| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110833958
Identifier: 110833958
GI number: 110833958
Start: 1244623
End: 1246155
Strand: Direct
Name: 110833958
Synonym: ABO_1097
Alternate gene names: NA
Gene position: 1244623-1246155 (Clockwise)
Preceding gene: 110833957
Following gene: 110833959
Centisome position: 39.89
GC content: 55.71
Gene sequence:
>1533_bases ATGACTAGTAAAGCCAAGATTCCCGCCAAGACGGTGTCGGTGGATGTGGCCATTGTAGGGGCTGGCTTCGGCGGGCTGTG CATGGCGATCAAGCTGCGCGAAGCGGGCAATGAGGATTTCGTTATTTTGGAGAAGGCTGCGCAGGTGGGCGGTGCTTGGT ATTTCAATCGCTATCCGGGGGCCGCCTGCGATGTGCAGTCGCACTTGTATTCCTTTTCCTTCGCCGCCAAGGCGGATTGG ACCAAGCGTTATGCGCCTCGGGACGAAATTGAGAACTACATTCTCGATACCGTGGAGCAGTATCAGCTACGGCCCTTTAT CCAGTTTAACCAGGAAGTTAACGAAGCCCATTTTGATGAAACCACTGGCCGCTGGACGGTGCGCACCGCCGCGGGCATGA CCATTGATTGTCGCCACTTTGTGCTCGCCTCCGGTCCGTTACATGTGCCGAATGTGCCGAACATCAAGGGACTCAAGCGT TTCAAAGGCAAGGTGATGCATTCAGCCGAATGGGATCATGGTTATGACTTGGTGGGCAAGAAGGTGGTGTCCATCGGTAC GGGTGGCAGCGCCATTCAGTATTGCCCGGAAATTGCCCCCAAGGTGAAGAAGCTATCGGTGTTCCAGCGTAGCGCGGCGT GGGTTATTCCCCGTGATGAACGCGGTTACTGGGGTATTCAACGGCGGTTGTTCAAGCGCTTCCCGACCCTGCGCAAACTG CACCGGGCGCGCCTTTACTGGGGCAATGAGTCTCGGGTGGCGCCAGCCTCCAGCCCTAAAGCCGCACGGCTGCTGGGTGC CCTTTGTAAACAGTTCATCCGCCTGCAAGTGAAAGACAAGAGGCTGGCGAAGGCACTGACACCTGATTACACCTTCGGCT GCAAGCGGGTACTGATTTCCAACAAGTGGTTCCCCATGTTCAACCGTGACAATGTGGAGCTGGTTACTGCCGGTATCCGC GAGGTGAAAGCCAACAGTGTGGTGACGGAAGATGGGGTAGAGCATGACGCGGATTGTATTATTCTCGGCACAGGGTTTGT GGTGGATCCACGTATCTACATGAAAGACTTTCCGCTGACCGGTTTGCCGGGCCATGATCTGAATAAGGACTGGGCCGAAT CTGCTGAAGCACATTATGGTATTACCGTCAGTGGTTACCCGAACCTGTATATGCTGGTGGGGCCAAACACTGGCTTGGGC CATAATTCCATTCTGTTCATGATTGAGTGCCAGGTGAGATACGCCTTGCAATGCATGGCGCTGCTGCGAGAGGAGGGCGC GGATTATTTGGATGTGAAGCCCAAAGCGCAACAAGCTTTTAATGCCAACGTGCAGCGCCGCCTGCAAGGCACCACCTGGA CCTCCGGTTGTACCAGCTGGTATCAACAGGACGATGGTAAGAATTTCGCTCTGTGGCCGGGCTCCACGTTGCGCTACTGG CTGGAAACGCGCAACGTGCAGTCCACGGATTATGAGTTTGTGTGCGCGAATGCCGATGCCGAAGCCGAGGCGGAGGTAGA AGTAGAGGCCTGA
Upstream 100 bases:
>100_bases CATGATAACCGAGAATTTTTAAACCAGACCGAGGCGCTGATTGAGGAAGTCGCCGCCTTTCGCGTCAACCGGCTGAAAGC CGCCTGAGGAGGGCAGTGAC
Downstream 100 bases:
>100_bases GGGAGGCTTGCGTTAATGTGTGAACGAGGGGCAGCAACCTAAGCTGCCCCTTTTTTTGTGGATGGCTTTTGGGCATTGAG TTGCGCTGCGATAAAAGTAC
Product: monooxygenase flavin-binding family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 510; Mature: 509
Protein sequence:
>510_residues MTSKAKIPAKTVSVDVAIVGAGFGGLCMAIKLREAGNEDFVILEKAAQVGGAWYFNRYPGAACDVQSHLYSFSFAAKADW TKRYAPRDEIENYILDTVEQYQLRPFIQFNQEVNEAHFDETTGRWTVRTAAGMTIDCRHFVLASGPLHVPNVPNIKGLKR FKGKVMHSAEWDHGYDLVGKKVVSIGTGGSAIQYCPEIAPKVKKLSVFQRSAAWVIPRDERGYWGIQRRLFKRFPTLRKL HRARLYWGNESRVAPASSPKAARLLGALCKQFIRLQVKDKRLAKALTPDYTFGCKRVLISNKWFPMFNRDNVELVTAGIR EVKANSVVTEDGVEHDADCIILGTGFVVDPRIYMKDFPLTGLPGHDLNKDWAESAEAHYGITVSGYPNLYMLVGPNTGLG HNSILFMIECQVRYALQCMALLREEGADYLDVKPKAQQAFNANVQRRLQGTTWTSGCTSWYQQDDGKNFALWPGSTLRYW LETRNVQSTDYEFVCANADAEAEAEVEVEA
Sequences:
>Translated_510_residues MTSKAKIPAKTVSVDVAIVGAGFGGLCMAIKLREAGNEDFVILEKAAQVGGAWYFNRYPGAACDVQSHLYSFSFAAKADW TKRYAPRDEIENYILDTVEQYQLRPFIQFNQEVNEAHFDETTGRWTVRTAAGMTIDCRHFVLASGPLHVPNVPNIKGLKR FKGKVMHSAEWDHGYDLVGKKVVSIGTGGSAIQYCPEIAPKVKKLSVFQRSAAWVIPRDERGYWGIQRRLFKRFPTLRKL HRARLYWGNESRVAPASSPKAARLLGALCKQFIRLQVKDKRLAKALTPDYTFGCKRVLISNKWFPMFNRDNVELVTAGIR EVKANSVVTEDGVEHDADCIILGTGFVVDPRIYMKDFPLTGLPGHDLNKDWAESAEAHYGITVSGYPNLYMLVGPNTGLG HNSILFMIECQVRYALQCMALLREEGADYLDVKPKAQQAFNANVQRRLQGTTWTSGCTSWYQQDDGKNFALWPGSTLRYW LETRNVQSTDYEFVCANADAEAEAEVEVEA >Mature_509_residues TSKAKIPAKTVSVDVAIVGAGFGGLCMAIKLREAGNEDFVILEKAAQVGGAWYFNRYPGAACDVQSHLYSFSFAAKADWT KRYAPRDEIENYILDTVEQYQLRPFIQFNQEVNEAHFDETTGRWTVRTAAGMTIDCRHFVLASGPLHVPNVPNIKGLKRF KGKVMHSAEWDHGYDLVGKKVVSIGTGGSAIQYCPEIAPKVKKLSVFQRSAAWVIPRDERGYWGIQRRLFKRFPTLRKLH RARLYWGNESRVAPASSPKAARLLGALCKQFIRLQVKDKRLAKALTPDYTFGCKRVLISNKWFPMFNRDNVELVTAGIRE VKANSVVTEDGVEHDADCIILGTGFVVDPRIYMKDFPLTGLPGHDLNKDWAESAEAHYGITVSGYPNLYMLVGPNTGLGH NSILFMIECQVRYALQCMALLREEGADYLDVKPKAQQAFNANVQRRLQGTTWTSGCTSWYQQDDGKNFALWPGSTLRYWL ETRNVQSTDYEFVCANADAEAEAEVEVEA
Specific function: Unknown
COG id: COG2072
COG function: function code P; Predicted flavoprotein involved in K+ transport
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FAD-binding monooxygenase family [H]
Homologues:
Organism=Homo sapiens, GI50541965, Length=361, Percent_Identity=24.9307479224377, Blast_Score=78, Evalue=2e-14, Organism=Homo sapiens, GI50541961, Length=361, Percent_Identity=24.9307479224377, Blast_Score=78, Evalue=2e-14, Organism=Homo sapiens, GI4503757, Length=362, Percent_Identity=22.6519337016575, Blast_Score=70, Evalue=6e-12, Organism=Caenorhabditis elegans, GI25145785, Length=345, Percent_Identity=24.6376811594203, Blast_Score=87, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17555726, Length=455, Percent_Identity=23.956043956044, Blast_Score=78, Evalue=9e-15, Organism=Caenorhabditis elegans, GI25150462, Length=223, Percent_Identity=28.2511210762332, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI19922866, Length=214, Percent_Identity=25.7009345794392, Blast_Score=71, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020946 [H]
Pfam domain/function: PF00743 FMO-like [H]
EC number: NA
Molecular weight: Translated: 57293; Mature: 57162
Theoretical pI: Translated: 8.56; Mature: 8.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSKAKIPAKTVSVDVAIVGAGFGGLCMAIKLREAGNEDFVILEKAAQVGGAWYFNRYPG CCCCCCCCCEEEEEEEEEEECCCCCEEEEEEEECCCCCCEEEEEEHHHCCCEEEECCCCC AACDVQSHLYSFSFAAKADWTKRYAPRDEIENYILDTVEQYQLRPFIQFNQEVNEAHFDE CCHHHHHHHHHEEEECCCCHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHCCC TTGRWTVRTAAGMTIDCRHFVLASGPLHVPNVPNIKGLKRFKGKVMHSAEWDHGYDLVGK CCCCEEEEEECCCEEECEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHCC KVVSIGTGGSAIQYCPEIAPKVKKLSVFQRSAAWVIPRDERGYWGIQRRLFKRFPTLRKL EEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCHHHHHH HRARLYWGNESRVAPASSPKAARLLGALCKQFIRLQVKDKRLAKALTPDYTFGCKRVLIS HHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHEECCHHHHHHHCCCCCCCCCEEEEEC NKWFPMFNRDNVELVTAGIREVKANSVVTEDGVEHDADCIILGTGFVVDPRIYMKDFPLT CCCCCCCCCCCEEEEECCHHHHHCCCEEECCCCCCCCCEEEEECCEEECCEEEEECCCCC GLPGHDLNKDWAESAEAHYGITVSGYPNLYMLVGPNTGLGHNSILFMIECQVRYALQCMA CCCCCCCCCHHHHCCCCCCCEEEECCCCEEEEECCCCCCCCCCEEEEEEEHHHHHHHHHH LLREEGADYLDVKPKAQQAFNANVQRRLQGTTWTSGCTSWYQQDDGKNFALWPGSTLRYW HHHHCCCCEEECCCHHHHHHCCCHHHHHCCCCCCCHHHHHHHCCCCCEEEECCCCHHEEE LETRNVQSTDYEFVCANADAEAEAEVEVEA EECCCCCCCCCEEEEECCCCCCCCEEEEEC >Mature Secondary Structure TSKAKIPAKTVSVDVAIVGAGFGGLCMAIKLREAGNEDFVILEKAAQVGGAWYFNRYPG CCCCCCCCEEEEEEEEEEECCCCCEEEEEEEECCCCCCEEEEEEHHHCCCEEEECCCCC AACDVQSHLYSFSFAAKADWTKRYAPRDEIENYILDTVEQYQLRPFIQFNQEVNEAHFDE CCHHHHHHHHHEEEECCCCHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHCCC TTGRWTVRTAAGMTIDCRHFVLASGPLHVPNVPNIKGLKRFKGKVMHSAEWDHGYDLVGK CCCCEEEEEECCCEEECEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHCC KVVSIGTGGSAIQYCPEIAPKVKKLSVFQRSAAWVIPRDERGYWGIQRRLFKRFPTLRKL EEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCHHHHHH HRARLYWGNESRVAPASSPKAARLLGALCKQFIRLQVKDKRLAKALTPDYTFGCKRVLIS HHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHEECCHHHHHHHCCCCCCCCCEEEEEC NKWFPMFNRDNVELVTAGIREVKANSVVTEDGVEHDADCIILGTGFVVDPRIYMKDFPLT CCCCCCCCCCCEEEEECCHHHHHCCCEEECCCCCCCCCEEEEECCEEECCEEEEECCCCC GLPGHDLNKDWAESAEAHYGITVSGYPNLYMLVGPNTGLGHNSILFMIECQVRYALQCMA CCCCCCCCCHHHHCCCCCCCEEEECCCCEEEEECCCCCCCCCCEEEEEEEHHHHHHHHHH LLREEGADYLDVKPKAQQAFNANVQRRLQGTTWTSGCTSWYQQDDGKNFALWPGSTLRYW HHHHCCCCEEECCCHHHHHHCCCHHHHHCCCCCCCHHHHHHHCCCCCEEEECCCCHHEEE LETRNVQSTDYEFVCANADAEAEAEVEVEA EECCCCCCCCCEEEEECCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]