Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is ypjH [H]

Identifier: 110833781

GI number: 110833781

Start: 1028796

End: 1029953

Strand: Direct

Name: ypjH [H]

Synonym: ABO_0920

Alternate gene names: 110833781

Gene position: 1028796-1029953 (Clockwise)

Preceding gene: 110833780

Following gene: 110833782

Centisome position: 32.97

GC content: 45.77

Gene sequence:

>1158_bases
GTGGCCTGGCTAAAAGCGGATCTGGGAATGGATAAAATACGCGTACTTCATTGTTTGGAGACAATTGGGTCTGGTGGGGT
TGAGCAAACACGGCTTTCACTTGTTAAGTGCCTTGATTCTTCTAGGTATGAACAGAGGATTATCTGTACTAAAGCAATAG
GTGGGCTGCCTGAACTTTTTCAACAAGAGGGTTGTGAAATAGTTGAGGTTGGCGAGTTTGAAAAGGTGTTTGACTTTGAG
AGGTATCGGCGTGCTGCTGCAGCGGTGAAGGACTTTAAGCCCCATATTATTCATGGGGCAGTTTTCGAGGGGGTCAACAT
GGCCGCAATCGTTGGCAGACGGTGCAGTGTTCCTGTAATTATTGGTGAAGAGACTAGCGATCCACAAAATAGAAGCTGGA
AGGGAAGCTTGCTTTATCGATTCCTGGTTTTTTTTATTCATCATATGGTTGCAGTCTCCCCCGCAGTTGAGCGCTACCTG
AGAAATAAGATTTTTGTTCCCAAGTATAAAGTCACCATGGTTGCCAATGGGGTTGCAGAAAAGCCCGCCCCTGCAAGCGA
GGAGGTTGTTTGCCTAAGGAAGGAGTTGGGAATAAGTGACTCTGACTTTGTGATCGGCACTGTTGGACGACTTTTTGACG
AGCATAAAAGGGTAAGTGATTTACTTAGAGCATTCGAGATGCTTTTGGAGCATTCGGCCAACGCGAAGTTGTTGATCGTC
GGCACAGGGCCTGACGAAGATATGCTTAAAACGATGGCGAAGAATCTGGGTGTATTAAACAGGGTGATATTCGCAGGTTA
TCAAGTCAATACTCGAATTTACTATGAGCTAATGGATGTTTTTTGTTTGCCATCAGCTTTTGAAGCATTCGGGTTGGTTC
TTGTGGAGGCAATGTATGCTGGGGTTCCTATTGTTGCTACGAGGACGGGCGGGATTCCAAAGGTGGTGGTTGAGAACGAA
ACGGCACTTTTGAGCCCTCCGTTTGACCCCAAAGTCTTGTCTCACAATATTTTAAAACTATACACGTCATCGGAATTAAG
AGATAAATTTTCTGTTGCTGGCCTGGCGAGGGCCAGAAGGGAGTTTAGCGAAGACCGATATGTGTCTGATATAGACACCC
TCTACACTCGTCTTCTTTCTGAACGCGGTTTGATATGA

Upstream 100 bases:

>100_bases
CAACGAGAAAATTTAACTGAGATTGGCGAATGTGCTAAAGAGTCCGTTAGAGGCAGATTTGAGCCTGAGAATTATATGGT
AGAGCTGGACAATCTTTATA

Downstream 100 bases:

>100_bases
ATGTTTTGTTCGTGACCTGGGACGGCCCTCAAGTCTCTTATCTTGAAAGCCTGTTTTTGCCTATTTTTAAGCAGCTTCAA
CATTTCGGTTTGCACTTTCA

Product: group 1 glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 385; Mature: 384

Protein sequence:

>385_residues
MAWLKADLGMDKIRVLHCLETIGSGGVEQTRLSLVKCLDSSRYEQRIICTKAIGGLPELFQQEGCEIVEVGEFEKVFDFE
RYRRAAAAVKDFKPHIIHGAVFEGVNMAAIVGRRCSVPVIIGEETSDPQNRSWKGSLLYRFLVFFIHHMVAVSPAVERYL
RNKIFVPKYKVTMVANGVAEKPAPASEEVVCLRKELGISDSDFVIGTVGRLFDEHKRVSDLLRAFEMLLEHSANAKLLIV
GTGPDEDMLKTMAKNLGVLNRVIFAGYQVNTRIYYELMDVFCLPSAFEAFGLVLVEAMYAGVPIVATRTGGIPKVVVENE
TALLSPPFDPKVLSHNILKLYTSSELRDKFSVAGLARARREFSEDRYVSDIDTLYTRLLSERGLI

Sequences:

>Translated_385_residues
MAWLKADLGMDKIRVLHCLETIGSGGVEQTRLSLVKCLDSSRYEQRIICTKAIGGLPELFQQEGCEIVEVGEFEKVFDFE
RYRRAAAAVKDFKPHIIHGAVFEGVNMAAIVGRRCSVPVIIGEETSDPQNRSWKGSLLYRFLVFFIHHMVAVSPAVERYL
RNKIFVPKYKVTMVANGVAEKPAPASEEVVCLRKELGISDSDFVIGTVGRLFDEHKRVSDLLRAFEMLLEHSANAKLLIV
GTGPDEDMLKTMAKNLGVLNRVIFAGYQVNTRIYYELMDVFCLPSAFEAFGLVLVEAMYAGVPIVATRTGGIPKVVVENE
TALLSPPFDPKVLSHNILKLYTSSELRDKFSVAGLARARREFSEDRYVSDIDTLYTRLLSERGLI
>Mature_384_residues
AWLKADLGMDKIRVLHCLETIGSGGVEQTRLSLVKCLDSSRYEQRIICTKAIGGLPELFQQEGCEIVEVGEFEKVFDFER
YRRAAAAVKDFKPHIIHGAVFEGVNMAAIVGRRCSVPVIIGEETSDPQNRSWKGSLLYRFLVFFIHHMVAVSPAVERYLR
NKIFVPKYKVTMVANGVAEKPAPASEEVVCLRKELGISDSDFVIGTVGRLFDEHKRVSDLLRAFEMLLEHSANAKLLIVG
TGPDEDMLKTMAKNLGVLNRVIFAGYQVNTRIYYELMDVFCLPSAFEAFGLVLVEAMYAGVPIVATRTGGIPKVVVENET
ALLSPPFDPKVLSHNILKLYTSSELRDKFSVAGLARARREFSEDRYVSDIDTLYTRLLSERGLI

Specific function: Adds A Galactose Goup To A Glucose Group Of Lps. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 43060; Mature: 42928

Theoretical pI: Translated: 7.19; Mature: 7.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAWLKADLGMDKIRVLHCLETIGSGGVEQTRLSLVKCLDSSRYEQRIICTKAIGGLPELF
CCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHH
QQEGCEIVEVGEFEKVFDFERYRRAAAAVKDFKPHIIHGAVFEGVNMAAIVGRRCSVPVI
HHCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCHHEEHHHHCCCCHHHHHCCCCCCCEE
IGEETSDPQNRSWKGSLLYRFLVFFIHHMVAVSPAVERYLRNKIFVPKYKVTMVANGVAE
ECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCC
KPAPASEEVVCLRKELGISDSDFVIGTVGRLFDEHKRVSDLLRAFEMLLEHSANAKLLIV
CCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE
GTGPDEDMLKTMAKNLGVLNRVIFAGYQVNTRIYYELMDVFCLPSAFEAFGLVLVEAMYA
ECCCCHHHHHHHHHHHHHHHHHHHCCEEECHHHHHHHHHHHHCHHHHHHHHHHHHHHHHC
GVPIVATRTGGIPKVVVENETALLSPPFDPKVLSHNILKLYTSSELRDKFSVAGLARARR
CCCEEEECCCCCCEEEEECCCEEECCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
EFSEDRYVSDIDTLYTRLLSERGLI
HHHCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AWLKADLGMDKIRVLHCLETIGSGGVEQTRLSLVKCLDSSRYEQRIICTKAIGGLPELF
CCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHH
QQEGCEIVEVGEFEKVFDFERYRRAAAAVKDFKPHIIHGAVFEGVNMAAIVGRRCSVPVI
HHCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCHHEEHHHHCCCCHHHHHCCCCCCCEE
IGEETSDPQNRSWKGSLLYRFLVFFIHHMVAVSPAVERYLRNKIFVPKYKVTMVANGVAE
ECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCC
KPAPASEEVVCLRKELGISDSDFVIGTVGRLFDEHKRVSDLLRAFEMLLEHSANAKLLIV
CCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE
GTGPDEDMLKTMAKNLGVLNRVIFAGYQVNTRIYYELMDVFCLPSAFEAFGLVLVEAMYA
ECCCCHHHHHHHHHHHHHHHHHHHCCEEECHHHHHHHHHHHHCHHHHHHHHHHHHHHHHC
GVPIVATRTGGIPKVVVENETALLSPPFDPKVLSHNILKLYTSSELRDKFSVAGLARARR
CCCEEEECCCCCCEEEEECCCEEECCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
EFSEDRYVSDIDTLYTRLLSERGLI
HHHCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Hexosyltransferases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]