Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is yhcX [H]

Identifier: 110833956

GI number: 110833956

Start: 1240954

End: 1242486

Strand: Direct

Name: yhcX [H]

Synonym: ABO_1095

Alternate gene names: 110833956

Gene position: 1240954-1242486 (Clockwise)

Preceding gene: 110833955

Following gene: 110833957

Centisome position: 39.77

GC content: 55.06

Gene sequence:

>1533_bases
ATGGCAGAAGAAACCACTCGGTTACGTTTGCGAACGCTGACGCACGAGGATTATCCCGCGTTGGCGCGCCTGATGAATCA
GGTGTATCACGATATTGGTGGCGCCTGGCCAGAAGACACCATCAAAACCCTGATCCGCATTTTTCAAGACGGGCAGCTGG
TGATTGAAGACAACGGCGAACTGGTGGCCACGGCACTGACTATCAAAGTTAAATACGACCGGTTCTCCAACCCGCATCGC
TACGAAGACCTGATTACCGACGACAAAGTGCGCTCCCACGACAACAAGGGCGATGCGCTTTACGGCCTAGATGTATTTGT
AGACAAGGAATACCGCGGCTATCGCCTGGGCCGCCGCTTGTACGAAGCTCGCAAAGAATTGTGCCGGGAAGAGAATCTAC
GTGCGATTTTGGCGGGTGGTCGCCTGCCGGGGTATACCAACTACGCTGACCAGATGCCGGTGACCGAATACATCGAGCAG
GTAGAAGCCCGCGCCATCTACGATCCTATCTTGTCATTTCAGCTTTCCAACGGCTTCGACGTGAAACGTCTTATGAAGGC
GTATCTGCCGGAAGATGAAGATTCTCACGGCTATGCCACGCTGTTGGAATGGGACAACATTCTCTACGAACCGGAAGACG
ACGACGCCGAATGGCCACGCCGCACCGTGGTTCGTGTGGGCGTAGTGCAGCGTCGTATGCGTGCTGCCCGCGACGTGCAA
GATCTGCTCAATCAGGTGGAGTTTTTTATTGATGCGCTATCCGATTACCGCGCCGACTTTGCCGTGCTGCCGGAATTCTT
TAGCGCGCCGCTCATGGGGCTACGGCCAGAATTGAACTCCGTGGAAGCGGTGCGCTTCCTCGCCAGCTTCACCGAAGAAG
TACGCGATGCCTTGGCGGATATGGCCGTGAGCTACAACATCAACATCATTGGCGGCTCCATGCCGGTGATTGAAGATGAC
AAGGTCTACAATGTGGCCTACTTGATGCGTCGCGATGGCTCGGTGGAATCCCAGTACAAGATTCACATTACCCCCCACGA
ACGCCGTGACTGGGTGATCCAGGGCGGTGACAAATTGCAGGTGTTCGATACCGACGCAGGTAGGGTGGGTATCCTGATTT
GTTACGACGTGGAATTCCCTGAGCTGGGCCGGATTCTCGCCGACGAGAAAATGGACATCCTGTTCGTGCCGTTCTGGACC
GACACCAAAAACGGCTACCTGCGCGTACGTCACTGTGCCCAGGCCCGCGCCATCGAAAACGAATGCTACGTGGCCATTTC
CGGCTCGGTGGGCAACCTGCCCCGGGTGGATGCGGTGGATATCCAGTACGCACAATCGTCGGTATTTTCCCCCAGCGATT
TCTACTTTCCCCACGATGCCATCATCAGTGAATCGGTCCCCAATACCGAAATGCTGATGTTTGCCGATGTGGATCTGGAA
AAACTGAAGCTGCTGCACCGGGAAGGCTCGGTAACCAACCTGCGCGATCGTCGGGATGATCTTTATAGCTTGGATTGGAA
AAAGAAAGACTAA

Upstream 100 bases:

>100_bases
CCGTAGACTAGCCTGCTGAAACGGGGATGCGGTGGTGAAGGCAGTAGCGTTTTTTCGCGTTGCGCCGTGGTGCGTGAAGC
GTCAACACAAGGAGTTATTC

Downstream 100 bases:

>100_bases
ACCCTCAGGGCAGGGCCGCCCGGCCCTGCCTGCACTTCCCGGTCAGAAGTATGCTGTAGGAACGTAGCGTAGCGAACTAA
CGCACGTAGTGCGGCCCGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 510; Mature: 509

Protein sequence:

>510_residues
MAEETTRLRLRTLTHEDYPALARLMNQVYHDIGGAWPEDTIKTLIRIFQDGQLVIEDNGELVATALTIKVKYDRFSNPHR
YEDLITDDKVRSHDNKGDALYGLDVFVDKEYRGYRLGRRLYEARKELCREENLRAILAGGRLPGYTNYADQMPVTEYIEQ
VEARAIYDPILSFQLSNGFDVKRLMKAYLPEDEDSHGYATLLEWDNILYEPEDDDAEWPRRTVVRVGVVQRRMRAARDVQ
DLLNQVEFFIDALSDYRADFAVLPEFFSAPLMGLRPELNSVEAVRFLASFTEEVRDALADMAVSYNINIIGGSMPVIEDD
KVYNVAYLMRRDGSVESQYKIHITPHERRDWVIQGGDKLQVFDTDAGRVGILICYDVEFPELGRILADEKMDILFVPFWT
DTKNGYLRVRHCAQARAIENECYVAISGSVGNLPRVDAVDIQYAQSSVFSPSDFYFPHDAIISESVPNTEMLMFADVDLE
KLKLLHREGSVTNLRDRRDDLYSLDWKKKD

Sequences:

>Translated_510_residues
MAEETTRLRLRTLTHEDYPALARLMNQVYHDIGGAWPEDTIKTLIRIFQDGQLVIEDNGELVATALTIKVKYDRFSNPHR
YEDLITDDKVRSHDNKGDALYGLDVFVDKEYRGYRLGRRLYEARKELCREENLRAILAGGRLPGYTNYADQMPVTEYIEQ
VEARAIYDPILSFQLSNGFDVKRLMKAYLPEDEDSHGYATLLEWDNILYEPEDDDAEWPRRTVVRVGVVQRRMRAARDVQ
DLLNQVEFFIDALSDYRADFAVLPEFFSAPLMGLRPELNSVEAVRFLASFTEEVRDALADMAVSYNINIIGGSMPVIEDD
KVYNVAYLMRRDGSVESQYKIHITPHERRDWVIQGGDKLQVFDTDAGRVGILICYDVEFPELGRILADEKMDILFVPFWT
DTKNGYLRVRHCAQARAIENECYVAISGSVGNLPRVDAVDIQYAQSSVFSPSDFYFPHDAIISESVPNTEMLMFADVDLE
KLKLLHREGSVTNLRDRRDDLYSLDWKKKD
>Mature_509_residues
AEETTRLRLRTLTHEDYPALARLMNQVYHDIGGAWPEDTIKTLIRIFQDGQLVIEDNGELVATALTIKVKYDRFSNPHRY
EDLITDDKVRSHDNKGDALYGLDVFVDKEYRGYRLGRRLYEARKELCREENLRAILAGGRLPGYTNYADQMPVTEYIEQV
EARAIYDPILSFQLSNGFDVKRLMKAYLPEDEDSHGYATLLEWDNILYEPEDDDAEWPRRTVVRVGVVQRRMRAARDVQD
LLNQVEFFIDALSDYRADFAVLPEFFSAPLMGLRPELNSVEAVRFLASFTEEVRDALADMAVSYNINIIGGSMPVIEDDK
VYNVAYLMRRDGSVESQYKIHITPHERRDWVIQGGDKLQVFDTDAGRVGILICYDVEFPELGRILADEKMDILFVPFWTD
TKNGYLRVRHCAQARAIENECYVAISGSVGNLPRVDAVDIQYAQSSVFSPSDFYFPHDAIISESVPNTEMLMFADVDLEK
LKLLHREGSVTNLRDRRDDLYSLDWKKKD

Specific function: Unknown

COG id: COG0388

COG function: function code R; Predicted amidohydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 N-acetyltransferase domain [H]

Homologues:

Organism=Homo sapiens, GI9910460, Length=303, Percent_Identity=25.7425742574257, Blast_Score=97, Evalue=4e-20,
Organism=Caenorhabditis elegans, GI17556280, Length=305, Percent_Identity=25.5737704918033, Blast_Score=72, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6323383, Length=304, Percent_Identity=25.3289473684211, Blast_Score=82, Evalue=2e-16,
Organism=Saccharomyces cerevisiae, GI6322335, Length=307, Percent_Identity=27.0358306188925, Blast_Score=80, Evalue=9e-16,
Organism=Drosophila melanogaster, GI21355835, Length=302, Percent_Identity=21.523178807947, Blast_Score=85, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000182
- InterPro:   IPR016181
- InterPro:   IPR003010
- InterPro:   IPR001110 [H]

Pfam domain/function: PF00583 Acetyltransf_1; PF00795 CN_hydrolase [H]

EC number: NA

Molecular weight: Translated: 58826; Mature: 58695

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: PS00527 RIBOSOMAL_S14 ; PS50263 CN_HYDROLASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEETTRLRLRTLTHEDYPALARLMNQVYHDIGGAWPEDTIKTLIRIFQDGQLVIEDNGE
CCCCHHEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCC
LVATALTIKVKYDRFSNPHRYEDLITDDKVRSHDNKGDALYGLDVFVDKEYRGYRLGRRL
EEEEEEEEEEEECCCCCCCHHHHHCCCCHHHCCCCCCCEEEEEEEEECCCCHHHHHHHHH
YEARKELCREENLRAILAGGRLPGYTNYADQMPVTEYIEQVEARAIYDPILSFQLSNGFD
HHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCC
VKRLMKAYLPEDEDSHGYATLLEWDNILYEPEDDDAEWPRRTVVRVGVVQRRMRAARDVQ
HHHHHHHHCCCCCCCCCEEEEEECCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
DLLNQVEFFIDALSDYRADFAVLPEFFSAPLMGLRPELNSVEAVRFLASFTEEVRDALAD
HHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
MAVSYNINIIGGSMPVIEDDKVYNVAYLMRRDGSVESQYKIHITPHERRDWVIQGGDKLQ
HEEEEEEEEEECCCCCCCCCCEEEEEEEEECCCCCCCEEEEEECCCCCCCEEEECCCEEE
VFDTDAGRVGILICYDVEFPELGRILADEKMDILFVPFWTDTKNGYLRVRHCAQARAIEN
EEECCCCCEEEEEEEECCCHHHHHHHHCCCCCEEEEEEEECCCCCEEEEEHHHHHHHCCC
ECYVAISGSVGNLPRVDAVDIQYAQSSVFSPSDFYFPHDAIISESVPNTEMLMFADVDLE
CEEEEEECCCCCCCCCCEEEHHHHHHCCCCCCCCCCCCHHHHHCCCCCCEEEEEECCCHH
KLKLLHREGSVTNLRDRRDDLYSLDWKKKD
HHHHHHHCCCCCCHHHHCCCCEECCCCCCC
>Mature Secondary Structure 
AEETTRLRLRTLTHEDYPALARLMNQVYHDIGGAWPEDTIKTLIRIFQDGQLVIEDNGE
CCCHHEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCC
LVATALTIKVKYDRFSNPHRYEDLITDDKVRSHDNKGDALYGLDVFVDKEYRGYRLGRRL
EEEEEEEEEEEECCCCCCCHHHHHCCCCHHHCCCCCCCEEEEEEEEECCCCHHHHHHHHH
YEARKELCREENLRAILAGGRLPGYTNYADQMPVTEYIEQVEARAIYDPILSFQLSNGFD
HHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCC
VKRLMKAYLPEDEDSHGYATLLEWDNILYEPEDDDAEWPRRTVVRVGVVQRRMRAARDVQ
HHHHHHHHCCCCCCCCCEEEEEECCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
DLLNQVEFFIDALSDYRADFAVLPEFFSAPLMGLRPELNSVEAVRFLASFTEEVRDALAD
HHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
MAVSYNINIIGGSMPVIEDDKVYNVAYLMRRDGSVESQYKIHITPHERRDWVIQGGDKLQ
HEEEEEEEEEECCCCCCCCCCEEEEEEEEECCCCCCCEEEEEECCCCCCCEEEECCCEEE
VFDTDAGRVGILICYDVEFPELGRILADEKMDILFVPFWTDTKNGYLRVRHCAQARAIEN
EEECCCCCEEEEEEEECCCHHHHHHHHCCCCCEEEEEEEECCCCCEEEEEHHHHHHHCCC
ECYVAISGSVGNLPRVDAVDIQYAQSSVFSPSDFYFPHDAIISESVPNTEMLMFADVDLE
CEEEEEECCCCCCCCCCEEEHHHHHHCCCCCCCCCCCCHHHHHCCCCCCEEEEEECCCHH
KLKLLHREGSVTNLRDRRDDLYSLDWKKKD
HHHHHHHCCCCCCHHHHCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969498; 9384377 [H]