Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is zipA [H]

Identifier: 110833809

GI number: 110833809

Start: 1066643

End: 1067563

Strand: Direct

Name: zipA [H]

Synonym: ABO_0948

Alternate gene names: 110833809

Gene position: 1066643-1067563 (Clockwise)

Preceding gene: 110833808

Following gene: 110833810

Centisome position: 34.19

GC content: 57.87

Gene sequence:

>921_bases
ATGGGCCTGAACTTAGAAACATTGATTGGCATTCTGGTTATTTTGATCCTGCTGATTCTCGTCGACGGTATGCGGCGGAT
GATCAGAGAGCGGCATGGGCGCCTGCGTATGCGCATTGACCCCCGTTACCGTGACCAACCGGAAGAAGAGGAAGACCGCG
GCCATAACCCAGAGCTAATCGGCTCTGCTCGCGTGATCCGTCGTGCTATGGAAGAGGATCAAAAGGAACGCCCACCCATG
GTAATGGAGCCGGATGAAGCGGCCGCAGATACCCGTACGGCTGAACAGCAAAGCCTGTTCGAAGCCGAGCAAGGATCGGC
GCCTCAACCGGGGGGGGCGCCCGAGCCCCAGCCAGAGGTTGCCCCGGCCCCTAACCCGTCGGCAGTAGAGCGACAGCCAG
AATCGACTCCCGAACCTCGTGAGGCGCCTCGCCAAGAGCCACGGATAGAGCCTAAGGCCGCACCGAAAACGCCCCGCGAG
CCTCAGCCCGTGCTGGAAGTGATCGTGGTACACCTGATTGCCCACCGTGGTGCGCCTTTTGACGGTGGCGCTTTACTGCG
CATGCTGTTGGAAGCGGGGTTGCGTTATGGTCGCATGAATATTTTCCATCGCCATGTAAGTGTGAACGGTGCCGATGATT
TGCAATTTTCCATGGCCAATGCGGTTGAGCCCGGCACTTTTGATTTGGATACCATGGAGAGCAAGACGTTTGCCGGGGTG
ACATTCTTCCTGAAACTGCCGGGGCCTACTGATGCCAGGAGCGCATTGGACAAGATGCTGTCTATTTGCCAACGGCTGGC
TTCGGAACTGGATGGTGAACTCAAAGATGAACAGCACAGCGTATTGACCCCGCAGACCATGGAACACCTACGTCAGCGCG
TGCAAGAATTCGAACGGCGCCAACGGGTGCCGAGCGTGTAA

Upstream 100 bases:

>100_bases
GTATCAGTGGATGTGGAAGAAGCGGCCGAAATGGCGGCAATGTGAGGAGTCGGTGCCGTTGTAATAGCGGTGCTTCAGCA
CAAGCAAGGAAGAAGAGGCG

Downstream 100 bases:

>100_bases
AAGCAGTTGAACGTTTAACGTTGAAAAGCAAAAGCCAAGCCCTATCTTGGCGCTTTAGGGGGCGTGCAGCGTAGATTGTC
GGATCTCAATGGTACTTGTA

Product: cell division protein ZipA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 305

Protein sequence:

>306_residues
MGLNLETLIGILVILILLILVDGMRRMIRERHGRLRMRIDPRYRDQPEEEEDRGHNPELIGSARVIRRAMEEDQKERPPM
VMEPDEAAADTRTAEQQSLFEAEQGSAPQPGGAPEPQPEVAPAPNPSAVERQPESTPEPREAPRQEPRIEPKAAPKTPRE
PQPVLEVIVVHLIAHRGAPFDGGALLRMLLEAGLRYGRMNIFHRHVSVNGADDLQFSMANAVEPGTFDLDTMESKTFAGV
TFFLKLPGPTDARSALDKMLSICQRLASELDGELKDEQHSVLTPQTMEHLRQRVQEFERRQRVPSV

Sequences:

>Translated_306_residues
MGLNLETLIGILVILILLILVDGMRRMIRERHGRLRMRIDPRYRDQPEEEEDRGHNPELIGSARVIRRAMEEDQKERPPM
VMEPDEAAADTRTAEQQSLFEAEQGSAPQPGGAPEPQPEVAPAPNPSAVERQPESTPEPREAPRQEPRIEPKAAPKTPRE
PQPVLEVIVVHLIAHRGAPFDGGALLRMLLEAGLRYGRMNIFHRHVSVNGADDLQFSMANAVEPGTFDLDTMESKTFAGV
TFFLKLPGPTDARSALDKMLSICQRLASELDGELKDEQHSVLTPQTMEHLRQRVQEFERRQRVPSV
>Mature_305_residues
GLNLETLIGILVILILLILVDGMRRMIRERHGRLRMRIDPRYRDQPEEEEDRGHNPELIGSARVIRRAMEEDQKERPPMV
MEPDEAAADTRTAEQQSLFEAEQGSAPQPGGAPEPQPEVAPAPNPSAVERQPESTPEPREAPRQEPRIEPKAAPKTPREP
QPVLEVIVVHLIAHRGAPFDGGALLRMLLEAGLRYGRMNIFHRHVSVNGADDLQFSMANAVEPGTFDLDTMESKTFAGVT
FFLKLPGPTDARSALDKMLSICQRLASELDGELKDEQHSVLTPQTMEHLRQRVQEFERRQRVPSV

Specific function: Interacts directly with the cell division protein FtsZ. Probable receptor for the septal ring structure, may anchor it to the inner-membrane [H]

COG id: COG3115

COG function: function code D; Cell division protein

Gene ontology:

Cell location: Cell inner membrane; Single-pass type I membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ZipA family [H]

Homologues:

Organism=Escherichia coli, GI1788752, Length=189, Percent_Identity=37.037037037037, Blast_Score=112, Evalue=3e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011919
- InterPro:   IPR007449
- ProDom:   PD035754 [H]

Pfam domain/function: PF04354 ZipA_C [H]

EC number: NA

Molecular weight: Translated: 34406; Mature: 34275

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLNLETLIGILVILILLILVDGMRRMIRERHGRLRMRIDPRYRDQPEEEEDRGHNPELI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCHHHCCCCCHHH
GSARVIRRAMEEDQKERPPMVMEPDEAAADTRTAEQQSLFEAEQGSAPQPGGAPEPQPEV
HHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
APAPNPSAVERQPESTPEPREAPRQEPRIEPKAAPKTPREPQPVLEVIVVHLIAHRGAPF
CCCCCCHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
DGGALLRMLLEAGLRYGRMNIFHRHVSVNGADDLQFSMANAVEPGTFDLDTMESKTFAGV
CHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHCCCCCCCCHHHHCCCHHEEE
TFFLKLPGPTDARSALDKMLSICQRLASELDGELKDEQHSVLTPQTMEHLRQRVQEFERR
EEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCHHHHHHHHHHHHHHHHH
QRVPSV
HCCCCC
>Mature Secondary Structure 
GLNLETLIGILVILILLILVDGMRRMIRERHGRLRMRIDPRYRDQPEEEEDRGHNPELI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCHHHCCCCCHHH
GSARVIRRAMEEDQKERPPMVMEPDEAAADTRTAEQQSLFEAEQGSAPQPGGAPEPQPEV
HHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
APAPNPSAVERQPESTPEPREAPRQEPRIEPKAAPKTPREPQPVLEVIVVHLIAHRGAPF
CCCCCCHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
DGGALLRMLLEAGLRYGRMNIFHRHVSVNGADDLQFSMANAVEPGTFDLDTMESKTFAGV
CHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHCCCCCCCCHHHHCCCHHEEE
TFFLKLPGPTDARSALDKMLSICQRLASELDGELKDEQHSVLTPQTMEHLRQRVQEFERR
EEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCHHHHHHHHHHHHHHHHH
QRVPSV
HCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA