| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is ppsA [C]
Identifier: 110834183
GI number: 110834183
Start: 1498283
End: 1500316
Strand: Direct
Name: ppsA [C]
Synonym: ABO_1322
Alternate gene names: 110834183
Gene position: 1498283-1500316 (Clockwise)
Preceding gene: 110834182
Following gene: 110834184
Centisome position: 48.02
GC content: 53.64
Gene sequence:
>2034_bases ATGAGCATTGAAGTACTGACTGCGGATATTGAGGGCGGCGAAAACTTGCAGCGTTGGGCTGCCATGGGCTTACCTATTCC GCCAAGTTGGCGCATTAGTCGTCAAGTTATAACAGGCAATTCTGTTCAGTGGTTGACGCAACAGCTTGCTACCTTGGCAC ACATGTTTTCAGGCGACCGTTACTGGGTGTTGCAACAAGGGCCAATGAATCCGGAGTCACGTCGAGAAAGCCTGTTAAAT CTGGATTCAGATGAAGCGCTCGCTGCGGCACTTCAACGCATTTTCCAGCGTGCTCCAGGGCCAGATCATGTGGTGATTCA AGCGTTACCAAAACAACACGCTGCCGGCGTGCTATTTACCCGACACCCTTTGCGCCAAGATCTACCGCATATGGTGGTTG AAGGAGTCGTAGGTGGTAACAGTGAACGTCAGCGGCTTATTTTCGATGAAAATGACCGGTTGGTGTATGCCCCTGAGGCT CAATTGCCTTTAAACCAACAGGTCGGTGAAGCCCTTTTTTGTCGGCTTCACCGTCAGCTTAAAGATAATTTTAAACATCC ACAGGCTGGAGAGTGGGTTTTTGATGGTGAGCAACTATGGCTGTTGCAAACCCTTCCTGTAGGTTCGCTCTCTGTACCCA AAGAAGCCTGGGCCCGCCGGGCTGGGGTAGGGCTTTTCAATCAGGTGGAAACTCCTCTGTGGTATACCCTGGCCGGGCGA TGGTTAAAAGCCGGCTTCTGGGAACCGCTAGTAGAAAGTGCCGGGTGGAAAGGGCTCGCCAAGGTTGAACCTTACCGGCG TCAACATAGCCATATTTACACCAATTGTGCGTTCTTTCGTGAGCTTCAGCGCGAACACCCAGGGGCCGCACGATTTGTGC CACCAGCATGGCAATCTCTGGAATGTGACCCTGCATCTGCTCCACAAACGGTAGGCTCCTCATTTTCTAAGAGCATTAAC CAATGGCGGCAGAGCTGGATCTTGTTGGAGCTGTCACTGAATGTGCAGAAGTGGAAGCAACCAGAGGTAACCCGTGAGGG CCTATGGCGCGCTTTTATGCGCCTTGATGCCATGGGAGAGTCCCTTAGCCGCGTAGAAGGTGAGCTTGCCTACCTAAGGC TGGCAGATGCATTGGTCGATTATCGTGCGCCTCTGCCTTTGACGTTGCTGGTTACGCCTACTGAACTTCGGGCCCTGCAA TCCCTGGTGGCTGGCGAGGTGGATTCGGTACGTGATACAGCATTACGACCGGGTGTTGATCCTGTCCATGCCCCCTTGAA TGAGGGGCCGGCTCAAGCGTCTACACTTAATAGATTGCAACAACCGGGAATCGTTAGCGACGCCCCGTTGGCGCAACTCT CAGATGCGGACGAGCAGGCATTTAAAATGGCACGAACCGCTCGCGGGCTGCGTTTTGCTATTGGTAATCGTCTACGGCAA CTACTTCGTTCCATGGCGGCTATTGCGGTTGAGCAAGGGACGCTACAACACCTTGATGATATTCATTTTCTGTACTTTGA TGAGCTTTGGCAGCTGTGGATGGGATCAGCATTGCCTGCCAGCGCCAATAAAGCTGTGATCGGTGATCGTAAACTGCGTT ACCTTGATGATGGCCTACAGGGAGCGCCGGACTGGAAGATGGACCAAGTAGGGTACGGTTTTGGCGGCGGACAGCGTCTT AGCCCTCTATTACGTGGGCTGACGCTGGTGCCTGGTTCTGCTGAAGGTGCCATTCGCCGTGTATGCAGTGCCTGGTGCCT TAACAAGGTACAGCCTGGCGACATTGTTGTGGTAGATGAGGTCGATCCCGCTTGGTTGCCCTGGCTGGTACAAGCAGCAG GGCTGGTGATTGCCCAACAGGACCCTGCTAACGGCGCGGCTAGCTTAGCTGTGACATATGGGATTCCCGCTATTTGGGGC GCCAGCGACGTGATGCATAGTGTTCAGGATGCGCTGCAGGGCACTCTAGACGCGACCCATGGCAAGCTTGCCATGGCGTC GGATATGAATAACGATGACGTTACTGTGCAGTAA
Upstream 100 bases:
>100_bases GCCAGTTCTTTACTGGTTCGGTTTGTGGGGAGCGCGCATAGTGCTTCAGCACCCAGCAGATAACTGACAAACGATCGGCA AAACAAATAAGAAACGGCTA
Downstream 100 bases:
>100_bases CCTGGGTAGGCCGAGAAGCTCGCCTAGGTAAGTGGTTGTTTTCCTTTTAAAGGTGAGAGGTGAGAGCCGTGCCCCAACCC CCGACCCAAGAAGAAGATAC
Product: hypothetical protein
Products: AMP; H+; Phosphoenolpyruvate; Phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 677; Mature: 676
Protein sequence:
>677_residues MSIEVLTADIEGGENLQRWAAMGLPIPPSWRISRQVITGNSVQWLTQQLATLAHMFSGDRYWVLQQGPMNPESRRESLLN LDSDEALAAALQRIFQRAPGPDHVVIQALPKQHAAGVLFTRHPLRQDLPHMVVEGVVGGNSERQRLIFDENDRLVYAPEA QLPLNQQVGEALFCRLHRQLKDNFKHPQAGEWVFDGEQLWLLQTLPVGSLSVPKEAWARRAGVGLFNQVETPLWYTLAGR WLKAGFWEPLVESAGWKGLAKVEPYRRQHSHIYTNCAFFRELQREHPGAARFVPPAWQSLECDPASAPQTVGSSFSKSIN QWRQSWILLELSLNVQKWKQPEVTREGLWRAFMRLDAMGESLSRVEGELAYLRLADALVDYRAPLPLTLLVTPTELRALQ SLVAGEVDSVRDTALRPGVDPVHAPLNEGPAQASTLNRLQQPGIVSDAPLAQLSDADEQAFKMARTARGLRFAIGNRLRQ LLRSMAAIAVEQGTLQHLDDIHFLYFDELWQLWMGSALPASANKAVIGDRKLRYLDDGLQGAPDWKMDQVGYGFGGGQRL SPLLRGLTLVPGSAEGAIRRVCSAWCLNKVQPGDIVVVDEVDPAWLPWLVQAAGLVIAQQDPANGAASLAVTYGIPAIWG ASDVMHSVQDALQGTLDATHGKLAMASDMNNDDVTVQ
Sequences:
>Translated_677_residues MSIEVLTADIEGGENLQRWAAMGLPIPPSWRISRQVITGNSVQWLTQQLATLAHMFSGDRYWVLQQGPMNPESRRESLLN LDSDEALAAALQRIFQRAPGPDHVVIQALPKQHAAGVLFTRHPLRQDLPHMVVEGVVGGNSERQRLIFDENDRLVYAPEA QLPLNQQVGEALFCRLHRQLKDNFKHPQAGEWVFDGEQLWLLQTLPVGSLSVPKEAWARRAGVGLFNQVETPLWYTLAGR WLKAGFWEPLVESAGWKGLAKVEPYRRQHSHIYTNCAFFRELQREHPGAARFVPPAWQSLECDPASAPQTVGSSFSKSIN QWRQSWILLELSLNVQKWKQPEVTREGLWRAFMRLDAMGESLSRVEGELAYLRLADALVDYRAPLPLTLLVTPTELRALQ SLVAGEVDSVRDTALRPGVDPVHAPLNEGPAQASTLNRLQQPGIVSDAPLAQLSDADEQAFKMARTARGLRFAIGNRLRQ LLRSMAAIAVEQGTLQHLDDIHFLYFDELWQLWMGSALPASANKAVIGDRKLRYLDDGLQGAPDWKMDQVGYGFGGGQRL SPLLRGLTLVPGSAEGAIRRVCSAWCLNKVQPGDIVVVDEVDPAWLPWLVQAAGLVIAQQDPANGAASLAVTYGIPAIWG ASDVMHSVQDALQGTLDATHGKLAMASDMNNDDVTVQ >Mature_676_residues SIEVLTADIEGGENLQRWAAMGLPIPPSWRISRQVITGNSVQWLTQQLATLAHMFSGDRYWVLQQGPMNPESRRESLLNL DSDEALAAALQRIFQRAPGPDHVVIQALPKQHAAGVLFTRHPLRQDLPHMVVEGVVGGNSERQRLIFDENDRLVYAPEAQ LPLNQQVGEALFCRLHRQLKDNFKHPQAGEWVFDGEQLWLLQTLPVGSLSVPKEAWARRAGVGLFNQVETPLWYTLAGRW LKAGFWEPLVESAGWKGLAKVEPYRRQHSHIYTNCAFFRELQREHPGAARFVPPAWQSLECDPASAPQTVGSSFSKSINQ WRQSWILLELSLNVQKWKQPEVTREGLWRAFMRLDAMGESLSRVEGELAYLRLADALVDYRAPLPLTLLVTPTELRALQS LVAGEVDSVRDTALRPGVDPVHAPLNEGPAQASTLNRLQQPGIVSDAPLAQLSDADEQAFKMARTARGLRFAIGNRLRQL LRSMAAIAVEQGTLQHLDDIHFLYFDELWQLWMGSALPASANKAVIGDRKLRYLDDGLQGAPDWKMDQVGYGFGGGQRLS PLLRGLTLVPGSAEGAIRRVCSAWCLNKVQPGDIVVVDEVDPAWLPWLVQAAGLVIAQQDPANGAASLAVTYGIPAIWGA SDVMHSVQDALQGTLDATHGKLAMASDMNNDDVTVQ
Specific function: ESSENTIAL STEP IN GLUCONEOGENESIS WHEN PYRUVATE AND LACTATE ARE USED AS A CARBON SOURCE. [C]
COG id: COG0574
COG function: function code G; Phosphoenolpyruvate synthase/pyruvate phosphate dikinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.7.9.2 [C]
Molecular weight: Translated: 74995; Mature: 74864
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: PS00422 GRANINS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIEVLTADIEGGENLQRWAAMGLPIPPSWRISRQVITGNSVQWLTQQLATLAHMFSGDR CCEEEEEEECCCCCHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCE YWVLQQGPMNPESRRESLLNLDSDEALAAALQRIFQRAPGPDHVVIQALPKQHAAGVLFT EEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCHHHCCCEEEE RHPLRQDLPHMVVEGVVGGNSERQRLIFDENDRLVYAPEAQLPLNQQVGEALFCRLHRQL CCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEECCCCCCCCHHHHHHHHHHHHHHHH KDNFKHPQAGEWVFDGEQLWLLQTLPVGSLSVPKEAWARRAGVGLFNQVETPLWYTLAGR HHCCCCCCCCCEEECCCEEEEEEECCCCCCCCCHHHHHHHHCCCHHHHHCCCHHHHHHHH WLKAGFWEPLVESAGWKGLAKVEPYRRQHSHIYTNCAFFRELQREHPGAARFVPPAWQSL HHHHCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC ECDPASAPQTVGSSFSKSINQWRQSWILLELSLNVQKWKQPEVTREGLWRAFMRLDAMGE CCCCCCCCHHHHHHHHHHHHHHHHCEEEEEEECCHHHCCCCCHHHHHHHHHHHHHHHHHH SLSRVEGELAYLRLADALVDYRAPLPLTLLVTPTELRALQSLVAGEVDSVRDTALRPGVD HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHCCHHHHHHHHHCCCCC PVHAPLNEGPAQASTLNRLQQPGIVSDAPLAQLSDADEQAFKMARTARGLRFAIGNRLRQ CCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHH LLRSMAAIAVEQGTLQHLDDIHFLYFDELWQLWMGSALPASANKAVIGDRKLRYLDDGLQ HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHCCCC GAPDWKMDQVGYGFGGGQRLSPLLRGLTLVPGSAEGAIRRVCSAWCLNKVQPGDIVVVDE CCCCCCHHHCCCCCCCCHHHHHHHCCCEECCCCCHHHHHHHHHHHHHCCCCCCCEEEEEC VDPAWLPWLVQAAGLVIAQQDPANGAASLAVTYGIPAIWGASDVMHSVQDALQGTLDATH CCCHHHHHHHHHCCEEEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCC GKLAMASDMNNDDVTVQ CCEEEECCCCCCCCEEC >Mature Secondary Structure SIEVLTADIEGGENLQRWAAMGLPIPPSWRISRQVITGNSVQWLTQQLATLAHMFSGDR CEEEEEEECCCCCHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCE YWVLQQGPMNPESRRESLLNLDSDEALAAALQRIFQRAPGPDHVVIQALPKQHAAGVLFT EEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCHHHCCCEEEE RHPLRQDLPHMVVEGVVGGNSERQRLIFDENDRLVYAPEAQLPLNQQVGEALFCRLHRQL CCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEECCCCCCCCHHHHHHHHHHHHHHHH KDNFKHPQAGEWVFDGEQLWLLQTLPVGSLSVPKEAWARRAGVGLFNQVETPLWYTLAGR HHCCCCCCCCCEEECCCEEEEEEECCCCCCCCCHHHHHHHHCCCHHHHHCCCHHHHHHHH WLKAGFWEPLVESAGWKGLAKVEPYRRQHSHIYTNCAFFRELQREHPGAARFVPPAWQSL HHHHCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC ECDPASAPQTVGSSFSKSINQWRQSWILLELSLNVQKWKQPEVTREGLWRAFMRLDAMGE CCCCCCCCHHHHHHHHHHHHHHHHCEEEEEEECCHHHCCCCCHHHHHHHHHHHHHHHHHH SLSRVEGELAYLRLADALVDYRAPLPLTLLVTPTELRALQSLVAGEVDSVRDTALRPGVD HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHCCHHHHHHHHHCCCCC PVHAPLNEGPAQASTLNRLQQPGIVSDAPLAQLSDADEQAFKMARTARGLRFAIGNRLRQ CCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHH LLRSMAAIAVEQGTLQHLDDIHFLYFDELWQLWMGSALPASANKAVIGDRKLRYLDDGLQ HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHCCCC GAPDWKMDQVGYGFGGGQRLSPLLRGLTLVPGSAEGAIRRVCSAWCLNKVQPGDIVVVDE CCCCCCHHHCCCCCCCCHHHHHHHCCCEECCCCCHHHHHHHHHHHHHCCCCCCCEEEEEC VDPAWLPWLVQAAGLVIAQQDPANGAASLAVTYGIPAIWGASDVMHSVQDALQGTLDATH CCCHHHHHHHHHCCEEEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCC GKLAMASDMNNDDVTVQ CCEEEECCCCCCCCEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Mg2+; Mn2+ [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): 10.5 {phosphate}} 0.028 {ATP}} 0.083 {pyruvate}} [C]
Substrates: ATP; H2O; Pyruvate [C]
Specific reaction: ATP + H2O + Pyruvate --> AMP + (2) H+ + Phosphoenolpyruvate + Phosphate [C]
General reaction: Phospho group transfer [C]
Inhibitor: 2-Oxoglutarate; 3-Phosphoglyceraldehyde; 5'-Adenylyl methylen ediphosphonate; ADP; ADP glucose; AMP; ATP; Ca2+; F-; Iodoacetate; Malate; Mg2+; Mn2+; Oxalacetate; PCMB; Phosphoenolpyruvate; Sulfhydryl reagents [C]
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA