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The map label for this gene is nudC [H]

Identifier: 110834089

GI number: 110834089

Start: 1399410

End: 1400240

Strand: Direct

Name: nudC [H]

Synonym: ABO_1228

Alternate gene names: 110834089

Gene position: 1399410-1400240 (Clockwise)

Preceding gene: 110834088

Following gene: 110834090

Centisome position: 44.85

GC content: 50.9

Gene sequence:

>831_bases
GTGTTTGAGCCCATCGCAATAGAGACAGCCATGATTGACCTTTCTTCACCGGAATCCCAAGACGCAGAAAGCGCTCGCTG
TTATATCATTCATGAGCAGGATGTGTTGATCTGCGCACATGTGGATAGGCCGTTCCCAGAACTGCCTGCCAAGTGGCTTC
GGCAGCATCCTGATTATCACTTCTTGGGTTTTCTGGATGGCCAGCCTTGTTATGTCTGTGAATTTGCCTGCCATGAATTT
GATGATGGCCGGTTACAGCGTGTTCCGTTGCGCAGACTTATCGGTGCCACCTTAAATGACGCCGAATTTTCCATGGCGAG
CAGGGCCTTACAGTTTCTAAGCTGGCGCAAAAATCATCGTTTTTGTAGCCGATGCGGCTCACCGACTGAGCCACATCCTC
GCGACTTAGCGATGACCTGTGCCGGTTGCGGCTATTTTCAGTATCCCCGTATTACTCCCTGTATCATTACGTTGGTGACG
GATGGTGAGCATGCTTTGCTGGGGCGTTCTGCCCGTTTTCCGGAAGGCTTTTACTCCTGTCTGGCCGGCTTTATGGAGGC
AGGTGAAACCGCTGAGCAAGCTTTGGCACGGGAGGTGATGGAAGAAAGCGGCATTTCGGTGAAAAACTTGGAATATTTGA
ACAGCCAGTCGTGGCCTTTTCCCCACTCCTTGATGCTTGGGTTCATGGCTGAATATGCAGGTGGAGAGATCCGCATTGAT
GACGATGAAATCGTCGATGCAGCTTGGTTTCATTATCAGGATCTGCCCATGGTTCCACCGGTGGGAACTATTGCCCGTTT
GTTGATTGACCAATGGATCGCACGTTTTTAG

Upstream 100 bases:

>100_bases
TACTACTTGGAAAGTATGGAAGAGCAAAAGCCCATTGGTGATGGTGTTCTGGAGGTGGCTGAGCAAAGCATGAATGTATT
AGGCTTTCCCGTGTCAAAGG

Downstream 100 bases:

>100_bases
AAGGACGTAAGCATGAATTACACTTTAGCTCCCTTGGTGCTAATCGTTTTCAGTCTACTTTTGGTATTGATAGGGGCGTG
GATTCTGCTGCGGCAAAAAT

Product: NADH pyrophosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MFEPIAIETAMIDLSSPESQDAESARCYIIHEQDVLICAHVDRPFPELPAKWLRQHPDYHFLGFLDGQPCYVCEFACHEF
DDGRLQRVPLRRLIGATLNDAEFSMASRALQFLSWRKNHRFCSRCGSPTEPHPRDLAMTCAGCGYFQYPRITPCIITLVT
DGEHALLGRSARFPEGFYSCLAGFMEAGETAEQALAREVMEESGISVKNLEYLNSQSWPFPHSLMLGFMAEYAGGEIRID
DDEIVDAAWFHYQDLPMVPPVGTIARLLIDQWIARF

Sequences:

>Translated_276_residues
MFEPIAIETAMIDLSSPESQDAESARCYIIHEQDVLICAHVDRPFPELPAKWLRQHPDYHFLGFLDGQPCYVCEFACHEF
DDGRLQRVPLRRLIGATLNDAEFSMASRALQFLSWRKNHRFCSRCGSPTEPHPRDLAMTCAGCGYFQYPRITPCIITLVT
DGEHALLGRSARFPEGFYSCLAGFMEAGETAEQALAREVMEESGISVKNLEYLNSQSWPFPHSLMLGFMAEYAGGEIRID
DDEIVDAAWFHYQDLPMVPPVGTIARLLIDQWIARF
>Mature_276_residues
MFEPIAIETAMIDLSSPESQDAESARCYIIHEQDVLICAHVDRPFPELPAKWLRQHPDYHFLGFLDGQPCYVCEFACHEF
DDGRLQRVPLRRLIGATLNDAEFSMASRALQFLSWRKNHRFCSRCGSPTEPHPRDLAMTCAGCGYFQYPRITPCIITLVT
DGEHALLGRSARFPEGFYSCLAGFMEAGETAEQALAREVMEESGISVKNLEYLNSQSWPFPHSLMLGFMAEYAGGEIRID
DDEIVDAAWFHYQDLPMVPPVGTIARLLIDQWIARF

Specific function: Unknown

COG id: COG2816

COG function: function code L; NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI13899267, Length=197, Percent_Identity=38.5786802030457, Blast_Score=137, Evalue=8e-33,
Organism=Homo sapiens, GI50593112, Length=200, Percent_Identity=36.5, Blast_Score=131, Evalue=6e-31,
Organism=Escherichia coli, GI48994995, Length=213, Percent_Identity=42.7230046948357, Blast_Score=181, Evalue=5e-47,
Organism=Caenorhabditis elegans, GI71986510, Length=225, Percent_Identity=28, Blast_Score=88, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI212645999, Length=225, Percent_Identity=28, Blast_Score=88, Evalue=5e-18,
Organism=Saccharomyces cerevisiae, GI6321371, Length=191, Percent_Identity=32.9842931937173, Blast_Score=99, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015375
- InterPro:   IPR022925
- InterPro:   IPR000086
- InterPro:   IPR015797
- InterPro:   IPR015376 [H]

Pfam domain/function: PF00293 NUDIX; PF09296 NUDIX-like; PF09297 zf-NADH-PPase [H]

EC number: =3.6.1.22 [H]

Molecular weight: Translated: 31332; Mature: 31332

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFEPIAIETAMIDLSSPESQDAESARCYIIHEQDVLICAHVDRPFPELPAKWLRQHPDYH
CCCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCHHHHHHHHCCCEE
FLGFLDGQPCYVCEFACHEFDDGRLQRVPLRRLIGATLNDAEFSMASRALQFLSWRKNHR
EEEEECCCCEEEEEEHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCH
FCSRCGSPTEPHPRDLAMTCAGCGYFQYPRITPCIITLVTDGEHALLGRSARFPEGFYSC
HHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCEEEEEEEECCCHHHHCCCCCCCHHHHHH
LAGFMEAGETAEQALAREVMEESGISVKNLEYLNSQSWPFPHSLMLGFMAEYAGGEIRID
HHHHHHCCHHHHHHHHHHHHHHCCCCEEHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEC
DDEIVDAAWFHYQDLPMVPPVGTIARLLIDQWIARF
HHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFEPIAIETAMIDLSSPESQDAESARCYIIHEQDVLICAHVDRPFPELPAKWLRQHPDYH
CCCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCHHHHHHHHCCCEE
FLGFLDGQPCYVCEFACHEFDDGRLQRVPLRRLIGATLNDAEFSMASRALQFLSWRKNHR
EEEEECCCCEEEEEEHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCH
FCSRCGSPTEPHPRDLAMTCAGCGYFQYPRITPCIITLVTDGEHALLGRSARFPEGFYSC
HHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCEEEEEEEECCCHHHHCCCCCCCHHHHHH
LAGFMEAGETAEQALAREVMEESGISVKNLEYLNSQSWPFPHSLMLGFMAEYAGGEIRID
HHHHHHCCHHHHHHHHHHHHHHCCCCEEHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEC
DDEIVDAAWFHYQDLPMVPPVGTIARLLIDQWIARF
HHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA