| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is wzb [C]
Identifier: 110833767
GI number: 110833767
Start: 1012773
End: 1013069
Strand: Direct
Name: wzb [C]
Synonym: ABO_0906
Alternate gene names: 110833767
Gene position: 1012773-1013069 (Clockwise)
Preceding gene: 110833766
Following gene: 110833768
Centisome position: 32.46
GC content: 48.48
Gene sequence:
>297_bases ATGGATGCCACAGCGCGGCAAGTCGCTGAAAATCATGGGCTCACTTGCCCTAAGCATGTAGCACGTAAACTGAGTTCAGC AATGTGTGCTGAATACGATTTGATTCTGGTGATGGAAGCGCATCAGAAGGAGCGTCTTTCTCGGCAGTTTCCAGAAGCTA GCGGAAAGACGTTTCTAGCAAGCCATTGGAATGGGCGACATAACATTCCGGATCCCTATAAGCGAGGGCGTGAGGCTTTC GAGTCTATTTATTTGTTAATGGATAGTGCCGCGCACGCGTGGGCTAAAAAAATTTAG
Upstream 100 bases:
>100_bases AAATATTTGTAGAAGTCCCACTTTGGCTGCACAACTCAAAGCACTAAGGCCCGAGAAAATCGTTGAATCAGCAGGGCTGG TTGGGTTGGAGGGCCAAGAT
Downstream 100 bases:
>100_bases GGATCAGGGGTAAGTAGGTAGAAAGTCCCAGGGTCGAGAAGTATACAACCGGTTTATAAACGAATGGCAGAAAATAACAG CATGAAACGGCATCTATCAG
Product: low molecular weight protein-tyrosine-phosphatase
Products: NA
Alternate protein names: ORF5 [H]
Number of amino acids: Translated: 98; Mature: 98
Protein sequence:
>98_residues MDATARQVAENHGLTCPKHVARKLSSAMCAEYDLILVMEAHQKERLSRQFPEASGKTFLASHWNGRHNIPDPYKRGREAF ESIYLLMDSAAHAWAKKI
Sequences:
>Translated_98_residues MDATARQVAENHGLTCPKHVARKLSSAMCAEYDLILVMEAHQKERLSRQFPEASGKTFLASHWNGRHNIPDPYKRGREAF ESIYLLMDSAAHAWAKKI >Mature_98_residues MDATARQVAENHGLTCPKHVARKLSSAMCAEYDLILVMEAHQKERLSRQFPEASGKTFLASHWNGRHNIPDPYKRGREAF ESIYLLMDSAAHAWAKKI
Specific function: Dephosphorylates Wzc. Required For The Extracellular Polysaccharide Colanic Acid Synthesis. Probably Involved In The Export Of Colanic Acid From The Cell To Medium. [C]
COG id: COG0394
COG function: function code T; Protein-tyrosine-phosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the low molecular weight phosphotyrosine protein phosphatase family [H]
Homologues:
Organism=Escherichia coli, GI1788375, Length=97, Percent_Identity=43.298969072165, Blast_Score=92, Evalue=5e-21, Organism=Escherichia coli, GI87081812, Length=88, Percent_Identity=39.7727272727273, Blast_Score=82, Evalue=6e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000106 - InterPro: IPR017867 [H]
Pfam domain/function: PF01451 LMWPc [H]
EC number: =3.1.3.48 [H]
Molecular weight: Translated: 11137; Mature: 11137
Theoretical pI: Translated: 9.22; Mature: 9.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDATARQVAENHGLTCPKHVARKLSSAMCAEYDLILVMEAHQKERLSRQFPEASGKTFLA CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHEEECHHHHHHHHHHCCCCCCCEEEE SHWNGRHNIPDPYKRGREAFESIYLLMDSAAHAWAKKI CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDATARQVAENHGLTCPKHVARKLSSAMCAEYDLILVMEAHQKERLSRQFPEASGKTFLA CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHEEECHHHHHHHHHHCCCCCCCEEEE SHWNGRHNIPDPYKRGREAFESIYLLMDSAAHAWAKKI CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7896702 [H]