Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is 110834184

Identifier: 110834184

GI number: 110834184

Start: 1500385

End: 1501176

Strand: Direct

Name: 110834184

Synonym: ABO_1323

Alternate gene names: NA

Gene position: 1500385-1501176 (Clockwise)

Preceding gene: 110834183

Following gene: 110834186

Centisome position: 48.09

GC content: 51.14

Gene sequence:

>792_bases
GTGCCCCAACCCCCGACCCAAGAAGAAGATACCCGGCCATTTGTGGCTCCATGCCACAGCATTGATAACACCGCACCGCT
GCGTTGGTTGCGCAAAGGGTGGCGCGACTTTCTTAATGCACCGGGGCCAAGCCTGCTCTATGGCGCGATAATGGTCTTTA
TCAGCTACCTAATTAGTGCCGCGACCTGGTGGTTCGGCAATATGGGCCTGTATCTTGGCCTACTTTCAGGCTTTGTGTTC
TTGGGGCCGCTACTCGCACTCAATCTTTACGCCATTAGTATCCAGTTGCAACAAGGCCGCCAACCAAGCCTGTCAGAAAG
TCTGAAGCAGGCACGTTCATGCTTGGGGGATGCCCTGACCTTTACGGTCATTCTGGTGGTGGTATTTTTGGTGTGGGCCA
GGGCCGCTAATTTGATCTATATCTTTTACCCGGTGAACGAGTGGCATTTGGAAAATGTGCTGCTTTTTTTTGGAGTCGGC
AGTAGCGTAGGAGCGTTATTTTGCGCCATCGTTTTCACGGTTAGTGCCTTTTCGTTGCCCATGATTATGGATCGCAAGAC
CGATATGGTCACGGGGGTTATCACGAGTACAAATGCGGTATTACGGAATAAGCTACCTCTATTTATCTGGGCCAGCTTGA
TTGGGGGTTGCCTATTGGTCGGGCTGTTAACAGCATATCTAGGTTTATTGGTGCTACTACCGGTACTTGGCTTTGCTACC
TGGCATGCTTACCGAGAGGTGATCGACGCAGAGGAATGGGAACCGCGATTTGAGTTGCCCAAAGAAGATTGA

Upstream 100 bases:

>100_bases
ATATGAATAACGATGACGTTACTGTGCAGTAACCTGGGTAGGCCGAGAAGCTCGCCTAGGTAAGTGGTTGTTTTCCTTTT
AAAGGTGAGAGGTGAGAGCC

Downstream 100 bases:

>100_bases
AATTTGACTGATAACACCACTACAGGGTCCGCCATGTGGCGGACCGATGCGGTGGTGTGCGGTCAGTAGACTTAATTTTC
GTCCATGTACCCGAGCAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: Cytochrome C Oxidase Subunit I; Conserved Integral Membrane Protein; Integral Membrane-Like Protein; Integral Membrane; Integral Membrane Protein-Like

Number of amino acids: Translated: 263; Mature: 262

Protein sequence:

>263_residues
MPQPPTQEEDTRPFVAPCHSIDNTAPLRWLRKGWRDFLNAPGPSLLYGAIMVFISYLISAATWWFGNMGLYLGLLSGFVF
LGPLLALNLYAISIQLQQGRQPSLSESLKQARSCLGDALTFTVILVVVFLVWARAANLIYIFYPVNEWHLENVLLFFGVG
SSVGALFCAIVFTVSAFSLPMIMDRKTDMVTGVITSTNAVLRNKLPLFIWASLIGGCLLVGLLTAYLGLLVLLPVLGFAT
WHAYREVIDAEEWEPRFELPKED

Sequences:

>Translated_263_residues
MPQPPTQEEDTRPFVAPCHSIDNTAPLRWLRKGWRDFLNAPGPSLLYGAIMVFISYLISAATWWFGNMGLYLGLLSGFVF
LGPLLALNLYAISIQLQQGRQPSLSESLKQARSCLGDALTFTVILVVVFLVWARAANLIYIFYPVNEWHLENVLLFFGVG
SSVGALFCAIVFTVSAFSLPMIMDRKTDMVTGVITSTNAVLRNKLPLFIWASLIGGCLLVGLLTAYLGLLVLLPVLGFAT
WHAYREVIDAEEWEPRFELPKED
>Mature_262_residues
PQPPTQEEDTRPFVAPCHSIDNTAPLRWLRKGWRDFLNAPGPSLLYGAIMVFISYLISAATWWFGNMGLYLGLLSGFVFL
GPLLALNLYAISIQLQQGRQPSLSESLKQARSCLGDALTFTVILVVVFLVWARAANLIYIFYPVNEWHLENVLLFFGVGS
SVGALFCAIVFTVSAFSLPMIMDRKTDMVTGVITSTNAVLRNKLPLFIWASLIGGCLLVGLLTAYLGLLVLLPVLGFATW
HAYREVIDAEEWEPRFELPKED

Specific function: Unknown

COG id: COG5473

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29291; Mature: 29160

Theoretical pI: Translated: 5.69; Mature: 5.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQPPTQEEDTRPFVAPCHSIDNTAPLRWLRKGWRDFLNAPGPSLLYGAIMVFISYLISA
CCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
ATWWFGNMGLYLGLLSGFVFLGPLLALNLYAISIQLQQGRQPSLSESLKQARSCLGDALT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHH
FTVILVVVFLVWARAANLIYIFYPVNEWHLENVLLFFGVGSSVGALFCAIVFTVSAFSLP
HHHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHH
MIMDRKTDMVTGVITSTNAVLRNKLPLFIWASLIGGCLLVGLLTAYLGLLVLLPVLGFAT
HHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WHAYREVIDAEEWEPRFELPKED
HHHHHHHHCHHCCCCCCCCCCCC
>Mature Secondary Structure 
PQPPTQEEDTRPFVAPCHSIDNTAPLRWLRKGWRDFLNAPGPSLLYGAIMVFISYLISA
CCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
ATWWFGNMGLYLGLLSGFVFLGPLLALNLYAISIQLQQGRQPSLSESLKQARSCLGDALT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHH
FTVILVVVFLVWARAANLIYIFYPVNEWHLENVLLFFGVGSSVGALFCAIVFTVSAFSLP
HHHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHH
MIMDRKTDMVTGVITSTNAVLRNKLPLFIWASLIGGCLLVGLLTAYLGLLVLLPVLGFAT
HHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WHAYREVIDAEEWEPRFELPKED
HHHHHHHHCHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA