| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110833957
Identifier: 110833957
GI number: 110833957
Start: 1243755
End: 1244609
Strand: Direct
Name: 110833957
Synonym: ABO_1096
Alternate gene names: NA
Gene position: 1243755-1244609 (Clockwise)
Preceding gene: 110833956
Following gene: 110833958
Centisome position: 39.86
GC content: 56.84
Gene sequence:
>855_bases ATGATGACAATTCAGGTTGATCCGGTACGCCGGAATCTCAAATTCGGGCTGCCCGCCGGCAAGGCATTGAGCTGGAACCC CGGCGGGCTGCATGTTTCACAGTTCTATAACACCCTGTCGATTTTCTTTCCGGCGGGGGAGCGCTTCTTTATTCAGAGTG TGCGCAACTACGCTAAGGAAATCACTGATCCGAAACTGAAGGAGCAGATCTCGGCTTTTATCGGCCAGGAAGGCTTCCAC ACCCGCGAGCATGAGGAATACAACGACGCATTGCAGGCGGAAGGGATGCCTGTTGAGGCTCTGGATGCGCTGGTGGTGCG GTTGCTGGAGCTGGTGAAGAAGGCGCCGCGCTCGGTGCAGTTGGCGGCCACGGTGGCGCTGGAACACCTTACCGCAGTGC TGGGTGACATGGTGCTTCGTAACCCCGAATTGCTGGAAGGAGTGGACCCACATTATTCGGCGATCTGGCGTTGGCATGCC ATTGAGGAAACCGAACATAAAGCGGTCTGTTTCGATGCCTTCGAGCAAATGCTGGGCAGAGGCATCAAAGCCTATGGGTT ACGTGCTGGAGCGTTCTTGTTGGTTAATGCGCTGTTCTGGAGTCTCTACGTGCCCTTCTACACGATAATGGTGGCGAAGG GGGGCGGCCTGCTGAACCTGAACGGCTGGAGGAAGGTGGTCAACCTGACGTTGGGTCGGCCGGGGGTGCTGCGACGCTCT ATACCGGATTGGCTGGATTTCTTCCGCCCAGGCTTTCACCCCTGGATGCATGATAACCGAGAATTTTTAAACCAGACCGA GGCGCTGATTGAGGAAGTCGCCGCCTTTCGCGTCAACCGGCTGAAAGCCGCCTGA
Upstream 100 bases:
>100_bases GACCCATATCAATATACGGTTACATTGTTCAATGTAACCGTTGAGGGTGTCACCTTTGTGGCCTTAGCATCCGATTAATT CGATCTGCTTAAGGGGCAAG
Downstream 100 bases:
>100_bases GGAGGGCAGTGACATGACTAGTAAAGCCAAGATTCCCGCCAAGACGGTGTCGGTGGATGTGGCCATTGTAGGGGCTGGCT TCGGCGGGCTGTGCATGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Metal-Dependent Hydrolase-Like Protein; FF Domain-Containing Protein; Conserved Protein UCP; FF Domain Protein; Metal-Dependent Hydrolase-Like; Phthalate 4 5-Dioxygenase; Metal Hydrolase
Number of amino acids: Translated: 284; Mature: 284
Protein sequence:
>284_residues MMTIQVDPVRRNLKFGLPAGKALSWNPGGLHVSQFYNTLSIFFPAGERFFIQSVRNYAKEITDPKLKEQISAFIGQEGFH TREHEEYNDALQAEGMPVEALDALVVRLLELVKKAPRSVQLAATVALEHLTAVLGDMVLRNPELLEGVDPHYSAIWRWHA IEETEHKAVCFDAFEQMLGRGIKAYGLRAGAFLLVNALFWSLYVPFYTIMVAKGGGLLNLNGWRKVVNLTLGRPGVLRRS IPDWLDFFRPGFHPWMHDNREFLNQTEALIEEVAAFRVNRLKAA
Sequences:
>Translated_284_residues MMTIQVDPVRRNLKFGLPAGKALSWNPGGLHVSQFYNTLSIFFPAGERFFIQSVRNYAKEITDPKLKEQISAFIGQEGFH TREHEEYNDALQAEGMPVEALDALVVRLLELVKKAPRSVQLAATVALEHLTAVLGDMVLRNPELLEGVDPHYSAIWRWHA IEETEHKAVCFDAFEQMLGRGIKAYGLRAGAFLLVNALFWSLYVPFYTIMVAKGGGLLNLNGWRKVVNLTLGRPGVLRRS IPDWLDFFRPGFHPWMHDNREFLNQTEALIEEVAAFRVNRLKAA >Mature_284_residues MMTIQVDPVRRNLKFGLPAGKALSWNPGGLHVSQFYNTLSIFFPAGERFFIQSVRNYAKEITDPKLKEQISAFIGQEGFH TREHEEYNDALQAEGMPVEALDALVVRLLELVKKAPRSVQLAATVALEHLTAVLGDMVLRNPELLEGVDPHYSAIWRWHA IEETEHKAVCFDAFEQMLGRGIKAYGLRAGAFLLVNALFWSLYVPFYTIMVAKGGGLLNLNGWRKVVNLTLGRPGVLRRS IPDWLDFFRPGFHPWMHDNREFLNQTEALIEEVAAFRVNRLKAA
Specific function: Unknown
COG id: COG3687
COG function: function code R; Predicted metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32216; Mature: 32216
Theoretical pI: Translated: 7.85; Mature: 7.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMTIQVDPVRRNLKFGLPAGKALSWNPGGLHVSQFYNTLSIFFPAGERFFIQSVRNYAKE CCEEEECHHHHCCCCCCCCCCCCCCCCCCEEHHHHHHHHHEEECCCHHHHHHHHHHHHHH ITDPKLKEQISAFIGQEGFHTREHEEYNDALQAEGMPVEALDALVVRLLELVKKAPRSVQ CCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHH LAATVALEHLTAVLGDMVLRNPELLEGVDPHYSAIWRWHAIEETEHKAVCFDAFEQMLGR HHHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC GIKAYGLRAGAFLLVNALFWSLYVPFYTIMVAKGGGLLNLNGWRKVVNLTLGRPGVLRRS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHCCCCCHHHHC IPDWLDFFRPGFHPWMHDNREFLNQTEALIEEVAAFRVNRLKAA CHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MMTIQVDPVRRNLKFGLPAGKALSWNPGGLHVSQFYNTLSIFFPAGERFFIQSVRNYAKE CCEEEECHHHHCCCCCCCCCCCCCCCCCCEEHHHHHHHHHEEECCCHHHHHHHHHHHHHH ITDPKLKEQISAFIGQEGFHTREHEEYNDALQAEGMPVEALDALVVRLLELVKKAPRSVQ CCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHH LAATVALEHLTAVLGDMVLRNPELLEGVDPHYSAIWRWHAIEETEHKAVCFDAFEQMLGR HHHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC GIKAYGLRAGAFLLVNALFWSLYVPFYTIMVAKGGGLLNLNGWRKVVNLTLGRPGVLRRS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHCCCCCHHHHC IPDWLDFFRPGFHPWMHDNREFLNQTEALIEEVAAFRVNRLKAA CHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA