Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is 110834338

Identifier: 110834338

GI number: 110834338

Start: 1685272

End: 1685904

Strand: Direct

Name: 110834338

Synonym: ABO_1477

Alternate gene names: NA

Gene position: 1685272-1685904 (Clockwise)

Preceding gene: 110834337

Following gene: 110834339

Centisome position: 54.01

GC content: 53.24

Gene sequence:

>633_bases
ATGAACTTCGTGCCCATAGAGCAAAGTGTTCAGCGTCGACGGCGAGCCGTCATTACTGGCCTAACACCATATATGAATGA
ACCCGTGTTACGGGAAGCGATTAGCCACTGGCAACAGCATTATTCGCAGCGCCCAAGTTTTTCACTGCAAGGGTTTGTGA
GTGATCTATGCCGCCTGTTCGATCTCAATGAGCGTAGGCATCACATTCATATGAGTTTGGTACAAGCCATGACGCTTTCC
GACAGTGAACTGGCCGCTGACCCTCTGGCCATTAGTGACAAGAATCTCACCGACACTCATCCTTATACTTATGCCTTCCA
GCTTCTGCTTCAAGCGCTTTGGCTGAGACTTGGCAAACCGACAGCCCGCCAATTGAAGGTGGATCAAGGGACGCAATTGC
GACAGGCCAGTGTTAGCACAGAAACTCGGCTCACTATGGAATACTGGCTACAAGCACCGGACAAACCGCTAAGCCCCCTG
CCACTGCCCAGCCTGCGCGATCAATTGAATCGTACCTACGTACTGCTATGCCAGCGGCTGGGGCCAGTGGAGGCTGACCG
TCAGCTCAAGGGCGCCTACCAGACAACCTTACTCCAGCTTGATAACCCCGAAGGGCTGCAGGCACTGATGTAG

Upstream 100 bases:

>100_bases
GCGAACATGCTGAAATCGGCTATCCTGAATTCCCCCAAAACACCCTATACAGCAGCGAAAATTATAGCGCAGAGAAGGCA
AGCCGTCAGGAGCCGCGGCC

Downstream 100 bases:

>100_bases
ACTTACTCTCTGTTACACAGCACAGGATCAGGTACTCTCAGAAGTTGAAGAGACCGAGGTTCGCACCACAGGGGAAATGA
TGAAATTACATCACCAGATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MNFVPIEQSVQRRRRAVITGLTPYMNEPVLREAISHWQQHYSQRPSFSLQGFVSDLCRLFDLNERRHHIHMSLVQAMTLS
DSELAADPLAISDKNLTDTHPYTYAFQLLLQALWLRLGKPTARQLKVDQGTQLRQASVSTETRLTMEYWLQAPDKPLSPL
PLPSLRDQLNRTYVLLCQRLGPVEADRQLKGAYQTTLLQLDNPEGLQALM

Sequences:

>Translated_210_residues
MNFVPIEQSVQRRRRAVITGLTPYMNEPVLREAISHWQQHYSQRPSFSLQGFVSDLCRLFDLNERRHHIHMSLVQAMTLS
DSELAADPLAISDKNLTDTHPYTYAFQLLLQALWLRLGKPTARQLKVDQGTQLRQASVSTETRLTMEYWLQAPDKPLSPL
PLPSLRDQLNRTYVLLCQRLGPVEADRQLKGAYQTTLLQLDNPEGLQALM
>Mature_210_residues
MNFVPIEQSVQRRRRAVITGLTPYMNEPVLREAISHWQQHYSQRPSFSLQGFVSDLCRLFDLNERRHHIHMSLVQAMTLS
DSELAADPLAISDKNLTDTHPYTYAFQLLLQALWLRLGKPTARQLKVDQGTQLRQASVSTETRLTMEYWLQAPDKPLSPL
PLPSLRDQLNRTYVLLCQRLGPVEADRQLKGAYQTTLLQLDNPEGLQALM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24149; Mature: 24149

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFVPIEQSVQRRRRAVITGLTPYMNEPVLREAISHWQQHYSQRPSFSLQGFVSDLCRLF
CCCCCCHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
DLNERRHHIHMSLVQAMTLSDSELAADPLAISDKNLTDTHPYTYAFQLLLQALWLRLGKP
CCCCHHHHHHHHHHHHHHCCCCHHCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHCCC
TARQLKVDQGTQLRQASVSTETRLTMEYWLQAPDKPLSPLPLPSLRDQLNRTYVLLCQRL
HHHHEECCCCCHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC
GPVEADRQLKGAYQTTLLQLDNPEGLQALM
CCCCHHHHHHHHHHHHHEECCCCCHHHHCC
>Mature Secondary Structure
MNFVPIEQSVQRRRRAVITGLTPYMNEPVLREAISHWQQHYSQRPSFSLQGFVSDLCRLF
CCCCCCHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
DLNERRHHIHMSLVQAMTLSDSELAADPLAISDKNLTDTHPYTYAFQLLLQALWLRLGKP
CCCCHHHHHHHHHHHHHHCCCCHHCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHCCC
TARQLKVDQGTQLRQASVSTETRLTMEYWLQAPDKPLSPLPLPSLRDQLNRTYVLLCQRL
HHHHEECCCCCHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC
GPVEADRQLKGAYQTTLLQLDNPEGLQALM
CCCCHHHHHHHHHHHHHEECCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA