| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
Click here to switch to the map view.
The map label for this gene is 110833782
Identifier: 110833782
GI number: 110833782
Start: 1029950
End: 1031164
Strand: Direct
Name: 110833782
Synonym: ABO_0921
Alternate gene names: NA
Gene position: 1029950-1031164 (Clockwise)
Preceding gene: 110833781
Following gene: 110833783
Centisome position: 33.01
GC content: 50.7
Gene sequence:
>1215_bases ATGAATGTTTTGTTCGTGACCTGGGACGGCCCTCAAGTCTCTTATCTTGAAAGCCTGTTTTTGCCTATTTTTAAGCAGCT TCAACATTTCGGTTTGCACTTTCACGTCCTCCAGTTTTCATGGTCCTCCGCTGAAGTGACGAATCGAAGAAAGCTGGAAT GCGAATCGAAGTGCTGTAGCTATACATACGTCCCTGTCATTCGTCGGCACGTTGCCCTTGGCGGGTTGCTTACTTCCTTG CTGGGCGCAAGACAGGTTCGCAAGGCTATTAATGAACATGATATTGATATCATCATGGCGCGTAGCACACTTCCCGCGTT GAGCTCACTTTTGTATTTGCGGGGCAAAAAAACATCGTTTGTGTTTGATGCAGACGGTCTTCCTCTTGATGAGCGTGTTG ATTTTGCAGGTCAGCGTCCCTCCAGCCTGGTTTATCGCCTTCTTAGGGACGTTGAGTCACAGGCCGTTCGGCGTGCAGAT GTGGTCCTGACTCGTTCCCACAAAGTGATTTCTATCCTTCAAGCCCGGGCAGGTGCGGGCACTGCGGCCGAAAAGTTTCA TGTTGTCAGTAATGGCCGTGATAAAGCGTTGTTCTCACCTCGAGAGACGTCGGACTGTATTGCGCTAAAAGAGCGCTTGG GTATGCCTGCTGATGCTCCCTTAGTGGTTTATGCTGGCTCGCTTGGACCTCAGTATTTACCTGAGGCTATGTTGTCTTTG TTTAGCCTTATCCGCGAGTCCCGCCCGGATGCTCACTTTCTTGTGCTAAGTGGTTCCCCTGAAGTAATGACTGACCTGGT TTTTTCTTATGACAGTGGCCTTGCTTCTAGCGTGACTGTGATGCGCGTTGACGCTAATGAGGTGCCTCAATGGCTTGCTG CTGCTGATCTTGGGCTGGCGTTCCGCGAACCTACCTTCTCTATGCAAGGGGTGGCCCCAATCAAGTTGGGTGAATACCTT CTGTGTGGTCTTCCGGTAGTGGCCACCCGTGGGGTAGGGGATTCTCATTTCATTGATGAAAACTCTGGATTTCTCGTCGA TGGCTGTGATTCTGACACTTTGGCATCCGTGGCTGACTGGTTTATCCATAAGGTGCTGCCATCGCGAGAGGGGTATCGCT CCCATTGTCGTTCCGTGGGTGTTGAACACTTTTCCCTCGAAGCCAGCGTTGAAGCCTATCGTAAGGCGCTGTTGTCTGTT CAGGTTGAATCATGA
Upstream 100 bases:
>100_bases TTGCTGGCCTGGCGAGGGCCAGAAGGGAGTTTAGCGAAGACCGATATGTGTCTGATATAGACACCCTCTACACTCGTCTT CTTTCTGAACGCGGTTTGAT
Downstream 100 bases:
>100_bases GCAGGCGTGTGCTGGTGCTTCCCAAGTATGCGCGTAAAGGTGCCAGCTCCCGCCTGCGCACCTTTCAGTATTTGCCATTT CTCGAGGATAAAGGGTGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: Group 1 Glycosyl Transferase; Glycosyltransferase-Like Protein; Glycosyl Transferase Group 1 Family Protein; Glycosyl Transferase
Number of amino acids: Translated: 404; Mature: 404
Protein sequence:
>404_residues MNVLFVTWDGPQVSYLESLFLPIFKQLQHFGLHFHVLQFSWSSAEVTNRRKLECESKCCSYTYVPVIRRHVALGGLLTSL LGARQVRKAINEHDIDIIMARSTLPALSSLLYLRGKKTSFVFDADGLPLDERVDFAGQRPSSLVYRLLRDVESQAVRRAD VVLTRSHKVISILQARAGAGTAAEKFHVVSNGRDKALFSPRETSDCIALKERLGMPADAPLVVYAGSLGPQYLPEAMLSL FSLIRESRPDAHFLVLSGSPEVMTDLVFSYDSGLASSVTVMRVDANEVPQWLAAADLGLAFREPTFSMQGVAPIKLGEYL LCGLPVVATRGVGDSHFIDENSGFLVDGCDSDTLASVADWFIHKVLPSREGYRSHCRSVGVEHFSLEASVEAYRKALLSV QVES
Sequences:
>Translated_404_residues MNVLFVTWDGPQVSYLESLFLPIFKQLQHFGLHFHVLQFSWSSAEVTNRRKLECESKCCSYTYVPVIRRHVALGGLLTSL LGARQVRKAINEHDIDIIMARSTLPALSSLLYLRGKKTSFVFDADGLPLDERVDFAGQRPSSLVYRLLRDVESQAVRRAD VVLTRSHKVISILQARAGAGTAAEKFHVVSNGRDKALFSPRETSDCIALKERLGMPADAPLVVYAGSLGPQYLPEAMLSL FSLIRESRPDAHFLVLSGSPEVMTDLVFSYDSGLASSVTVMRVDANEVPQWLAAADLGLAFREPTFSMQGVAPIKLGEYL LCGLPVVATRGVGDSHFIDENSGFLVDGCDSDTLASVADWFIHKVLPSREGYRSHCRSVGVEHFSLEASVEAYRKALLSV QVES >Mature_404_residues MNVLFVTWDGPQVSYLESLFLPIFKQLQHFGLHFHVLQFSWSSAEVTNRRKLECESKCCSYTYVPVIRRHVALGGLLTSL LGARQVRKAINEHDIDIIMARSTLPALSSLLYLRGKKTSFVFDADGLPLDERVDFAGQRPSSLVYRLLRDVESQAVRRAD VVLTRSHKVISILQARAGAGTAAEKFHVVSNGRDKALFSPRETSDCIALKERLGMPADAPLVVYAGSLGPQYLPEAMLSL FSLIRESRPDAHFLVLSGSPEVMTDLVFSYDSGLASSVTVMRVDANEVPQWLAAADLGLAFREPTFSMQGVAPIKLGEYL LCGLPVVATRGVGDSHFIDENSGFLVDGCDSDTLASVADWFIHKVLPSREGYRSHCRSVGVEHFSLEASVEAYRKALLSV QVES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44537; Mature: 44537
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVLFVTWDGPQVSYLESLFLPIFKQLQHFGLHFHVLQFSWSSAEVTNRRKLECESKCCS CEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHCCCHHCCHHHHHCC YTYVPVIRRHVALGGLLTSLLGARQVRKAINEHDIDIIMARSTLPALSSLLYLRGKKTSF EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHCCCCCEE VFDADGLPLDERVDFAGQRPSSLVYRLLRDVESQAVRRADVVLTRSHKVISILQARAGAG EECCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHCCCC TAAEKFHVVSNGRDKALFSPRETSDCIALKERLGMPADAPLVVYAGSLGPQYLPEAMLSL CHHHHEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHH FSLIRESRPDAHFLVLSGSPEVMTDLVFSYDSGLASSVTVMRVDANEVPQWLAAADLGLA HHHHHHCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHCCCE FREPTFSMQGVAPIKLGEYLLCGLPVVATRGVGDSHFIDENSGFLVDGCDSDTLASVADW ECCCCCCCCCCCCHHHCCHHHHCCCCEEECCCCCCCEEECCCCEEEECCCCHHHHHHHHH FIHKVLPSREGYRSHCRSVGVEHFSLEASVEAYRKALLSVQVES HHHHHCCCCCCHHHHHHHCCCHHEEHHHHHHHHHHHHHEEEECC >Mature Secondary Structure MNVLFVTWDGPQVSYLESLFLPIFKQLQHFGLHFHVLQFSWSSAEVTNRRKLECESKCCS CEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHCCCHHCCHHHHHCC YTYVPVIRRHVALGGLLTSLLGARQVRKAINEHDIDIIMARSTLPALSSLLYLRGKKTSF EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHCCCCCEE VFDADGLPLDERVDFAGQRPSSLVYRLLRDVESQAVRRADVVLTRSHKVISILQARAGAG EECCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHCCCC TAAEKFHVVSNGRDKALFSPRETSDCIALKERLGMPADAPLVVYAGSLGPQYLPEAMLSL CHHHHEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHH FSLIRESRPDAHFLVLSGSPEVMTDLVFSYDSGLASSVTVMRVDANEVPQWLAAADLGLA HHHHHHCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHCCCE FREPTFSMQGVAPIKLGEYLLCGLPVVATRGVGDSHFIDENSGFLVDGCDSDTLASVADW ECCCCCCCCCCCCHHHCCHHHHCCCCEEECCCCCCCEEECCCCEEEECCCCHHHHHHHHH FIHKVLPSREGYRSHCRSVGVEHFSLEASVEAYRKALLSVQVES HHHHHCCCCCCHHHHHHHCCCHHEEHHHHHHHHHHHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA