Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is 110833860

Identifier: 110833860

GI number: 110833860

Start: 1133895

End: 1135913

Strand: Direct

Name: 110833860

Synonym: ABO_0999

Alternate gene names: NA

Gene position: 1133895-1135913 (Clockwise)

Preceding gene: 110833859

Following gene: 110833861

Centisome position: 36.34

GC content: 51.02

Gene sequence:

>2019_bases
ATGAATAATAATCACCTGTGTAGAAGCAGGCTGGCGATGGCTGTTGCCAGTATCACCGCCCTTACCGGGCTTTCCCTCCC
CGCTTCAGCGGTTCAACTAGATTTCGAGAACCCGGACTGGTCGGGCCGGCTGGATACAACCTTGTCTGTGGGTGCCCTGT
TTCGAACCGAGAGCCAGGATTCTATGTTGGCGGCCACCGGTGACGTGGTCGATATGGCTACGAAAGGTTATGGGTCCCAA
ATCAATAAGAACGATGCCAACAACAATTACGATACCGGTTTGGCGTCGTTGGTGTACAAAATTACCCCAGAGCTGGATCT
GAGCTGGAAGGGGAAATATGGCATGTTTCTCCGCGGCACCGCATTTTATGATCAGGTGATCATGGGCGGTGGGCATGATG
GTGGGCAGTTGATTAAGGCTGCTGGCTACCCTGGCGCCATGGGTTTTACCCGTTACGCCACGTATTCTGATTACGCGAAT
AATGGCACCGGTGATGATTTCAGCGGTGACGCTGAACGATACGCCGGCCAGCGTGCTCGTCTTTTAGATGCGTATGTGTG
GGGGAACTTCGATATGTTCGAGCGCCCATTGAATGTTCGCCTTGGGCAGCAGGTGATCAACTGGGGTGAAGCCTTGTTTA
TGCAGAATGGGGTGAATACGGCGAACTACTTTGATTTGAATGCCTTGCGCCTGCCGGGCTCCGAAATTAAGGAAGCCTTG
CTGCCGCTGGATAGCGTCTACTTCTCTTATGGCCTGACCTTTAATGCAACCGTGGAAGCTTTTTACCAGTTTGAATGGAA
AAACTCTGAGGATGCGCCCTCGGGTACTTACTTCTCTACCCATGATGGCTTCCCGGGTAAAGGGGCAGACAATGTCATCG
TCGATGGTCGAGTTGTTGCGCTGAGCGCTGTTCAGGCGGGTGCAATTCCTTCGCCGGGGCTCCTTGAGCCTGGTTTTGCG
AATTATACCGCGTCTAATTACGGTTCTGGTTATCAGTATGAAGCGACTCAGGTAACAGTAAATCGAATTCGCGATAAAGA
GGCTAGCGATAGTGGTCAGTTTGGTTTGGCGTACCGTTACTTCGCAGAAGGGCTAAACGGTACTGAGTTTGCGCTTTATT
ATACGCGAACCCATGCTCGTACCCCCGTCGTTGGTTCTAGCCTGAATAACCTCGAAAACGGCAAGGGTGGTGGCGTTACA
GAAATGGCTAGAACCATTGATACCGCTGAGTATCAGATGGCCTATGTAGAAGACCAAGACATGTTCGGCGCAAGTTTTAA
TACCAGTGTCGGTAATATGTCACTTGCTGGGGAGCTGGCGTATAGGCCTAAACGTGCCATTATTAACGAAGGGGGTGATA
ACCTGATATCTGCTCTTGCTGGTGTTGCGGGTCAATCCGCTTTGCAGGGTCAGGATGTGGCTATCGGTGATTTGACAGGG
CATTGTGTTCGCGCGGAAATGGGGGGCTCCTGCTTGTCTGCGGACACGTTAGTACAAGATGGCCATCTCTACTATTTCTA
CGATGAGGTAGAAAGTTACAACGGTTCTTTAGTCAGTATCTTCAATTTCGGCCCGACGTTTGGCGCTGATGGCCTGATTG
CATTGCTGGAATTGGGCGTCGAACACATTGAAGGGCTTGAAAATCCTGACCTGGAATACAACTCTACGGCGGCAATTCTA
GATTCTGAAGCGCAAATTCTCAGCCCTGATGACCCGAACAGGTATTACATGGACCCCACCTCCTGGGGCTACCGTGCGGT
GCTGAAAGCGGATTACAGCAATGTCTTTGCTGGTGTTTCCATGAGCCCGAGTGTGCGTTTTGCTCATGATGTAAATGGTA
ACTCTCCGATTGGCGGCAACTTTATGGAAGACCGTAAGGCTGCGACACTGGGGGTGAGTTTTCTGTACTTGAATAACCTA
AAAGTGGCCATGTCTGCTACCACGTTCTGGGGCGCCAAATACTCCAACAAACTGGCCGACCGGAACAACGCGTCCGTTTC
TGTTAAGTACTCTTTCTAA

Upstream 100 bases:

>100_bases
GCGGCAGGTCGGGAAGAATAATGAGACCTGTCGCAAATGGGAGCGACTGTTGACCGGGTAAGAACAATAAAGCCATGCGC
ATGGCAATTCGGAGAACTAC

Downstream 100 bases:

>100_bases
TATGTTCCAGGTCGGAGTGCCGGCCTGTTGTTAACGGAGAGCAATCATGTTGAAGAAACTGACCGCAATGGGCGGTGCTT
TGGCTCTGTCCTTGAGTGTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 672; Mature: 672

Protein sequence:

>672_residues
MNNNHLCRSRLAMAVASITALTGLSLPASAVQLDFENPDWSGRLDTTLSVGALFRTESQDSMLAATGDVVDMATKGYGSQ
INKNDANNNYDTGLASLVYKITPELDLSWKGKYGMFLRGTAFYDQVIMGGGHDGGQLIKAAGYPGAMGFTRYATYSDYAN
NGTGDDFSGDAERYAGQRARLLDAYVWGNFDMFERPLNVRLGQQVINWGEALFMQNGVNTANYFDLNALRLPGSEIKEAL
LPLDSVYFSYGLTFNATVEAFYQFEWKNSEDAPSGTYFSTHDGFPGKGADNVIVDGRVVALSAVQAGAIPSPGLLEPGFA
NYTASNYGSGYQYEATQVTVNRIRDKEASDSGQFGLAYRYFAEGLNGTEFALYYTRTHARTPVVGSSLNNLENGKGGGVT
EMARTIDTAEYQMAYVEDQDMFGASFNTSVGNMSLAGELAYRPKRAIINEGGDNLISALAGVAGQSALQGQDVAIGDLTG
HCVRAEMGGSCLSADTLVQDGHLYYFYDEVESYNGSLVSIFNFGPTFGADGLIALLELGVEHIEGLENPDLEYNSTAAIL
DSEAQILSPDDPNRYYMDPTSWGYRAVLKADYSNVFAGVSMSPSVRFAHDVNGNSPIGGNFMEDRKAATLGVSFLYLNNL
KVAMSATTFWGAKYSNKLADRNNASVSVKYSF

Sequences:

>Translated_672_residues
MNNNHLCRSRLAMAVASITALTGLSLPASAVQLDFENPDWSGRLDTTLSVGALFRTESQDSMLAATGDVVDMATKGYGSQ
INKNDANNNYDTGLASLVYKITPELDLSWKGKYGMFLRGTAFYDQVIMGGGHDGGQLIKAAGYPGAMGFTRYATYSDYAN
NGTGDDFSGDAERYAGQRARLLDAYVWGNFDMFERPLNVRLGQQVINWGEALFMQNGVNTANYFDLNALRLPGSEIKEAL
LPLDSVYFSYGLTFNATVEAFYQFEWKNSEDAPSGTYFSTHDGFPGKGADNVIVDGRVVALSAVQAGAIPSPGLLEPGFA
NYTASNYGSGYQYEATQVTVNRIRDKEASDSGQFGLAYRYFAEGLNGTEFALYYTRTHARTPVVGSSLNNLENGKGGGVT
EMARTIDTAEYQMAYVEDQDMFGASFNTSVGNMSLAGELAYRPKRAIINEGGDNLISALAGVAGQSALQGQDVAIGDLTG
HCVRAEMGGSCLSADTLVQDGHLYYFYDEVESYNGSLVSIFNFGPTFGADGLIALLELGVEHIEGLENPDLEYNSTAAIL
DSEAQILSPDDPNRYYMDPTSWGYRAVLKADYSNVFAGVSMSPSVRFAHDVNGNSPIGGNFMEDRKAATLGVSFLYLNNL
KVAMSATTFWGAKYSNKLADRNNASVSVKYSF
>Mature_672_residues
MNNNHLCRSRLAMAVASITALTGLSLPASAVQLDFENPDWSGRLDTTLSVGALFRTESQDSMLAATGDVVDMATKGYGSQ
INKNDANNNYDTGLASLVYKITPELDLSWKGKYGMFLRGTAFYDQVIMGGGHDGGQLIKAAGYPGAMGFTRYATYSDYAN
NGTGDDFSGDAERYAGQRARLLDAYVWGNFDMFERPLNVRLGQQVINWGEALFMQNGVNTANYFDLNALRLPGSEIKEAL
LPLDSVYFSYGLTFNATVEAFYQFEWKNSEDAPSGTYFSTHDGFPGKGADNVIVDGRVVALSAVQAGAIPSPGLLEPGFA
NYTASNYGSGYQYEATQVTVNRIRDKEASDSGQFGLAYRYFAEGLNGTEFALYYTRTHARTPVVGSSLNNLENGKGGGVT
EMARTIDTAEYQMAYVEDQDMFGASFNTSVGNMSLAGELAYRPKRAIINEGGDNLISALAGVAGQSALQGQDVAIGDLTG
HCVRAEMGGSCLSADTLVQDGHLYYFYDEVESYNGSLVSIFNFGPTFGADGLIALLELGVEHIEGLENPDLEYNSTAAIL
DSEAQILSPDDPNRYYMDPTSWGYRAVLKADYSNVFAGVSMSPSVRFAHDVNGNSPIGGNFMEDRKAATLGVSFLYLNNL
KVAMSATTFWGAKYSNKLADRNNASVSVKYSF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 72644; Mature: 72644

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNNHLCRSRLAMAVASITALTGLSLPASAVQLDFENPDWSGRLDTTLSVGALFRTESQD
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEEECCCCC
SMLAATGDVVDMATKGYGSQINKNDANNNYDTGLASLVYKITPELDLSWKGKYGMFLRGT
CEEEECCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHEEECCCCCEEECCCCCEEEECH
AFYDQVIMGGGHDGGQLIKAAGYPGAMGFTRYATYSDYANNGTGDDFSGDAERYAGQRAR
HHHHHHHCCCCCCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHCCCHHH
LLDAYVWGNFDMFERPLNVRLGQQVINWGEALFMQNGVNTANYFDLNALRLPGSEIKEAL
EEEEEEECCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECEEEECCCHHHHHHH
LPLDSVYFSYGLTFNATVEAFYQFEWKNSEDAPSGTYFSTHDGFPGKGADNVIVDGRVVA
CCHHHHHHHHCCEEEEEEEEEEEEEECCCCCCCCCCEEECCCCCCCCCCCCEEECCEEEE
LSAVQAGAIPSPGLLEPGFANYTASNYGSGYQYEATQVTVNRIRDKEASDSGQFGLAYRY
EEEHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHEEEHHHHHCCCCCCCCCCCEEHHH
FAEGLNGTEFALYYTRTHARTPVVGSSLNNLENGKGGGVTEMARTIDTAEYQMAYVEDQD
HHCCCCCCEEEEEEEECCCCCCCCCCCHHCCCCCCCCCHHHHHHHHCCCCEEEEEEECCC
MFGASFNTSVGNMSLAGELAYRPKRAIINEGGDNLISALAGVAGQSALQGQDVAIGDLTG
CCCCCCCCCCCCEEECCHHHCCCCHHHHCCCCHHHHHHHHHHCCCHHCCCCCEEEECCCC
HCVRAEMGGSCLSADTLVQDGHLYYFYDEVESYNGSLVSIFNFGPTFGADGLIALLELGV
EEEEECCCCCEECCCCEEECCCEEEEEEEHHCCCCCEEEEEECCCCCCCCHHHHHHHHHH
EHIEGLENPDLEYNSTAAILDSEAQILSPDDPNRYYMDPTSWGYRAVLKADYSNVFAGVS
HHHCCCCCCCCCCCCEEEEEECCCEEECCCCCCCEEECCCCCCEEEEEEECCHHHEECCC
MSPSVRFAHDVNGNSPIGGNFMEDRKAATLGVSFLYLNNLKVAMSATTFWGAKYSNKLAD
CCCCEEEEEECCCCCCCCCCCHHCCHHHHHEEEEEEECCEEEEEEEEEECCCHHHCHHCC
RNNASVSVKYSF
CCCCEEEEEECC
>Mature Secondary Structure
MNNNHLCRSRLAMAVASITALTGLSLPASAVQLDFENPDWSGRLDTTLSVGALFRTESQD
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEEECCCCC
SMLAATGDVVDMATKGYGSQINKNDANNNYDTGLASLVYKITPELDLSWKGKYGMFLRGT
CEEEECCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHEEECCCCCEEECCCCCEEEECH
AFYDQVIMGGGHDGGQLIKAAGYPGAMGFTRYATYSDYANNGTGDDFSGDAERYAGQRAR
HHHHHHHCCCCCCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHCCCHHH
LLDAYVWGNFDMFERPLNVRLGQQVINWGEALFMQNGVNTANYFDLNALRLPGSEIKEAL
EEEEEEECCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECEEEECCCHHHHHHH
LPLDSVYFSYGLTFNATVEAFYQFEWKNSEDAPSGTYFSTHDGFPGKGADNVIVDGRVVA
CCHHHHHHHHCCEEEEEEEEEEEEEECCCCCCCCCCEEECCCCCCCCCCCCEEECCEEEE
LSAVQAGAIPSPGLLEPGFANYTASNYGSGYQYEATQVTVNRIRDKEASDSGQFGLAYRY
EEEHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHEEEHHHHHCCCCCCCCCCCEEHHH
FAEGLNGTEFALYYTRTHARTPVVGSSLNNLENGKGGGVTEMARTIDTAEYQMAYVEDQD
HHCCCCCCEEEEEEEECCCCCCCCCCCHHCCCCCCCCCHHHHHHHHCCCCEEEEEEECCC
MFGASFNTSVGNMSLAGELAYRPKRAIINEGGDNLISALAGVAGQSALQGQDVAIGDLTG
CCCCCCCCCCCCEEECCHHHCCCCHHHHCCCCHHHHHHHHHHCCCHHCCCCCEEEECCCC
HCVRAEMGGSCLSADTLVQDGHLYYFYDEVESYNGSLVSIFNFGPTFGADGLIALLELGV
EEEEECCCCCEECCCCEEECCCEEEEEEEHHCCCCCEEEEEECCCCCCCCHHHHHHHHHH
EHIEGLENPDLEYNSTAAILDSEAQILSPDDPNRYYMDPTSWGYRAVLKADYSNVFAGVS
HHHCCCCCCCCCCCCEEEEEECCCEEECCCCCCCEEECCCCCCEEEEEEECCHHHEECCC
MSPSVRFAHDVNGNSPIGGNFMEDRKAATLGVSFLYLNNLKVAMSATTFWGAKYSNKLAD
CCCCEEEEEECCCCCCCCCCCHHCCHHHHHEEEEEEECCEEEEEEEEEECCCHHHCHHCC
RNNASVSVKYSF
CCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA