| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110833757
Identifier: 110833757
GI number: 110833757
Start: 995668
End: 997038
Strand: Direct
Name: 110833757
Synonym: ABO_0896
Alternate gene names: NA
Gene position: 995668-997038 (Clockwise)
Preceding gene: 110833756
Following gene: 110833758
Centisome position: 31.91
GC content: 52.01
Gene sequence:
>1371_bases ATGGCAGGCATCGGTTTTGAGCTGCGCCGTCTGTTGCGTAAGGACACCTTGCTCGGGCTCATTCGTGCCTACGCCTATGC CGGAGTGATCAGCTCAGGTCCCTGGGTGTTATCGATCATCGGTATCCTGATTATCGGTATTTTCAGCCTGGGGATCGTGA TACCCAATGCGGCGGTGACGCAATTTCAGGTCACGGTCACCTATTTGATTGCGGTCAGTTTGACCCTCACCGGTATTGTC CAGCTGGCGTTTACTCGTTTCTGTGCCGACCGCTCGTTTGAAAAGCGCGAAGACCTGATTCTGCCTAATTTTGGCGGCGT TACCTTGCTGGTCACGATCTTTGCTGGGCTACTGTCGTTACCGGTGGCCATGTTCCTGTTTCCGGAGCAAAGCATTCTTT TCCGAGTGTTGTTGATCGCCTGTTTTGTAGTGTTGTGCAATATCTGGATCGCCACGGTATTCCTGTCTGGCATGAAGCAG TACAAGGCTATTCTTCTGCTGTACGCACTCGGGTACGGGATTACGGTTGTAGCGGCGCTATTGCTGCTGTTTCTGGGGCT GGAAGGGTTGTTGTTGGGCTTTCTGCTTGGGCAAGTCACCTTATTGGCAGGCATGCTGGTGCTGATCGTGCGGGGCTACC CTGCCGAGAGCGTGGTGTCGTTCGCCATGTTCAGTAAAAAATACCTGTACCCCTCCTTGATGCTGGTCGGCTTTTTCTAC AACGCCGGTGTGTGGGCCGACAAGGCCATGTTCTGGTTCTACGATGGCACCGGAAGCGATGTGATCGGGCCGCTTCGGGC TTCGTTAATCTACGATATCCCGGTATTCCTGTCGTATCTGTCGCTTATTCCTGGCATGGCAGTGTTTCTGGTGCGCATGG AAACGGACTTTGTGGAGTATTACTCCAACTTCTACGATGCAGTTCGTGAAGGCGGCTCGCTGTCTTATATTGAAGATATG CGCAATCGAATGGTCTTTGTGATTCGCCAGGGGATCTTCCAGATTCTCAAGATTCAGGCTATCTCGGCGCTGGTAATTAT GGTTGCCGGTGCGCAGATCTTTCATGCGCTGGGCATTTCGGAATTGTACCTACCGTTGCTCAAAGTGCAGTTGATTGCTA CCGCACTACAGGTGGTATTCCTCGCCATCATCAACGTGTTCTGCTACCTGGATCAGCGCCGCATGCTGGTGCTGCTGACC GGGTTGTTCTTCGTGCTTAATGTGATTTTTACTGGAATTAGCCTGTACCTAGGCCCTCAGTTTTTCGGTTTTGGTTTCTT GCTGGCCTTGGCTGTCTGTGTGTTGCTTGGCTTGTGGTTGGTCAGCCGCAAAATGGCAGAGCTGGAATATTCCACCTTCA TGCTTAATTGA
Upstream 100 bases:
>100_bases CCCAGGAAATGATGTTTGGCGCTTATCGGGATTTATACCGTTCTTTGCTTGATGATTCAGGCATTGCGGCCTCGGCCAGT AATAAGGAGGGCCGCCACTA
Downstream 100 bases:
>100_bases CAGGTGGTGTGTCGGATTGCCTCTTCTCTCACGGAGAAAGAACACACTGCCTTTCAGGCTTAACGTGGTTGTTGCCGTCG GCAAGGCCGGGAAGTCGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: Inner Membrane Protein; Polysaccharide Synthase Transmembrane Protein; Transmembrane Protein Cog
Number of amino acids: Translated: 456; Mature: 455
Protein sequence:
>456_residues MAGIGFELRRLLRKDTLLGLIRAYAYAGVISSGPWVLSIIGILIIGIFSLGIVIPNAAVTQFQVTVTYLIAVSLTLTGIV QLAFTRFCADRSFEKREDLILPNFGGVTLLVTIFAGLLSLPVAMFLFPEQSILFRVLLIACFVVLCNIWIATVFLSGMKQ YKAILLLYALGYGITVVAALLLLFLGLEGLLLGFLLGQVTLLAGMLVLIVRGYPAESVVSFAMFSKKYLYPSLMLVGFFY NAGVWADKAMFWFYDGTGSDVIGPLRASLIYDIPVFLSYLSLIPGMAVFLVRMETDFVEYYSNFYDAVREGGSLSYIEDM RNRMVFVIRQGIFQILKIQAISALVIMVAGAQIFHALGISELYLPLLKVQLIATALQVVFLAIINVFCYLDQRRMLVLLT GLFFVLNVIFTGISLYLGPQFFGFGFLLALAVCVLLGLWLVSRKMAELEYSTFMLN
Sequences:
>Translated_456_residues MAGIGFELRRLLRKDTLLGLIRAYAYAGVISSGPWVLSIIGILIIGIFSLGIVIPNAAVTQFQVTVTYLIAVSLTLTGIV QLAFTRFCADRSFEKREDLILPNFGGVTLLVTIFAGLLSLPVAMFLFPEQSILFRVLLIACFVVLCNIWIATVFLSGMKQ YKAILLLYALGYGITVVAALLLLFLGLEGLLLGFLLGQVTLLAGMLVLIVRGYPAESVVSFAMFSKKYLYPSLMLVGFFY NAGVWADKAMFWFYDGTGSDVIGPLRASLIYDIPVFLSYLSLIPGMAVFLVRMETDFVEYYSNFYDAVREGGSLSYIEDM RNRMVFVIRQGIFQILKIQAISALVIMVAGAQIFHALGISELYLPLLKVQLIATALQVVFLAIINVFCYLDQRRMLVLLT GLFFVLNVIFTGISLYLGPQFFGFGFLLALAVCVLLGLWLVSRKMAELEYSTFMLN >Mature_455_residues AGIGFELRRLLRKDTLLGLIRAYAYAGVISSGPWVLSIIGILIIGIFSLGIVIPNAAVTQFQVTVTYLIAVSLTLTGIVQ LAFTRFCADRSFEKREDLILPNFGGVTLLVTIFAGLLSLPVAMFLFPEQSILFRVLLIACFVVLCNIWIATVFLSGMKQY KAILLLYALGYGITVVAALLLLFLGLEGLLLGFLLGQVTLLAGMLVLIVRGYPAESVVSFAMFSKKYLYPSLMLVGFFYN AGVWADKAMFWFYDGTGSDVIGPLRASLIYDIPVFLSYLSLIPGMAVFLVRMETDFVEYYSNFYDAVREGGSLSYIEDMR NRMVFVIRQGIFQILKIQAISALVIMVAGAQIFHALGISELYLPLLKVQLIATALQVVFLAIINVFCYLDQRRMLVLLTG LFFVLNVIFTGISLYLGPQFFGFGFLLALAVCVLLGLWLVSRKMAELEYSTFMLN
Specific function: Unknown
COG id: COG4267
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50576; Mature: 50445
Theoretical pI: Translated: 8.60; Mature: 8.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGIGFELRRLLRKDTLLGLIRAYAYAGVISSGPWVLSIIGILIIGIFSLGIVIPNAAVT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHH QFQVTVTYLIAVSLTLTGIVQLAFTRFCADRSFEKREDLILPNFGGVTLLVTIFAGLLSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHH PVAMFLFPEQSILFRVLLIACFVVLCNIWIATVFLSGMKQYKAILLLYALGYGITVVAAL HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLLFLGLEGLLLGFLLGQVTLLAGMLVLIVRGYPAESVVSFAMFSKKYLYPSLMLVGFFY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH NAGVWADKAMFWFYDGTGSDVIGPLRASLIYDIPVFLSYLSLIPGMAVFLVRMETDFVEY HCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YSNFYDAVREGGSLSYIEDMRNRMVFVIRQGIFQILKIQAISALVIMVAGAQIFHALGIS HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH ELYLPLLKVQLIATALQVVFLAIINVFCYLDQRRMLVLLTGLFFVLNVIFTGISLYLGPQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCHH FFGFGFLLALAVCVLLGLWLVSRKMAELEYSTFMLN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AGIGFELRRLLRKDTLLGLIRAYAYAGVISSGPWVLSIIGILIIGIFSLGIVIPNAAVT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHH QFQVTVTYLIAVSLTLTGIVQLAFTRFCADRSFEKREDLILPNFGGVTLLVTIFAGLLSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHH PVAMFLFPEQSILFRVLLIACFVVLCNIWIATVFLSGMKQYKAILLLYALGYGITVVAAL HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLLFLGLEGLLLGFLLGQVTLLAGMLVLIVRGYPAESVVSFAMFSKKYLYPSLMLVGFFY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH NAGVWADKAMFWFYDGTGSDVIGPLRASLIYDIPVFLSYLSLIPGMAVFLVRMETDFVEY HCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YSNFYDAVREGGSLSYIEDMRNRMVFVIRQGIFQILKIQAISALVIMVAGAQIFHALGIS HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH ELYLPLLKVQLIATALQVVFLAIINVFCYLDQRRMLVLLTGLFFVLNVIFTGISLYLGPQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCHH FFGFGFLLALAVCVLLGLWLVSRKMAELEYSTFMLN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA