Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is 110834088

Identifier: 110834088

GI number: 110834088

Start: 1397738

End: 1399417

Strand: Direct

Name: 110834088

Synonym: ABO_1227

Alternate gene names: NA

Gene position: 1397738-1399417 (Clockwise)

Preceding gene: 110834086

Following gene: 110834089

Centisome position: 44.8

GC content: 52.14

Gene sequence:

>1680_bases
ATGGTTGCCATAACAAATACCACCTCCCTGACTTTTCTCAAAGAAGCCCTAGATGCCACCCTGACTGAAGCAGAAACACA
GCTTGAAACGTTTTCTGATGACCATAGTCGTCAAGATGAGTTGCAGCATTGTGCGCAAGCTTTTCAGCAACTTCGAGGTA
TCTGCCAGCTTGTTGAGCTGCCTGCGGCGGCGTTGATGAGTGAAGAAATGGCGCTGGCCGCGCGGGAGTTACAAGAAAAA
TGCTCTGACGCCCGTATTCAGGCGTTGAGCCACGCGATCGTTCTGCTTACCCGTTATTTCGATTACGTGCAATTGAAGAA
CCGCACGTTACCGGCACTGTTAATTGGTGGCATTAATGAGCTGCGACGGGCCGCTGGCAAGGGCCTGATCCAGGAAAGTC
ACTTCTTCTATGCCGATTTATCCCATCAACGTGTACCTCAAGCTCCGCAACGGAGCATGACCGTTAGTGAATTGTCCGAC
CTGGCGCGACGCTTTCGGCATATGTACCAGGTCGGGCTGCTTGGGATGCTTCGTGGCCAAACTAACCGCACTAACCTAAA
GCTGATGGCCCGGGCCCTGGTACGGCTGGATCATGCCGCAGGACAATGTGGTTTAAGTCGCTTTCTGTGGGTGTCCCAGG
CAGCGTTAACGGCCATGTACCGCGACCAGATGGCGATCACTCCGGCCCGAAAAGCGCTGCTGTCACAGTATGACCGCCAG
TTGAAAAAGCTGGTCTACAGTGGTGATCAGGCAGTGACGGAAGACGCTCCGTTACTGTTGATCAAGGAAAGCCTCTATAT
CGTTTCGTTGTCCGCACAGAACAGCGGTGTGATCGGTAACGTTAAGCAAGCTTTCGGTTTGAAATCTGAAGTGAATGATG
TTGTTTTGCAGCGAGAGTTGTTATTCATGACGGGCGCCAGCGGATCGGTGACTCGTTCTGTGGCCAGTGCTATGCGTGAT
GAAATTGCCGATTTGAAAGAGAGCCTGGATTTGGCCTCCCAGGGGGTGGCGGACACTAATTATGAGTCGGTGGCGGCAAG
CCTGAATCGTCTGGGTAGCACCCTGGATATGATCAATAAAGATAAAGAATCCCGTGCTATCAAACAGCGCGCACAGGACG
TGGCTCGCTGGGCGCCTGATCAGAACGTTGAAGGGGAGGCGTTCCATGCGCTGGTGGATGATCTACTGATTGTAGAAAAT
GTGGTTGCGGGTCTAGAGCGAAGCATTAACCCTGAAAATGATGTGCATCGCTCAGCAAACAATAGCCGTATTTCCCTGTA
TCAGTTAAATGACGCTCGCATGACAGTGGTGGGCGAGTGCCGTGCTGGTCTGGCGCTGGCTAAACGCTCTATTTCCTCGT
TCATGGATAACAACTGGGATGCTATGCATCTGTCTAATCTCCCCGGGACGTTCGCTTCCATTGCGGGGGGGTTAATGTTC
TTAGAACTGGATCGTGCCAAGGCGGTGACCGAAGCTTGTCACAAATATATCAGTAACCGGTTGCTCAGTGGTGACCAAGT
GCCGACCCATGAAAACATGGAAACCCTGGCCGATGCCCTGACCGGGGTGGACTACTACTTGGAAAGTATGGAAGAGCAAA
AGCCCATTGGTGATGGTGTTCTGGAGGTGGCTGAGCAAAGCATGAATGTATTAGGCTTTCCCGTGTCAAAGGGTGTTTGA

Upstream 100 bases:

>100_bases
TTTTACAATCTTAAATTGAATGTTGCGGGTATAACCGGGGGTTGCGTACTTTACGGGACAGCCTCGATGATAATAACAGT
TTGGTGCTTGCGGAGAGTCC

Downstream 100 bases:

>100_bases
GCCCATCGCAATAGAGACAGCCATGATTGACCTTTCTTCACCGGAATCCCAAGACGCAGAAAGCGCTCGCTGTTATATCA
TTCATGAGCAGGATGTGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: CheA Signal Transduction Histidine Kinases; PilL Protein; Hpt Domain Protein; Methyl-Accepting Chemotaxis Protein; Pilin Biosynthetic Protein; Sensor Histidine Kinase/Response Regulator ChpA; Component Of Chemotactic Signal Transduction System; Histidine Kinase Related Protein; Response Regulator Receiver; Sensor Kinase/Response Regulatory Fusion Protein; Two-Component Hybrid Chemotactic Sensor And Regulator; Chemotaxis Protein Histidine Kinase-Like Kinase; Chemotaxis-Related Protein Kinase

Number of amino acids: Translated: 559; Mature: 559

Protein sequence:

>559_residues
MVAITNTTSLTFLKEALDATLTEAETQLETFSDDHSRQDELQHCAQAFQQLRGICQLVELPAAALMSEEMALAARELQEK
CSDARIQALSHAIVLLTRYFDYVQLKNRTLPALLIGGINELRRAAGKGLIQESHFFYADLSHQRVPQAPQRSMTVSELSD
LARRFRHMYQVGLLGMLRGQTNRTNLKLMARALVRLDHAAGQCGLSRFLWVSQAALTAMYRDQMAITPARKALLSQYDRQ
LKKLVYSGDQAVTEDAPLLLIKESLYIVSLSAQNSGVIGNVKQAFGLKSEVNDVVLQRELLFMTGASGSVTRSVASAMRD
EIADLKESLDLASQGVADTNYESVAASLNRLGSTLDMINKDKESRAIKQRAQDVARWAPDQNVEGEAFHALVDDLLIVEN
VVAGLERSINPENDVHRSANNSRISLYQLNDARMTVVGECRAGLALAKRSISSFMDNNWDAMHLSNLPGTFASIAGGLMF
LELDRAKAVTEACHKYISNRLLSGDQVPTHENMETLADALTGVDYYLESMEEQKPIGDGVLEVAEQSMNVLGFPVSKGV

Sequences:

>Translated_559_residues
MVAITNTTSLTFLKEALDATLTEAETQLETFSDDHSRQDELQHCAQAFQQLRGICQLVELPAAALMSEEMALAARELQEK
CSDARIQALSHAIVLLTRYFDYVQLKNRTLPALLIGGINELRRAAGKGLIQESHFFYADLSHQRVPQAPQRSMTVSELSD
LARRFRHMYQVGLLGMLRGQTNRTNLKLMARALVRLDHAAGQCGLSRFLWVSQAALTAMYRDQMAITPARKALLSQYDRQ
LKKLVYSGDQAVTEDAPLLLIKESLYIVSLSAQNSGVIGNVKQAFGLKSEVNDVVLQRELLFMTGASGSVTRSVASAMRD
EIADLKESLDLASQGVADTNYESVAASLNRLGSTLDMINKDKESRAIKQRAQDVARWAPDQNVEGEAFHALVDDLLIVEN
VVAGLERSINPENDVHRSANNSRISLYQLNDARMTVVGECRAGLALAKRSISSFMDNNWDAMHLSNLPGTFASIAGGLMF
LELDRAKAVTEACHKYISNRLLSGDQVPTHENMETLADALTGVDYYLESMEEQKPIGDGVLEVAEQSMNVLGFPVSKGV
>Mature_559_residues
MVAITNTTSLTFLKEALDATLTEAETQLETFSDDHSRQDELQHCAQAFQQLRGICQLVELPAAALMSEEMALAARELQEK
CSDARIQALSHAIVLLTRYFDYVQLKNRTLPALLIGGINELRRAAGKGLIQESHFFYADLSHQRVPQAPQRSMTVSELSD
LARRFRHMYQVGLLGMLRGQTNRTNLKLMARALVRLDHAAGQCGLSRFLWVSQAALTAMYRDQMAITPARKALLSQYDRQ
LKKLVYSGDQAVTEDAPLLLIKESLYIVSLSAQNSGVIGNVKQAFGLKSEVNDVVLQRELLFMTGASGSVTRSVASAMRD
EIADLKESLDLASQGVADTNYESVAASLNRLGSTLDMINKDKESRAIKQRAQDVARWAPDQNVEGEAFHALVDDLLIVEN
VVAGLERSINPENDVHRSANNSRISLYQLNDARMTVVGECRAGLALAKRSISSFMDNNWDAMHLSNLPGTFASIAGGLMF
LELDRAKAVTEACHKYISNRLLSGDQVPTHENMETLADALTGVDYYLESMEEQKPIGDGVLEVAEQSMNVLGFPVSKGV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61610; Mature: 61610

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVAITNTTSLTFLKEALDATLTEAETQLETFSDDHSRQDELQHCAQAFQQLRGICQLVEL
CEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
PAAALMSEEMALAARELQEKCSDARIQALSHAIVLLTRYFDYVQLKNRTLPALLIGGINE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHH
LRRAAGKGLIQESHFFYADLSHQRVPQAPQRSMTVSELSDLARRFRHMYQVGLLGMLRGQ
HHHHHCCCCHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
TNRTNLKLMARALVRLDHAAGQCGLSRFLWVSQAALTAMYRDQMAITPARKALLSQYDRQ
CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
LKKLVYSGDQAVTEDAPLLLIKESLYIVSLSAQNSGVIGNVKQAFGLKSEVNDVVLQREL
HHHHHHCCCCCCCCCCCEEEEECCEEEEEEECCCCCCCCCHHHHHCCHHHHHHHHHHHHH
LFMTGASGSVTRSVASAMRDEIADLKESLDLASQGVADTNYESVAASLNRLGSTLDMINK
HHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCC
DKESRAIKQRAQDVARWAPDQNVEGEAFHALVDDLLIVENVVAGLERSINPENDVHRSAN
CHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCC
NSRISLYQLNDARMTVVGECRAGLALAKRSISSFMDNNWDAMHLSNLPGTFASIAGGLMF
CCEEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHCCCEE
LELDRAKAVTEACHKYISNRLLSGDQVPTHENMETLADALTGVDYYLESMEEQKPIGDGV
EEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHH
LEVAEQSMNVLGFPVSKGV
HHHHHHHHHHCCCCHHCCC
>Mature Secondary Structure
MVAITNTTSLTFLKEALDATLTEAETQLETFSDDHSRQDELQHCAQAFQQLRGICQLVEL
CEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
PAAALMSEEMALAARELQEKCSDARIQALSHAIVLLTRYFDYVQLKNRTLPALLIGGINE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHH
LRRAAGKGLIQESHFFYADLSHQRVPQAPQRSMTVSELSDLARRFRHMYQVGLLGMLRGQ
HHHHHCCCCHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
TNRTNLKLMARALVRLDHAAGQCGLSRFLWVSQAALTAMYRDQMAITPARKALLSQYDRQ
CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
LKKLVYSGDQAVTEDAPLLLIKESLYIVSLSAQNSGVIGNVKQAFGLKSEVNDVVLQREL
HHHHHHCCCCCCCCCCCEEEEECCEEEEEEECCCCCCCCCHHHHHCCHHHHHHHHHHHHH
LFMTGASGSVTRSVASAMRDEIADLKESLDLASQGVADTNYESVAASLNRLGSTLDMINK
HHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCC
DKESRAIKQRAQDVARWAPDQNVEGEAFHALVDDLLIVENVVAGLERSINPENDVHRSAN
CHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCC
NSRISLYQLNDARMTVVGECRAGLALAKRSISSFMDNNWDAMHLSNLPGTFASIAGGLMF
CCEEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHCCCEE
LELDRAKAVTEACHKYISNRLLSGDQVPTHENMETLADALTGVDYYLESMEEQKPIGDGV
EEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHH
LEVAEQSMNVLGFPVSKGV
HHHHHHHHHHCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA