Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is 110834363

Identifier: 110834363

GI number: 110834363

Start: 1714931

End: 1716112

Strand: Direct

Name: 110834363

Synonym: ABO_1502

Alternate gene names: NA

Gene position: 1714931-1716112 (Clockwise)

Preceding gene: 110834362

Following gene: 110834364

Centisome position: 54.96

GC content: 56.43

Gene sequence:

>1182_bases
GTGGCCGCGCCGTGCATGCAAGCATCAGGGCCTCGCTCGCTAACCAATGCAGACCTAATAATGAAAAAAATCATCGCCCT
TGCCGTTATTGTTACCCTGGCCGCCTACCTTTTATTCTGGCCCGTCAGCATAGAGCCTGTTGCTTGGCAGGCGCCGAAAG
CCCCAGCTCTGGATGGTCCCTTCGCCACTAACACCGCCCTTCGCAACAGCAAAATCATCGGCGAAGATCAGGGCACTGGT
CCGGAGGACGTGGCTATCAATGATGATGGTTACCTATACGTGGGGTATGACGATGGCCGCATCGTTCGTTTCGACCCAAA
CGGCCAAAACCCTGACTTGATTGCCAATACTGAAGGGCGCCCTCTTGGATTGGATTTTTCCCCCTCCGGAGACCTAATCG
TTGCCGATGGTTACAAAGGGCTCTTGAGTGTCAGTGCTAGTGGCGCCATCACCATATTGAGTACCAGCGCCAATGGTCTG
GACTACCGCTTCACCGATGATGTGGACGTGGATAGCAACGGTATCGCCTATTTCTCCGATGCCTCCAGCAAATTTGGCCC
CGCCATGCACGCCCGCGACGACATCATGGAGCACGGCGGCCACGGGCGGCTGTTGCGTTATGACCCGAATACAGAACAGG
CCGAAGTGTTACTTGACGGCCTGCAGTTCGCCAACGGCATCGCCCTTTCCCAGAATGAAGACTTCGTACTGGTTACCGAA
ACAGGCAACTACCGCATCGTTCGCTACTGGCTCAAAGGGGAGAAAGCCGGCAGCCACGATATCTTTATGGACAACCTGCC
CGGCATCCCTGATGGCATTTCGGCGAACGGCGAAGGCACTTTCTGGCTTGCCCTATTCAGCCCCCGCAATGCCATTCTCG
ACAGCCTCTCCGACAAGCCTCTGCTTCGCAAAGTCGCCTTGCGCATGCCCAGCTTTCTGCAACCCCAAACAGTAGCCCAC
GGCTTTGTACTCGGCCTTGATGAGCAAGGGCAAGTCACTCACAACCTGCAAGATAACAGCGACGGCGCTTTCGCTCCCAT
CACCAGCGCGGAGCAACACGGTAACACCCTGTACCTGGGCAGCCTCACCGAACCTCGCTTCGCCGCTTTCACCCTGCCCG
GCACAGCAACAGCAACAGCAACAGCAACAGCAACAGTCCACGATGGAGCCAACAAACAATGA

Upstream 100 bases:

>100_bases
AAACCCAATACTCACGGTGCATGAAGCGTCCTTTAGCGAAACAGATTTTTCCCACTATCCTAGCCACGTTTATTGCCAAT
GATTAACATCTTGCATTTGC

Downstream 100 bases:

>100_bases
GCACACTAAACGCGGCTTTTATCGGCCTTGGCACCATGGGCTACCCCATGGCTGGCCACCTGGCCGAAGCAGGCATTGCC
ATGACCGTTTACAACCGCAC

Product: hypothetical protein

Products: NA

Alternate protein names: Strictosidine Synthase Family Protein; Gluconolactonase; Inner-Membrane Translocator; ABC Transporter Permease Protein; Strictosidine Synthase Conserved Region; Permease Protein Of Sugar ABC Transporter; ABC Transporter; SMP-30/Gluconolaconase/LRE Domain Protein; Strictosidine Synthase Subfamily

Number of amino acids: Translated: 393; Mature: 392

Protein sequence:

>393_residues
MAAPCMQASGPRSLTNADLIMKKIIALAVIVTLAAYLLFWPVSIEPVAWQAPKAPALDGPFATNTALRNSKIIGEDQGTG
PEDVAINDDGYLYVGYDDGRIVRFDPNGQNPDLIANTEGRPLGLDFSPSGDLIVADGYKGLLSVSASGAITILSTSANGL
DYRFTDDVDVDSNGIAYFSDASSKFGPAMHARDDIMEHGGHGRLLRYDPNTEQAEVLLDGLQFANGIALSQNEDFVLVTE
TGNYRIVRYWLKGEKAGSHDIFMDNLPGIPDGISANGEGTFWLALFSPRNAILDSLSDKPLLRKVALRMPSFLQPQTVAH
GFVLGLDEQGQVTHNLQDNSDGAFAPITSAEQHGNTLYLGSLTEPRFAAFTLPGTATATATATATVHDGANKQ

Sequences:

>Translated_393_residues
MAAPCMQASGPRSLTNADLIMKKIIALAVIVTLAAYLLFWPVSIEPVAWQAPKAPALDGPFATNTALRNSKIIGEDQGTG
PEDVAINDDGYLYVGYDDGRIVRFDPNGQNPDLIANTEGRPLGLDFSPSGDLIVADGYKGLLSVSASGAITILSTSANGL
DYRFTDDVDVDSNGIAYFSDASSKFGPAMHARDDIMEHGGHGRLLRYDPNTEQAEVLLDGLQFANGIALSQNEDFVLVTE
TGNYRIVRYWLKGEKAGSHDIFMDNLPGIPDGISANGEGTFWLALFSPRNAILDSLSDKPLLRKVALRMPSFLQPQTVAH
GFVLGLDEQGQVTHNLQDNSDGAFAPITSAEQHGNTLYLGSLTEPRFAAFTLPGTATATATATATVHDGANKQ
>Mature_392_residues
AAPCMQASGPRSLTNADLIMKKIIALAVIVTLAAYLLFWPVSIEPVAWQAPKAPALDGPFATNTALRNSKIIGEDQGTGP
EDVAINDDGYLYVGYDDGRIVRFDPNGQNPDLIANTEGRPLGLDFSPSGDLIVADGYKGLLSVSASGAITILSTSANGLD
YRFTDDVDVDSNGIAYFSDASSKFGPAMHARDDIMEHGGHGRLLRYDPNTEQAEVLLDGLQFANGIALSQNEDFVLVTET
GNYRIVRYWLKGEKAGSHDIFMDNLPGIPDGISANGEGTFWLALFSPRNAILDSLSDKPLLRKVALRMPSFLQPQTVAHG
FVLGLDEQGQVTHNLQDNSDGAFAPITSAEQHGNTLYLGSLTEPRFAAFTLPGTATATATATATVHDGANKQ

Specific function: Unknown

COG id: COG3386

COG function: function code G; Gluconolactonase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI24308201, Length=376, Percent_Identity=34.3085106382979, Blast_Score=179, Evalue=4e-45,
Organism=Caenorhabditis elegans, GI17534469, Length=354, Percent_Identity=27.9661016949153, Blast_Score=123, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI17542364, Length=356, Percent_Identity=26.9662921348315, Blast_Score=116, Evalue=3e-26,
Organism=Caenorhabditis elegans, GI193207213, Length=336, Percent_Identity=27.0833333333333, Blast_Score=110, Evalue=1e-24,
Organism=Drosophila melanogaster, GI17137194, Length=250, Percent_Identity=35.6, Blast_Score=126, Evalue=3e-29,
Organism=Drosophila melanogaster, GI24650914, Length=369, Percent_Identity=27.3712737127371, Blast_Score=113, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41958; Mature: 41827

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAPCMQASGPRSLTNADLIMKKIIALAVIVTLAAYLLFWPVSIEPVAWQAPKAPALDGP
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEECCCCCCCCCCC
FATNTALRNSKIIGEDQGTGPEDVAINDDGYLYVGYDDGRIVRFDPNGQNPDLIANTEGR
CCCCCHHCCCEEECCCCCCCCCCEEECCCCEEEEEECCCEEEEECCCCCCCCEEECCCCC
PLGLDFSPSGDLIVADGYKGLLSVSASGAITILSTSANGLDYRFTDDVDVDSNGIAYFSD
EEEEEECCCCCEEEECCCCEEEEECCCCEEEEEEECCCCCEEEECCCCCCCCCCEEEEEC
ASSKFGPAMHARDDIMEHGGHGRLLRYDPNTEQAEVLLDGLQFANGIALSQNEDFVLVTE
CCCCCCCCHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHCCEEEECCCCEEEEEE
TGNYRIVRYWLKGEKAGSHDIFMDNLPGIPDGISANGEGTFWLALFSPRNAILDSLSDKP
CCCEEEEEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEEEECCCHHHHHCCCCCH
LLRKVALRMPSFLQPQTVAHGFVLGLDEQGQVTHNLQDNSDGAFAPITSAEQHGNTLYLG
HHHHHHHHCCCCCCCHHHCCEEEEEECCCCCEEECCCCCCCCCEEECCCHHHCCCEEEEE
SLTEPRFAAFTLPGTATATATATATVHDGANKQ
CCCCCCEEEEECCCCCCEEEEEEEEECCCCCCC
>Mature Secondary Structure 
AAPCMQASGPRSLTNADLIMKKIIALAVIVTLAAYLLFWPVSIEPVAWQAPKAPALDGP
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEECCCCCCCCCCC
FATNTALRNSKIIGEDQGTGPEDVAINDDGYLYVGYDDGRIVRFDPNGQNPDLIANTEGR
CCCCCHHCCCEEECCCCCCCCCCEEECCCCEEEEEECCCEEEEECCCCCCCCEEECCCCC
PLGLDFSPSGDLIVADGYKGLLSVSASGAITILSTSANGLDYRFTDDVDVDSNGIAYFSD
EEEEEECCCCCEEEECCCCEEEEECCCCEEEEEEECCCCCEEEECCCCCCCCCCEEEEEC
ASSKFGPAMHARDDIMEHGGHGRLLRYDPNTEQAEVLLDGLQFANGIALSQNEDFVLVTE
CCCCCCCCHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHCCEEEECCCCEEEEEE
TGNYRIVRYWLKGEKAGSHDIFMDNLPGIPDGISANGEGTFWLALFSPRNAILDSLSDKP
CCCEEEEEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEEEECCCHHHHHCCCCCH
LLRKVALRMPSFLQPQTVAHGFVLGLDEQGQVTHNLQDNSDGAFAPITSAEQHGNTLYLG
HHHHHHHHCCCCCCCHHHCCEEEEEECCCCCEEECCCCCCCCCEEECCCHHHCCCEEEEE
SLTEPRFAAFTLPGTATATATATATVHDGANKQ
CCCCCCEEEEECCCCCCEEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA