKVANQFGLRKHHSDKRPVIPTHVAGLDIRNRSLPKN
LNRAVEEALKAGDTRAALAVLMRATLAGVLARYPVPLAAGSTEQQCLRTLQQQHGNPLPIDYLQRLTQAWISTAWAHRPV
SDEQVRTLAQHWQQMDPLEADHG

Sequences:

>Translated_503_residues
MELEKASARLAPRTPWQATDLGTQFYRHWAGPITAVWLLFTAVPYALLLTLAAVGNSLWPLFVFWWLKPLWERPLLAFYS
HALFGETLTLKALLKRWPSYALPGLAGQLTWRRLSPLRSFNACVWQLEQVKGDTASQRLKVLNSYPSNRGGMLTLLILHL
EQFMTFGLMALLYMLVPWQFNLEFSDWFYEQSALQLAISGLCFYLVLCVTEPLYVACGFALYLNKRTWLEGWDLQLGLSR
LGERRRAAKNIIATLLVLMLAAPFMEPAQAQTAASSTTTSEQQQVIELLASPDFMPLEEHTERQWINRDNSDSESWMEKL
WEFLFDILDGDKVDTSSAPVNIPDALLWAIFWTLFVALALWLIVKVANQFGLRKHHSDKRPVIPTHVAGLDIRNRSLPKN
LNRAVEEALKAGDTRAALAVLMRATLAGVLARYPVPLAAGSTEQQCLRTLQQQHGNPLPIDYLQRLTQAWISTAWAHRPV
SDEQVRTLAQHWQQMDPLEADHG
>Mature_503_residues
MELEKASARLAPRTPWQATDLGTQFYRHWAGPITAVWLLFTAVPYALLLTLAAVGNSLWPLFVFWWLKPLWERPLLAFYS
HALFGETLTLKALLKRWPSYALPGLAGQLTWRRLSPLRSFNACVWQLEQVKGDTASQRLKVLNSYPSNRGGMLTLLILHL
EQFMTFGLMALLYMLVPWQFNLEFSDWFYEQSALQLAISGLCFYLVLCVTEPLYVACGFALYLNKRTWLEGWDLQLGLSR
LGERRRAAKNIIATLLVLMLAAPFMEPAQAQTAASSTTTSEQQQVIELLASPDFMPLEEHTERQWINRDNSDSESWMEKL
WEFLFDILDGDKVDTSSAPVNIPDALLWAIFWTLFVALALWLIVKVANQFGLRKHHSDKRPVIPTHVAGLDIRNRSLPKN
LNRAVEEALKAGDTRAALAVLMRATLAGVLARYPVPLAAGSTEQQCLRTLQQQHGNPLPIDYLQRLTQAWISTAWAHRPV
SDEQVRTLAQHWQQMDPLEADHG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57217; Mature: 57217

Theoretical pI: Translated: 7.64; Mature: 7.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELEKASARLAPRTPWQATDLGTQFYRHWAGPITAVWLLFTAVPYALLLTLAAVGNSLWP
CCCCHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
LFVFWWLKPLWERPLLAFYSHALFGETLTLKALLKRWPSYALPGLAGQLTWRRLSPLRSF
HHHHHHHHHHHHCHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
NACVWQLEQVKGDTASQRLKVLNSYPSNRGGMLTLLILHLEQFMTFGLMALLYMLVPWQF
HHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
NLEFSDWFYEQSALQLAISGLCFYLVLCVTEPLYVACGFALYLNKRTWLEGWDLQLGLSR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHCCCCCHHHHHHH
LGERRRAAKNIIATLLVLMLAAPFMEPAQAQTAASSTTTSEQQQVIELLASPDFMPLEEH
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHH
TERQWINRDNSDSESWMEKLWEFLFDILDGDKVDTSSAPVNIPDALLWAIFWTLFVALAL
HHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
WLIVKVANQFGLRKHHSDKRPVIPTHVAGLDIRNRSLPKNLNRAVEEALKAGDTRAALAV
HHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHH
LMRATLAGVLARYPVPLAAGSTEQQCLRTLQQQHGNPLPIDYLQRLTQAWISTAWAHRPV
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCC
SDEQVRTLAQHWQQMDPLEADHG
CHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MELEKASARLAPRTPWQATDLGTQFYRHWAGPITAVWLLFTAVPYALLLTLAAVGNSLWP
CCCCHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
LFVFWWLKPLWERPLLAFYSHALFGETLTLKALLKRWPSYALPGLAGQLTWRRLSPLRSF
HHHHHHHHHHHHCHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
NACVWQLEQVKGDTASQRLKVLNSYPSNRGGMLTLLILHLEQFMTFGLMALLYMLVPWQF
HHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
NLEFSDWFYEQSALQLAISGLCFYLVLCVTEPLYVACGFALYLNKRTWLEGWDLQLGLSR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHCCCCCHHHHHHH
LGERRRAAKNIIATLLVLMLAAPFMEPAQAQTAASSTTTSEQQQVIELLASPDFMPLEEH
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHH
TERQWINRDNSDSESWMEKLWEFLFDILDGDKVDTSSAPVNIPDALLWAIFWTLFVALAL
HHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
WLIVKVANQFGLRKHHSDKRPVIPTHVAGLDIRNRSLPKNLNRAVEEALKAGDTRAALAV
HHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHH
LMRATLAGVLARYPVPLAAGSTEQQCLRTLQQQHGNPLPIDYLQRLTQAWISTAWAHRPV
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCC
SDEQVRTLAQHWQQMDPLEADHG
CHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA