| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is fecA [H]
Identifier: 110833582
GI number: 110833582
Start: 810858
End: 813041
Strand: Direct
Name: fecA [H]
Synonym: ABO_0721
Alternate gene names: 110833582
Gene position: 810858-813041 (Clockwise)
Preceding gene: 110833581
Following gene: 110833583
Centisome position: 25.99
GC content: 52.88
Gene sequence:
>2184_bases ATGTATTTGCAGCGCCGCTTGCTTTGCTGTGCCATCGCCTCCGCTATGGCCGCTCCAGCTTTTGCTGATCAAGCCAATGA GCTGAAACCGGTACAGATTATTGGGGATCGTCAGAGCACTTTTAGCATCAGTGGCTCTGCCCACGTGCTTTCTAACGAAG ATTTGGAAGAAAAGGAAAACACCGATGTGCACCGCATGCTGCGCGACGTGCCTGGCGTGTATTTCCAGGAAGAAGATGGA TACGGCCTGCGCCCAAATATCGGTATCCGTGGTTCCGGCCGAGATCGCTCCAGTAAAATCTCTTTGATGGAAGATGGTGT GCTGATTGCGCCGGCCCCCTATGCTGCTCCGGCCGCTTATTATTTCCCTAGTGCCGGTCGTTTCTACGGTGTTGAGGTGT TGAAAGGGCCGGATACCTTGCGTTATGGGCCCTTCACCGTGGGCGGGTCCATTAACTTCCTGTCCACCCCGATTCCTGCC CGTGCGTCTGGCATGGTGAATGTGGAGGGTGGTGAAGATGGATCGCAGCGTGCCCATGCCTATTATGGGGCCACCGAAGG TCAGTTTGGTTTCATGCTGGAAACCCATCAACAACGAGCTCAAGGCTTCAAGGATATCGACCGTTCCAACCGCGATAGTG GTTTTGATAAGCGTGATTATGTCGCCAAGCTGCGCTGGCAGGCCCCGGAAACCGCGGATATTCAACAGGCATTTGAGTTG AAGCTGGAGCATTCCAGTGAGGTTTCTGATGAAACCTACCTGGGCCTGACCGACCGGGATTTCGAGAATGATGCCAACCG TCGCTACGGTATGAGCGATATCGATCAGATGGATAATGATCGAGACGCGGTATCTTTGCGCCATACCTTAGTGTTTGACG AGAACACCCAGTTGAACTCCGTGGTGTATCGTAACGAGTTCAACCGTAACTGGTACAAATTGGCCAGTATTGGTGGCCAG AGCATTGGTGGCTTTGTGGCGGATGCTAACGCTAATGGTGGTACTAAGCAGGCCGTGTTGAGTGGTGCTGCTGATGCCAC GGATTTGGTATTCAAGAACAATAATCGGGAGTACATCTCTGAAGGTGTGCAGACTGAATTGAATCACCGTTTCCAGACCG GTTCTGTGGACAATGATCTGATTGTCGGGGCTCGTTACCATCAGGATGAAGTGGATCGTTATCAGCCCACGGACACGTTT GATCAGGTCAATGGCAGCTTGGTGTACCAGTCGTCCACCTTGCCCACGGGGGGGGATAACCGTCTGGAAAATGCGGATGC TGTGTCTGCCTGGATTATAGATCACGCTTATGTTGGTGATTTTATTGTCACCGGCTCATTGCGCTACGAGAACGTGGAAA GCAAGAGCAAGCGTTGGGGCGATCCGGCACGTAACACGGTGAGCTCACGCACTGAAAATCGTAACGAAGAACTGATGGCG GGGCTGGGGGCTACTTGGCTGCTCAATGACAATTGGTCGTTGTTAGCGGGCGTTCACCAGGGCTTTGCGCCGGCAGGTGC GTCTTCCCAGAAAGGCACTGATGCGGAAAAAAGCGTTAACTACGAAACCGGTTTCCGCTACTGGCAGGAAAACTTCAGTG CGGATGTGATTGCGTTCTACAGCGATTATGAAAATACCATTCAGAACTGTTCTATTGCTAATCCATGCCCCAATGGCAAT GACTTTGGCACCCAGAGCTTTGGTGAGTCGGAAGTACGGGGTCTGGAAGTGGGCTTGAGCAGTGTGATTTGGGAAGGTGA TACCGGCCTGCGAGCGCCGGTACGGCTGGCTTATACCTACACCGACGGTGAAATCACCAAGGATGCGGATGACCTGTCGG TGCTGGAGGGCGATGTGTTGCCTTACCTGCCTGAGCATTTGGCTAGCCTGACGTTTGGTTTGGAGAAGCCGGCGGCTTGG TCTGCGCTGATGTCAGTCAGTCACACCGATGGCATGTGTATCGATAATAGCTGTGACCGCCCGGGAGAAGTCACCACGTT CAAACGCACCAGCGATTACGTGATTGCCGATATCGTGGCGACTTATCAGGTGAACAGTGATATGGAAGTGTATGTCAAAG TGGATAACGTGTTTGACGATCAAGAAATCGTTTCTCGTGACCCTGCCGGTGCTCGCCCCAACAAGCCGCGTACTGGCTAC GTGGGCATGAAAGTGCATTTCTGA
Upstream 100 bases:
>100_bases GGAATGCAAATGAGAACTATAGCATATTGATATTGATTCTTTTTCGTTATATCTTCTGCGCGCTTACATTATTTACATTT GCGTCGGGAAGGGAAAAGTC
Downstream 100 bases:
>100_bases GGTTGCTCTTTGTGGTAAGAAGAAAAGGGGGCTTTAAGCCCCCTTTTCTGTTTCGTGCCTCTTGAAGCTGCGCCTCTGTG ACCCCATCTGGGATGGGCAG
Product: FecA-like outer membrane receptor
Products: NA
Alternate protein names: Iron(III) dicitrate transport protein fecA [H]
Number of amino acids: Translated: 727; Mature: 727
Protein sequence:
>727_residues MYLQRRLLCCAIASAMAAPAFADQANELKPVQIIGDRQSTFSISGSAHVLSNEDLEEKENTDVHRMLRDVPGVYFQEEDG YGLRPNIGIRGSGRDRSSKISLMEDGVLIAPAPYAAPAAYYFPSAGRFYGVEVLKGPDTLRYGPFTVGGSINFLSTPIPA RASGMVNVEGGEDGSQRAHAYYGATEGQFGFMLETHQQRAQGFKDIDRSNRDSGFDKRDYVAKLRWQAPETADIQQAFEL KLEHSSEVSDETYLGLTDRDFENDANRRYGMSDIDQMDNDRDAVSLRHTLVFDENTQLNSVVYRNEFNRNWYKLASIGGQ SIGGFVADANANGGTKQAVLSGAADATDLVFKNNNREYISEGVQTELNHRFQTGSVDNDLIVGARYHQDEVDRYQPTDTF DQVNGSLVYQSSTLPTGGDNRLENADAVSAWIIDHAYVGDFIVTGSLRYENVESKSKRWGDPARNTVSSRTENRNEELMA GLGATWLLNDNWSLLAGVHQGFAPAGASSQKGTDAEKSVNYETGFRYWQENFSADVIAFYSDYENTIQNCSIANPCPNGN DFGTQSFGESEVRGLEVGLSSVIWEGDTGLRAPVRLAYTYTDGEITKDADDLSVLEGDVLPYLPEHLASLTFGLEKPAAW SALMSVSHTDGMCIDNSCDRPGEVTTFKRTSDYVIADIVATYQVNSDMEVYVKVDNVFDDQEIVSRDPAGARPNKPRTGY VGMKVHF
Sequences:
>Translated_727_residues MYLQRRLLCCAIASAMAAPAFADQANELKPVQIIGDRQSTFSISGSAHVLSNEDLEEKENTDVHRMLRDVPGVYFQEEDG YGLRPNIGIRGSGRDRSSKISLMEDGVLIAPAPYAAPAAYYFPSAGRFYGVEVLKGPDTLRYGPFTVGGSINFLSTPIPA RASGMVNVEGGEDGSQRAHAYYGATEGQFGFMLETHQQRAQGFKDIDRSNRDSGFDKRDYVAKLRWQAPETADIQQAFEL KLEHSSEVSDETYLGLTDRDFENDANRRYGMSDIDQMDNDRDAVSLRHTLVFDENTQLNSVVYRNEFNRNWYKLASIGGQ SIGGFVADANANGGTKQAVLSGAADATDLVFKNNNREYISEGVQTELNHRFQTGSVDNDLIVGARYHQDEVDRYQPTDTF DQVNGSLVYQSSTLPTGGDNRLENADAVSAWIIDHAYVGDFIVTGSLRYENVESKSKRWGDPARNTVSSRTENRNEELMA GLGATWLLNDNWSLLAGVHQGFAPAGASSQKGTDAEKSVNYETGFRYWQENFSADVIAFYSDYENTIQNCSIANPCPNGN DFGTQSFGESEVRGLEVGLSSVIWEGDTGLRAPVRLAYTYTDGEITKDADDLSVLEGDVLPYLPEHLASLTFGLEKPAAW SALMSVSHTDGMCIDNSCDRPGEVTTFKRTSDYVIADIVATYQVNSDMEVYVKVDNVFDDQEIVSRDPAGARPNKPRTGY VGMKVHF >Mature_727_residues MYLQRRLLCCAIASAMAAPAFADQANELKPVQIIGDRQSTFSISGSAHVLSNEDLEEKENTDVHRMLRDVPGVYFQEEDG YGLRPNIGIRGSGRDRSSKISLMEDGVLIAPAPYAAPAAYYFPSAGRFYGVEVLKGPDTLRYGPFTVGGSINFLSTPIPA RASGMVNVEGGEDGSQRAHAYYGATEGQFGFMLETHQQRAQGFKDIDRSNRDSGFDKRDYVAKLRWQAPETADIQQAFEL KLEHSSEVSDETYLGLTDRDFENDANRRYGMSDIDQMDNDRDAVSLRHTLVFDENTQLNSVVYRNEFNRNWYKLASIGGQ SIGGFVADANANGGTKQAVLSGAADATDLVFKNNNREYISEGVQTELNHRFQTGSVDNDLIVGARYHQDEVDRYQPTDTF DQVNGSLVYQSSTLPTGGDNRLENADAVSAWIIDHAYVGDFIVTGSLRYENVESKSKRWGDPARNTVSSRTENRNEELMA GLGATWLLNDNWSLLAGVHQGFAPAGASSQKGTDAEKSVNYETGFRYWQENFSADVIAFYSDYENTIQNCSIANPCPNGN DFGTQSFGESEVRGLEVGLSSVIWEGDTGLRAPVRLAYTYTDGEITKDADDLSVLEGDVLPYLPEHLASLTFGLEKPAAW SALMSVSHTDGMCIDNSCDRPGEVTTFKRTSDYVIADIVATYQVNSDMEVYVKVDNVFDDQEIVSRDPAGARPNKPRTGY VGMKVHF
Specific function: FecA is the outer membrane receptor protein in the Fe(3+) dicitrate transport system [H]
COG id: COG4772
COG function: function code P; Outer membrane receptor for Fe3+-dicitrate
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1790743, Length=752, Percent_Identity=23.6702127659574, Blast_Score=106, Evalue=6e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR011662 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF07660 STN; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 80238; Mature: 80238
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYLQRRLLCCAIASAMAAPAFADQANELKPVQIIGDRQSTFSISGSAHVLSNEDLEEKEN CCHHHHHHHHHHHHHHHCCHHHHCCCCCCCEEEECCCCCEEEECCCEEEECCCCCCHHCC TDVHRMLRDVPGVYFQEEDGYGLRPNIGIRGSGRDRSSKISLMEDGVLIAPAPYAAPAAY CHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEECCCCCCCCEE YFPSAGRFYGVEVLKGPDTLRYGPFTVGGSINFLSTPIPARASGMVNVEGGEDGSQRAHA ECCCCCCEEEEEEECCCCCEEECCEEECCCCEEECCCCCCCCCCEEEECCCCCCCCCEEE YYGATEGQFGFMLETHQQRAQGFKDIDRSNRDSGFDKRDYVAKLRWQAPETADIQQAFEL EECCCCCCEEEEEHHHHHHHCCHHHHHCCCCCCCCCHHHHHHHEEECCCCCHHHHHHHHH KLEHSSEVSDETYLGLTDRDFENDANRRYGMSDIDQMDNDRDAVSLRHTLVFDENTQLNS HCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEEEEEEECCCCCCCE VVYRNEFNRNWYKLASIGGQSIGGFVADANANGGTKQAVLSGAADATDLVFKNNNREYIS EEEECCCCCCEEEEECCCCCCCCCEEEECCCCCCCHHHHHCCCCCCEEEEEECCCHHHHH EGVQTELNHRFQTGSVDNDLIVGARYHQDEVDRYQPTDTFDQVNGSLVYQSSTLPTGGDN HHHHHHHHCCEECCCCCCCEEEEEECCHHHHHCCCCCCHHHHCCCEEEEECCCCCCCCCC RLENADAVSAWIIDHAYVGDFIVTGSLRYENVESKSKRWGDPARNTVSSRTENRNEELMA CCCCCHHHHHHHHHHHHHCCEEEECCEEECCCHHHHHHCCCHHHHHHHHHHCCCCHHHHH GLGATWLLNDNWSLLAGVHQGFAPAGASSQKGTDAEKSVNYETGFRYWQENFSADVIAFY CCCEEEEECCCCCEEHHHHHCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHCCCCEEEEEE SDYENTIQNCSIANPCPNGNDFGTQSFGESEVRGLEVGLSSVIWEGDTGLRAPVRLAYTY HHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHEEECCCCCCCCCEEEEEEE TDGEITKDADDLSVLEGDVLPYLPEHLASLTFGLEKPAAWSALMSVSHTDGMCIDNSCDR ECCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEECCCCCC PGEVTTFKRTSDYVIADIVATYQVNSDMEVYVKVDNVFDDQEIVSRDPAGARPNKPRTGY CCCEEEEECCCCEEEEEEEEEEEECCCCEEEEEECCCCCCHHHHHCCCCCCCCCCCCCCE VGMKVHF EEEEEEC >Mature Secondary Structure MYLQRRLLCCAIASAMAAPAFADQANELKPVQIIGDRQSTFSISGSAHVLSNEDLEEKEN CCHHHHHHHHHHHHHHHCCHHHHCCCCCCCEEEECCCCCEEEECCCEEEECCCCCCHHCC TDVHRMLRDVPGVYFQEEDGYGLRPNIGIRGSGRDRSSKISLMEDGVLIAPAPYAAPAAY CHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEECCCCCCCCEE YFPSAGRFYGVEVLKGPDTLRYGPFTVGGSINFLSTPIPARASGMVNVEGGEDGSQRAHA ECCCCCCEEEEEEECCCCCEEECCEEECCCCEEECCCCCCCCCCEEEECCCCCCCCCEEE YYGATEGQFGFMLETHQQRAQGFKDIDRSNRDSGFDKRDYVAKLRWQAPETADIQQAFEL EECCCCCCEEEEEHHHHHHHCCHHHHHCCCCCCCCCHHHHHHHEEECCCCCHHHHHHHHH KLEHSSEVSDETYLGLTDRDFENDANRRYGMSDIDQMDNDRDAVSLRHTLVFDENTQLNS HCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEEEEEEECCCCCCCE VVYRNEFNRNWYKLASIGGQSIGGFVADANANGGTKQAVLSGAADATDLVFKNNNREYIS EEEECCCCCCEEEEECCCCCCCCCEEEECCCCCCCHHHHHCCCCCCEEEEEECCCHHHHH EGVQTELNHRFQTGSVDNDLIVGARYHQDEVDRYQPTDTFDQVNGSLVYQSSTLPTGGDN HHHHHHHHCCEECCCCCCCEEEEEECCHHHHHCCCCCCHHHHCCCEEEEECCCCCCCCCC RLENADAVSAWIIDHAYVGDFIVTGSLRYENVESKSKRWGDPARNTVSSRTENRNEELMA CCCCCHHHHHHHHHHHHHCCEEEECCEEECCCHHHHHHCCCHHHHHHHHHHCCCCHHHHH GLGATWLLNDNWSLLAGVHQGFAPAGASSQKGTDAEKSVNYETGFRYWQENFSADVIAFY CCCEEEEECCCCCEEHHHHHCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHCCCCEEEEEE SDYENTIQNCSIANPCPNGNDFGTQSFGESEVRGLEVGLSSVIWEGDTGLRAPVRLAYTY HHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHEEECCCCCCCCCEEEEEEE TDGEITKDADDLSVLEGDVLPYLPEHLASLTFGLEKPAAWSALMSVSHTDGMCIDNSCDR ECCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEECCCCCC PGEVTTFKRTSDYVIADIVATYQVNSDMEVYVKVDNVFDDQEIVSRDPAGARPNKPRTGY CCCEEEEECCCCEEEEEEEEEEEECCCCEEEEEECCCCCCHHHHHCCCCCCCCCCCCCCE VGMKVHF EEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2836368; 7610040; 9278503; 2254251; 2651410 [H]