| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is gltP [H]
Identifier: 110834339
GI number: 110834339
Start: 1685981
End: 1687285
Strand: Direct
Name: gltP [H]
Synonym: ABO_1478
Alternate gene names: 110834339
Gene position: 1685981-1687285 (Clockwise)
Preceding gene: 110834338
Following gene: 110834340
Centisome position: 54.04
GC content: 55.33
Gene sequence:
>1305_bases ATGATGAAATTACATCACCAGATATTTTTTGCCATGCTGGCCGGCACTCTGGCCGGCAGTTTTACTGCGGAATCCAGCAC CCTCTTGGGAATGCCGATTATCAGCGGTTACGATCTGGTGGGCAGCCTGTTCATCAATGCACTGAAGATGGTGGTCATTC CGTTAATCGTTACCGCCATTATCAACGGCATGGTGGGCGTTGGCGATGACGAAAACCTGGGACGAATGGGTTTGAAAACC GTCGTCCTATACATGAGCACAACCCTGGTGGCGGTGCTAATCGGGCTGGTCGCAGTGAATCTATTCACTCCCGGAATCAT CAATGGTCAGCCCGCCCGAGATCTACTGGGCTTGGCCACAGAAACCCAGGACGCCCTAGCTAAAATCGACGGCCGAGGCG TCGGTGATTTCACCGAGATCCTACTCCAGATGCTTCCCCCCAATCTGATCGCCGCTGCCGCCAACGGGCAAATGCTCGGG CTGATCGTCTTTTCGCTGCTGTTTGGGTTTTTTCTGCGCACCGAGCGCTCATCGTCTGGCCAGAGTCTGCGCAATATCAT CGACGGGATCTACCAGGTGGTCATGAAAATCACCATGCTGGTGATCCGTTTTACCCCGCTAGGAATATTCGCTCTTATTG CCGCCACCGTGACTCGCACTGGCATGGATGCCATCGAACCGCTTGCCTGGTTCTTTCTTACGGTACTGGTAGCCCTGGCT CTGCATGCTTTCGTGTTCATGCCGCTGCTGATCGTGCTAGCCGCGAAACGCTCCCCTCTTCGCCATATTCAAGCCATGAC GCCAGCGCTGCTCACGGCATTCTCCTCGGCCAGTTCAGCAGCAACGTTGCCGCTGTCTATGGAATGTGTACAGAAACGCT CCGGCGTATCAACCCGCACCAGCAGCTTCGTGCTGCCTCTGGGGGCCACCGTCAATATGGATGGCACCGCCCTATATGAA TGTGTAGCAGCCATGTTTATTGCCCAGGCTTACGGTATGGATCTGTCTCTGGCCACCCAGTTCATGATCGTGATTACCGC CCTGCTTACATCAATCGGCGTAGCCAGTATTCCAGCTGCCTCCTTAGTGGCCATCACCGTGATCCTTGGCGCTATCGGCC TGCCAGCCGAAGCCATCGGACTGATTCTGGTAACGGATCGTGTGCTGGATATGTGCCGCACCGCCGTCAACGTCTGGGGA GATAGTGTGGTAACCGTGGTGCTCGCCCGTAGCGAGGGGGAAGAAACGGTGTTGTCGCTACCGGTTTCCAAGATGGAGAA GGTAACGACAACAGACGTACATTGA
Upstream 100 bases:
>100_bases GAAGGGCTGCAGGCACTGATGTAGACTTACTCTCTGTTACACAGCACAGGATCAGGTACTCTCAGAAGTTGAAGAGACCG AGGTTCGCACCACAGGGGAA
Downstream 100 bases:
>100_bases ACTGGTGATGCAACTGTTAACGAACACTCTTAGAATGCGTCGGGAGCGCCGCTACTCTCCCAATCGCGCTTAATGGTAAC GGCTGCGCTGGCGATAACAG
Product: sodium:dicarboxylate symporter family protein
Products: L-aspartate [Cytoplasm]; Proton [Cytoplasm]; L-glutamate [Cytoplasm] [C]
Alternate protein names: Glutamate-aspartate carrier protein [H]
Number of amino acids: Translated: 434; Mature: 434
Protein sequence:
>434_residues MMKLHHQIFFAMLAGTLAGSFTAESSTLLGMPIISGYDLVGSLFINALKMVVIPLIVTAIINGMVGVGDDENLGRMGLKT VVLYMSTTLVAVLIGLVAVNLFTPGIINGQPARDLLGLATETQDALAKIDGRGVGDFTEILLQMLPPNLIAAAANGQMLG LIVFSLLFGFFLRTERSSSGQSLRNIIDGIYQVVMKITMLVIRFTPLGIFALIAATVTRTGMDAIEPLAWFFLTVLVALA LHAFVFMPLLIVLAAKRSPLRHIQAMTPALLTAFSSASSAATLPLSMECVQKRSGVSTRTSSFVLPLGATVNMDGTALYE CVAAMFIAQAYGMDLSLATQFMIVITALLTSIGVASIPAASLVAITVILGAIGLPAEAIGLILVTDRVLDMCRTAVNVWG DSVVTVVLARSEGEETVLSLPVSKMEKVTTTDVH
Sequences:
>Translated_434_residues MMKLHHQIFFAMLAGTLAGSFTAESSTLLGMPIISGYDLVGSLFINALKMVVIPLIVTAIINGMVGVGDDENLGRMGLKT VVLYMSTTLVAVLIGLVAVNLFTPGIINGQPARDLLGLATETQDALAKIDGRGVGDFTEILLQMLPPNLIAAAANGQMLG LIVFSLLFGFFLRTERSSSGQSLRNIIDGIYQVVMKITMLVIRFTPLGIFALIAATVTRTGMDAIEPLAWFFLTVLVALA LHAFVFMPLLIVLAAKRSPLRHIQAMTPALLTAFSSASSAATLPLSMECVQKRSGVSTRTSSFVLPLGATVNMDGTALYE CVAAMFIAQAYGMDLSLATQFMIVITALLTSIGVASIPAASLVAITVILGAIGLPAEAIGLILVTDRVLDMCRTAVNVWG DSVVTVVLARSEGEETVLSLPVSKMEKVTTTDVH >Mature_434_residues MMKLHHQIFFAMLAGTLAGSFTAESSTLLGMPIISGYDLVGSLFINALKMVVIPLIVTAIINGMVGVGDDENLGRMGLKT VVLYMSTTLVAVLIGLVAVNLFTPGIINGQPARDLLGLATETQDALAKIDGRGVGDFTEILLQMLPPNLIAAAANGQMLG LIVFSLLFGFFLRTERSSSGQSLRNIIDGIYQVVMKITMLVIRFTPLGIFALIAATVTRTGMDAIEPLAWFFLTVLVALA LHAFVFMPLLIVLAAKRSPLRHIQAMTPALLTAFSSASSAATLPLSMECVQKRSGVSTRTSSFVLPLGATVNMDGTALYE CVAAMFIAQAYGMDLSLATQFMIVITALLTSIGVASIPAASLVAITVILGAIGLPAEAIGLILVTDRVLDMCRTAVNVWG DSVVTVVLARSEGEETVLSLPVSKMEKVTTTDVH
Specific function: This carrier protein is part of the Na(+)-independent, binding-protein-independent glutamate-aspartate transport system [H]
COG id: COG1301
COG function: function code C; Na+/H+-dicarboxylate symporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:dicarboxylate (SDF) symporter (TC 2.A.23) family [H]
Homologues:
Organism=Homo sapiens, GI4827012, Length=457, Percent_Identity=34.1356673960613, Blast_Score=217, Evalue=1e-56, Organism=Homo sapiens, GI169790839, Length=425, Percent_Identity=34.1176470588235, Blast_Score=216, Evalue=4e-56, Organism=Homo sapiens, GI66773030, Length=399, Percent_Identity=34.3358395989975, Blast_Score=206, Evalue=4e-53, Organism=Homo sapiens, GI40254478, Length=430, Percent_Identity=31.1627906976744, Blast_Score=192, Evalue=6e-49, Organism=Homo sapiens, GI194239697, Length=470, Percent_Identity=30.4255319148936, Blast_Score=188, Evalue=9e-48, Organism=Homo sapiens, GI21314632, Length=434, Percent_Identity=28.8018433179723, Blast_Score=179, Evalue=7e-45, Organism=Homo sapiens, GI5032093, Length=409, Percent_Identity=31.7848410757946, Blast_Score=169, Evalue=4e-42, Organism=Homo sapiens, GI223468566, Length=251, Percent_Identity=36.6533864541833, Blast_Score=167, Evalue=2e-41, Organism=Homo sapiens, GI223468564, Length=251, Percent_Identity=36.6533864541833, Blast_Score=167, Evalue=2e-41, Organism=Homo sapiens, GI262359914, Length=376, Percent_Identity=31.6489361702128, Blast_Score=166, Evalue=4e-41, Organism=Homo sapiens, GI301601644, Length=182, Percent_Identity=39.010989010989, Blast_Score=128, Evalue=9e-30, Organism=Escherichia coli, GI1790514, Length=415, Percent_Identity=35.1807228915663, Blast_Score=245, Evalue=3e-66, Organism=Escherichia coli, GI1789947, Length=411, Percent_Identity=28.9537712895377, Blast_Score=155, Evalue=4e-39, Organism=Escherichia coli, GI1788024, Length=387, Percent_Identity=27.6485788113695, Blast_Score=128, Evalue=6e-31, Organism=Escherichia coli, GI1789473, Length=392, Percent_Identity=25.5102040816327, Blast_Score=105, Evalue=7e-24, Organism=Caenorhabditis elegans, GI71996953, Length=414, Percent_Identity=35.7487922705314, Blast_Score=236, Evalue=2e-62, Organism=Caenorhabditis elegans, GI17537407, Length=394, Percent_Identity=34.7715736040609, Blast_Score=207, Evalue=7e-54, Organism=Caenorhabditis elegans, GI71983106, Length=410, Percent_Identity=34.1463414634146, Blast_Score=207, Evalue=1e-53, Organism=Caenorhabditis elegans, GI71983099, Length=410, Percent_Identity=34.1463414634146, Blast_Score=206, Evalue=1e-53, Organism=Caenorhabditis elegans, GI193206505, Length=401, Percent_Identity=34.1645885286783, Blast_Score=202, Evalue=3e-52, Organism=Caenorhabditis elegans, GI193206654, Length=485, Percent_Identity=29.2783505154639, Blast_Score=182, Evalue=3e-46, Organism=Caenorhabditis elegans, GI17541374, Length=424, Percent_Identity=31.8396226415094, Blast_Score=169, Evalue=2e-42, Organism=Drosophila melanogaster, GI24583025, Length=400, Percent_Identity=32.75, Blast_Score=196, Evalue=3e-50, Organism=Drosophila melanogaster, GI17137668, Length=400, Percent_Identity=32.75, Blast_Score=196, Evalue=3e-50, Organism=Drosophila melanogaster, GI24583023, Length=400, Percent_Identity=32.75, Blast_Score=196, Evalue=3e-50, Organism=Drosophila melanogaster, GI281360481, Length=424, Percent_Identity=30.8962264150943, Blast_Score=142, Evalue=3e-34, Organism=Drosophila melanogaster, GI281360483, Length=424, Percent_Identity=30.8962264150943, Blast_Score=142, Evalue=4e-34, Organism=Drosophila melanogaster, GI17137666, Length=424, Percent_Identity=30.8962264150943, Blast_Score=142, Evalue=4e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001991 - InterPro: IPR018107 [H]
Pfam domain/function: PF00375 SDF [H]
EC number: NA
Molecular weight: Translated: 45864; Mature: 45864
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: PS00714 NA_DICARBOXYL_SYMP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKLHHQIFFAMLAGTLAGSFTAESSTLLGMPIISGYDLVGSLFINALKMVVIPLIVTAI CCHHHHHHHHHHHHHHHHCCCCCCCCCEECCCHHCHHHHHHHHHHHHHHHHHHHHHHHHH INGMVGVGDDENLGRMGLKTVVLYMSTTLVAVLIGLVAVNLFTPGIINGQPARDLLGLAT HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH ETQDALAKIDGRGVGDFTEILLQMLPPNLIAAAANGQMLGLIVFSLLFGFFLRTERSSSG HHHHHHHHHCCCCCCHHHHHHHHHCCCHHEEECCCCCHHHHHHHHHHHHHHHHHCCCCCH QSLRNIIDGIYQVVMKITMLVIRFTPLGIFALIAATVTRTGMDAIEPLAWFFLTVLVALA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH LHAFVFMPLLIVLAAKRSPLRHIQAMTPALLTAFSSASSAATLPLSMECVQKRSGVSTRT HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCC SSFVLPLGATVNMDGTALYECVAAMFIAQAYGMDLSLATQFMIVITALLTSIGVASIPAA CCEEEECCCEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHCCHH SLVAITVILGAIGLPAEAIGLILVTDRVLDMCRTAVNVWGDSVVTVVLARSEGEETVLSL HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEEEECCCCCHHEEEC PVSKMEKVTTTDVH CHHHHHHHHCCCCC >Mature Secondary Structure MMKLHHQIFFAMLAGTLAGSFTAESSTLLGMPIISGYDLVGSLFINALKMVVIPLIVTAI CCHHHHHHHHHHHHHHHHCCCCCCCCCEECCCHHCHHHHHHHHHHHHHHHHHHHHHHHHH INGMVGVGDDENLGRMGLKTVVLYMSTTLVAVLIGLVAVNLFTPGIINGQPARDLLGLAT HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH ETQDALAKIDGRGVGDFTEILLQMLPPNLIAAAANGQMLGLIVFSLLFGFFLRTERSSSG HHHHHHHHHCCCCCCHHHHHHHHHCCCHHEEECCCCCHHHHHHHHHHHHHHHHHCCCCCH QSLRNIIDGIYQVVMKITMLVIRFTPLGIFALIAATVTRTGMDAIEPLAWFFLTVLVALA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH LHAFVFMPLLIVLAAKRSPLRHIQAMTPALLTAFSSASSAATLPLSMECVQKRSGVSTRT HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCC SSFVLPLGATVNMDGTALYECVAAMFIAQAYGMDLSLATQFMIVITALLTSIGVASIPAA CCEEEECCCEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHCCHH SLVAITVILGAIGLPAEAIGLILVTDRVLDMCRTAVNVWGDSVVTVVLARSEGEETVLSL HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEEEECCCCCHHEEEC PVSKMEKVTTTDVH CHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-aspartate [Periplasm]; Proton [Periplasm]; L-glutamate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + L-aspartate [Periplasm] = Proton [Cytoplasm] + L-aspartate [Cytoplasm] Proton [Periplasm] + L-glutamate [Periplasm] = Proton [Cytoplasm] + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1971622; 1551855; 8265357; 9278503 [H]