| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
Click here to switch to the map view.
The map label for this gene is 110834090
Identifier: 110834090
GI number: 110834090
Start: 1400253
End: 1400900
Strand: Direct
Name: 110834090
Synonym: ABO_1229
Alternate gene names: NA
Gene position: 1400253-1400900 (Clockwise)
Preceding gene: 110834089
Following gene: 110834091
Centisome position: 44.88
GC content: 54.17
Gene sequence:
>648_bases ATGAATTACACTTTAGCTCCCTTGGTGCTAATCGTTTTCAGTCTACTTTTGGTATTGATAGGGGCGTGGATTCTGCTGCG GCAAAAATGGGTGCTGCAATGGTTGAAAGGCACAGCCGGCCTGTTGTTGGTGGTGCTGGCTATCTATATGAGCGTGTTCG CGCTCAATCTCTATGGCTATAAGGAATATGCTCAGGAAGTGTCCGTAGCCACGGTGAGCTTCCGGGAGTCGGGCGATCAG TCGTTTATTGCTACGGTAACCCGCACGGATGGGAGTTCGGAAGAGTTTCGTCTGAAAGGGGATCAGTGGCAACTGGATGC TCGCATTATCAAGTGGAAGATGCCCTTTAGCCTGCTTGGCCTGAAGCCCGGCTACCAACTGGATCGGATGCAGGGCCGTT ATTATGCCCTTGAAGACGAGCGTTCCCGGGACCGTACCGTCTACAGCTTGCATCGTGATCCAGTAGGCCTGGATGTGTGG CTGCTGGCAAAAAAAGGCTGGGGCCTGATTATCGATGCTCGTTACGGTAGCGCGGCTTATCTGCCGATGGCAGATGGCGC TCTGTTTGAAGTTACCGTGGCGCCCACAGGGCTCGTGGCCCGTCCTATGAACGGCAGTGCACAAAAGGCGATCGCCGGTT GGGATTGA
Upstream 100 bases:
>100_bases TTGGTTTCATTATCAGGATCTGCCCATGGTTCCACCGGTGGGAACTATTGCCCGTTTGTTGATTGACCAATGGATCGCAC GTTTTTAGAAGGACGTAAGC
Downstream 100 bases:
>100_bases TGCTTCTTTCCCGGTAACCTGTGTTTTGCTCGACCTTTAATTCCCTCTGATTACCGCAATGGCTCTGGCTTATGTAGAAT CAGCCAGAGTTCGATTTCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MNYTLAPLVLIVFSLLLVLIGAWILLRQKWVLQWLKGTAGLLLVVLAIYMSVFALNLYGYKEYAQEVSVATVSFRESGDQ SFIATVTRTDGSSEEFRLKGDQWQLDARIIKWKMPFSLLGLKPGYQLDRMQGRYYALEDERSRDRTVYSLHRDPVGLDVW LLAKKGWGLIIDARYGSAAYLPMADGALFEVTVAPTGLVARPMNGSAQKAIAGWD
Sequences:
>Translated_215_residues MNYTLAPLVLIVFSLLLVLIGAWILLRQKWVLQWLKGTAGLLLVVLAIYMSVFALNLYGYKEYAQEVSVATVSFRESGDQ SFIATVTRTDGSSEEFRLKGDQWQLDARIIKWKMPFSLLGLKPGYQLDRMQGRYYALEDERSRDRTVYSLHRDPVGLDVW LLAKKGWGLIIDARYGSAAYLPMADGALFEVTVAPTGLVARPMNGSAQKAIAGWD >Mature_215_residues MNYTLAPLVLIVFSLLLVLIGAWILLRQKWVLQWLKGTAGLLLVVLAIYMSVFALNLYGYKEYAQEVSVATVSFRESGDQ SFIATVTRTDGSSEEFRLKGDQWQLDARIIKWKMPFSLLGLKPGYQLDRMQGRYYALEDERSRDRTVYSLHRDPVGLDVW LLAKKGWGLIIDARYGSAAYLPMADGALFEVTVAPTGLVARPMNGSAQKAIAGWD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24158; Mature: 24158
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYTLAPLVLIVFSLLLVLIGAWILLRQKWVLQWLKGTAGLLLVVLAIYMSVFALNLYGY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH KEYAQEVSVATVSFRESGDQSFIATVTRTDGSSEEFRLKGDQWQLDARIIKWKMPFSLLG HHHHHHHHHEEEEECCCCCCEEEEEEEECCCCCCCEEECCCCEEEEEEEEEEECCHHEEC LKPGYQLDRMQGRYYALEDERSRDRTVYSLHRDPVGLDVWLLAKKGWGLIIDARYGSAAY CCCCCCHHCCCCCEEEECCCCCCCCEEEEECCCCCCEEEEEEEECCCEEEEECCCCCEEE LPMADGALFEVTVAPTGLVARPMNGSAQKAIAGWD EEECCCCEEEEEECCCCEEEECCCCCCCCCCCCCC >Mature Secondary Structure MNYTLAPLVLIVFSLLLVLIGAWILLRQKWVLQWLKGTAGLLLVVLAIYMSVFALNLYGY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH KEYAQEVSVATVSFRESGDQSFIATVTRTDGSSEEFRLKGDQWQLDARIIKWKMPFSLLG HHHHHHHHHEEEEECCCCCCEEEEEEEECCCCCCCEEECCCCEEEEEEEEEEECCHHEEC LKPGYQLDRMQGRYYALEDERSRDRTVYSLHRDPVGLDVWLLAKKGWGLIIDARYGSAAY CCCCCCHHCCCCCEEEECCCCCCCCEEEEECCCCCCEEEEEEEECCCEEEEECCCCCEEE LPMADGALFEVTVAPTGLVARPMNGSAQKAIAGWD EEECCCCEEEEEECCCCEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA