| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is wzc [H]
Identifier: 110833768
GI number: 110833768
Start: 1013133
End: 1015343
Strand: Direct
Name: wzc [H]
Synonym: ABO_0907
Alternate gene names: 110833768
Gene position: 1013133-1015343 (Clockwise)
Preceding gene: 110833767
Following gene: 110833769
Centisome position: 32.47
GC content: 48.58
Gene sequence:
>2211_bases ATGGCAGAAAATAACAGCATGAAACGGCATCTATCAGCTAACGATGCAGAGCCTGATATCGACTTCGCACTCCTGCTGGC CGTGCTCGTGGAGCATTGGCTATTAATTGCATCCACGGCAGTGGTTGCGATGCTGGCAGCGATTAGCTATGTCATGTTTG CCACGCCTATTTATAAAGGCGATGCGCTCTTACAGGTTGAGCAGAAAAGCAGTGGTGTGCCCGGCCTTTCTGAACTCAAT CAGATGTTTGAGCAGGAATCCTCCACTGCGGCTGAAATTGAAATTCTTCGCTCGCGCATGATTCTCAGAGAGGTGATTTC ACAGCTCAAAATGGATATTCAAGTCCAGCCTGAGCGAAATTCCCTGTGGGGAAAAATGACGGCTCCTGATCCTGCGCCGC CTTTCTTACCTCGACCCGCATTTGCGGGTTATCGAGACAGCGAAACTTTTATAAAGGTCAGTGCCTTTAATGTGCCAGAC CGTCTTTTGGGTCGATCATTCAAGATTATCGAGGAGAAAGGACAGCCGGCATTGTACTTTGAGGGCGGCCTTGTGGGTAC GGCGCCTCTTGGAAAACCGATTATCAGTGAAGATGGAAGTGTGCGTTTGTTTATCACTGACTGGGTGTTTGGCGGCGAGC CAGTCTTAATTACTCGTTTACCCGAAATCGCAGCGATTAACCGACTACGAGGGATGTTGTCAGTTCAAGAAATTGGGAAA ACGGGTATGTTGTCCATGACAGCGACGGGGCCCGACAAGCAACAAATCAAAGCAGTTCTCGATACGATCAGCAACGTCTA CGTATTGCAGAATATAGAGCGTCGTTCGGCAGAAGCGGAAAATAGCCTAGCGTTTCTTGGAAAACAATTGCCTGAAATTA AGGAAAAATTGACGGCCGCAGAAGAAAAATTGAATGCCTATCGGTTGGAAAGTGAATCTGTGGATTTGACCATGGAAACA CAATCAGTACTGGAACGAAGTGTGGGGCTGGAAGCAAAAATCAATGAGCTGAAAATCCAAGAAGGCGAAATTGCCAGCCG CTTCACCCGCGAGCACCCCACCTACCAGACGTTAATCCGGCAGCGGAGGTCTCTGGTCGAAGAAAAAAACCAACTGGACC AACAGATAAAAGATCTTCCTAAAACCCAGCAGGAAATACTACGTTTGATGCGCGATGTGGAAGTAACGCAGCAAATTTAT GTTGGGCTACTTAACAAGACTCAAGAGCTGCGCATTCTTAAAGCCGGCACGGTGGGTAGTGTCCGCATAATTGATGAAGC GCTAGTCCAGCCCGCCCCGATCAAACCCAAAAAATCTCTTGTCGTTGTTATTGCGACGATGCTTGGCGCGGGGGCTGCAG CCGGCTTGGTTCTAATGCGGTCCCTTCTTAGTAAAGGTATTGAATCCCCAGAAAAACTGGAAGAGCAGGGGGTGTCTGTT TACGCCGCTATACCATTGTCAGAACACCAGCAAAAAGCAGAACGCATGAGCTCATTGGTTAAGCGTCGCAAGAGCAGTAA AGGCCTACATAGCATTCCTCTACTGGCGGATATTGATCCTAATGATCTTGCCATTGAAGCCTTGCGCAGCCTCCGTACTA GCTTGCACTTTGCGATGATGGACGCCAGCAATAATATTCTTATGGTAGCTGGTCCAAGTCCTGGTGTGGGTAAATCATTT GTGTCCGCGAACCTGGCCGCAGTATTGGCAAAAGCAGGCCAGAAGATTCTCGTCATTGATGCGGATATGCGCAAAGGACA CTTGCATCGTTTTTTTGCGCGAGGCCATGAAATTGGATTGTCCGGGTATCTTTCAGGCCAGCACACCAAGGAAGAGATTA TCCTTGCAACGGAGGATGATAACCTGCATTTAATTCCTCGTGGCAAGGCTCCGCCGAACCCGTCTGAACTGCTCATGCAT GCGCGCTTTTCTAACTTAATGGAAGAGCTTAGCGATGAATATGATCTAGTGCTGATAGACACGCCCCCAATCCTTGCGGT CACGGATTCTGCCATTATTGGACAGTTGGCGGGTAGCAGCCTGCTAGTCACACGTTATGGCGTTAACTCCGTTAAAGAAG TGGACGCAGCCTTGACCCGCTTTGCCCAAAACAATGTTGAAATTAAAGGGGCGATCCTGAATTGCATGGAACGGCGGGCC ACTAATGAATACAGCTACTACGCTTATGAATACAGTAAAAGTAACGATTAG
Upstream 100 bases:
>100_bases GGATAGTGCCGCGCACGCGTGGGCTAAAAAAATTTAGGGATCAGGGGTAAGTAGGTAGAAAGTCCCAGGGTCGAGAAGTA TACAACCGGTTTATAAACGA
Downstream 100 bases:
>100_bases AATCGTTCCACTGTAGAAGCCTTCGTTGGCAGCGCGATAGGCGGTAATAACTAACCGATTGAAATCAGTGTAGGGGCCGG TACAGACCGGAAAGGTAAGA
Product: tyrosine-protein kinase
Products: ADP; protein tyrosine phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 736; Mature: 735
Protein sequence:
>736_residues MAENNSMKRHLSANDAEPDIDFALLLAVLVEHWLLIASTAVVAMLAAISYVMFATPIYKGDALLQVEQKSSGVPGLSELN QMFEQESSTAAEIEILRSRMILREVISQLKMDIQVQPERNSLWGKMTAPDPAPPFLPRPAFAGYRDSETFIKVSAFNVPD RLLGRSFKIIEEKGQPALYFEGGLVGTAPLGKPIISEDGSVRLFITDWVFGGEPVLITRLPEIAAINRLRGMLSVQEIGK TGMLSMTATGPDKQQIKAVLDTISNVYVLQNIERRSAEAENSLAFLGKQLPEIKEKLTAAEEKLNAYRLESESVDLTMET QSVLERSVGLEAKINELKIQEGEIASRFTREHPTYQTLIRQRRSLVEEKNQLDQQIKDLPKTQQEILRLMRDVEVTQQIY VGLLNKTQELRILKAGTVGSVRIIDEALVQPAPIKPKKSLVVVIATMLGAGAAAGLVLMRSLLSKGIESPEKLEEQGVSV YAAIPLSEHQQKAERMSSLVKRRKSSKGLHSIPLLADIDPNDLAIEALRSLRTSLHFAMMDASNNILMVAGPSPGVGKSF VSANLAAVLAKAGQKILVIDADMRKGHLHRFFARGHEIGLSGYLSGQHTKEEIILATEDDNLHLIPRGKAPPNPSELLMH ARFSNLMEELSDEYDLVLIDTPPILAVTDSAIIGQLAGSSLLVTRYGVNSVKEVDAALTRFAQNNVEIKGAILNCMERRA TNEYSYYAYEYSKSND
Sequences:
>Translated_736_residues MAENNSMKRHLSANDAEPDIDFALLLAVLVEHWLLIASTAVVAMLAAISYVMFATPIYKGDALLQVEQKSSGVPGLSELN QMFEQESSTAAEIEILRSRMILREVISQLKMDIQVQPERNSLWGKMTAPDPAPPFLPRPAFAGYRDSETFIKVSAFNVPD RLLGRSFKIIEEKGQPALYFEGGLVGTAPLGKPIISEDGSVRLFITDWVFGGEPVLITRLPEIAAINRLRGMLSVQEIGK TGMLSMTATGPDKQQIKAVLDTISNVYVLQNIERRSAEAENSLAFLGKQLPEIKEKLTAAEEKLNAYRLESESVDLTMET QSVLERSVGLEAKINELKIQEGEIASRFTREHPTYQTLIRQRRSLVEEKNQLDQQIKDLPKTQQEILRLMRDVEVTQQIY VGLLNKTQELRILKAGTVGSVRIIDEALVQPAPIKPKKSLVVVIATMLGAGAAAGLVLMRSLLSKGIESPEKLEEQGVSV YAAIPLSEHQQKAERMSSLVKRRKSSKGLHSIPLLADIDPNDLAIEALRSLRTSLHFAMMDASNNILMVAGPSPGVGKSF VSANLAAVLAKAGQKILVIDADMRKGHLHRFFARGHEIGLSGYLSGQHTKEEIILATEDDNLHLIPRGKAPPNPSELLMH ARFSNLMEELSDEYDLVLIDTPPILAVTDSAIIGQLAGSSLLVTRYGVNSVKEVDAALTRFAQNNVEIKGAILNCMERRA TNEYSYYAYEYSKSND >Mature_735_residues AENNSMKRHLSANDAEPDIDFALLLAVLVEHWLLIASTAVVAMLAAISYVMFATPIYKGDALLQVEQKSSGVPGLSELNQ MFEQESSTAAEIEILRSRMILREVISQLKMDIQVQPERNSLWGKMTAPDPAPPFLPRPAFAGYRDSETFIKVSAFNVPDR LLGRSFKIIEEKGQPALYFEGGLVGTAPLGKPIISEDGSVRLFITDWVFGGEPVLITRLPEIAAINRLRGMLSVQEIGKT GMLSMTATGPDKQQIKAVLDTISNVYVLQNIERRSAEAENSLAFLGKQLPEIKEKLTAAEEKLNAYRLESESVDLTMETQ SVLERSVGLEAKINELKIQEGEIASRFTREHPTYQTLIRQRRSLVEEKNQLDQQIKDLPKTQQEILRLMRDVEVTQQIYV GLLNKTQELRILKAGTVGSVRIIDEALVQPAPIKPKKSLVVVIATMLGAGAAAGLVLMRSLLSKGIESPEKLEEQGVSVY AAIPLSEHQQKAERMSSLVKRRKSSKGLHSIPLLADIDPNDLAIEALRSLRTSLHFAMMDASNNILMVAGPSPGVGKSFV SANLAAVLAKAGQKILVIDADMRKGHLHRFFARGHEIGLSGYLSGQHTKEEIILATEDDNLHLIPRGKAPPNPSELLMHA RFSNLMEELSDEYDLVLIDTPPILAVTDSAIIGQLAGSSLLVTRYGVNSVKEVDAALTRFAQNNVEIKGAILNCMERRAT NEYSYYAYEYSKSND
Specific function: Required for the extracellular polysaccharide colanic acid synthesis. The autophosphorylated form is inactive. Probably involved in the export of colanic acid from the cell to medium. Phosphorylates udg [H]
COG id: COG3206
COG function: function code M; Uncharacterized protein involved in exopolysaccharide biosynthesis
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the etk/wzc family [H]
Homologues:
Organism=Escherichia coli, GI87082032, Length=737, Percent_Identity=43.6906377204885, Blast_Score=588, Evalue=1e-169, Organism=Escherichia coli, GI1787216, Length=718, Percent_Identity=42.7576601671309, Blast_Score=535, Evalue=1e-153,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 - InterPro: IPR005702 - InterPro: IPR003856 [H]
Pfam domain/function: PF01656 CbiA; PF02706 Wzz [H]
EC number: 2.7.1.112 [C]
Molecular weight: Translated: 81152; Mature: 81021
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAENNSMKRHLSANDAEPDIDFALLLAVLVEHWLLIASTAVVAMLAAISYVMFATPIYKG CCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC DALLQVEQKSSGVPGLSELNQMFEQESSTAAEIEILRSRMILREVISQLKMDIQVQPERN CEEEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCC SLWGKMTAPDPAPPFLPRPAFAGYRDSETFIKVSAFNVPDRLLGRSFKIIEEKGQPALYF CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHCCCCHHHHCCCCCEEEE EGGLVGTAPLGKPIISEDGSVRLFITDWVFGGEPVLITRLPEIAAINRLRGMLSVQEIGK CCCEEECCCCCCCCCCCCCCEEEEEEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHCCC TGMLSMTATGPDKQQIKAVLDTISNVYVLQNIERRSAEAENSLAFLGKQLPEIKEKLTAA CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH EEKLNAYRLESESVDLTMETQSVLERSVGLEAKINELKIQEGEIASRFTREHPTYQTLIR HHHHHHHEECCCCCEEEEHHHHHHHHHCCCCEEHHHEEECCCHHHHHHHHCCCHHHHHHH QRRSLVEEKNQLDQQIKDLPKTQQEILRLMRDVEVTQQIYVGLLNKTQELRILKAGTVGS HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC VRIIDEALVQPAPIKPKKSLVVVIATMLGAGAAAGLVLMRSLLSKGIESPEKLEEQGVSV HHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCEE YAAIPLSEHQQKAERMSSLVKRRKSSKGLHSIPLLADIDPNDLAIEALRSLRTSLHFAMM EEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHEEEE DASNNILMVAGPSPGVGKSFVSANLAAVLAKAGQKILVIDADMRKGHLHRFFARGHEIGL ECCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHCCCCCCC SGYLSGQHTKEEIILATEDDNLHLIPRGKAPPNPSELLMHARFSNLMEELSDEYDLVLID EEEECCCCCCCEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEC TPPILAVTDSAIIGQLAGSSLLVTRYGVNSVKEVDAALTRFAQNNVEIKGAILNCMERRA CCCEEEEECHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHC TNEYSYYAYEYSKSND CCCCEEEEEEECCCCC >Mature Secondary Structure AENNSMKRHLSANDAEPDIDFALLLAVLVEHWLLIASTAVVAMLAAISYVMFATPIYKG CCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC DALLQVEQKSSGVPGLSELNQMFEQESSTAAEIEILRSRMILREVISQLKMDIQVQPERN CEEEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCC SLWGKMTAPDPAPPFLPRPAFAGYRDSETFIKVSAFNVPDRLLGRSFKIIEEKGQPALYF CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHCCCCHHHHCCCCCEEEE EGGLVGTAPLGKPIISEDGSVRLFITDWVFGGEPVLITRLPEIAAINRLRGMLSVQEIGK CCCEEECCCCCCCCCCCCCCEEEEEEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHCCC TGMLSMTATGPDKQQIKAVLDTISNVYVLQNIERRSAEAENSLAFLGKQLPEIKEKLTAA CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH EEKLNAYRLESESVDLTMETQSVLERSVGLEAKINELKIQEGEIASRFTREHPTYQTLIR HHHHHHHEECCCCCEEEEHHHHHHHHHCCCCEEHHHEEECCCHHHHHHHHCCCHHHHHHH QRRSLVEEKNQLDQQIKDLPKTQQEILRLMRDVEVTQQIYVGLLNKTQELRILKAGTVGS HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC VRIIDEALVQPAPIKPKKSLVVVIATMLGAGAAAGLVLMRSLLSKGIESPEKLEEQGVSV HHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCEE YAAIPLSEHQQKAERMSSLVKRRKSSKGLHSIPLLADIDPNDLAIEALRSLRTSLHFAMM EEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHEEEE DASNNILMVAGPSPGVGKSFVSANLAAVLAKAGQKILVIDADMRKGHLHRFFARGHEIGL ECCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHCCCCCCC SGYLSGQHTKEEIILATEDDNLHLIPRGKAPPNPSELLMHARFSNLMEELSDEYDLVLID EEEECCCCCCCEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEC TPPILAVTDSAIIGQLAGSSLLVTRYGVNSVKEVDAALTRFAQNNVEIKGAILNCMERRA CCCEEEEECHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHC TNEYSYYAYEYSKSND CCCCEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; a protein tyrosine [C]
Specific reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]