| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is hyuB
Identifier: 110833581
GI number: 110833581
Start: 809277
End: 810770
Strand: Direct
Name: hyuB
Synonym: ABO_0720
Alternate gene names: NA
Gene position: 809277-810770 (Clockwise)
Preceding gene: 110833577
Following gene: 110833582
Centisome position: 25.94
GC content: 60.17
Gene sequence:
>1494_bases ATGGGTGCGGTATTGCGCCTGAGTGCGCTGTCCCCGAACATCAAGGACCGACTCGACTTTTCCTGTGCTATTTTTGATGC CCAAGGTCGGCTGTGCGCCCAGGCGGCCCATATCCCGGTGCATCTTGGGTCCATGGCTTATGCCATGGCGGATCTGGTCA CGGGCAGAGAGTGGCAGGCAGAAGATCTGATGGTGGTGAATGATCCCTATTTGGGTGGCACGCATTTGCCGGATGTAACG GTGGTTGCGCCGGTATTTCAGTCGCAGACCCTAATGGGCTTCACTGTGACCCGGGCCCACCATGCGAATATTGGTGCCCA CAGCCCTGGATCCATGCCGGTATCTACCCATCTGGAGCAAGAAGGGATTGTTATTGCTCCCAGTTGGCTAAAACGCGCAG GGCAATGGCAGGTGCCTTTGTGCCGGCGCCTAGCCGGGCTGGAGGAGCACGGGACGTTGCCGGTAGAGACTCCGCGTTTT GCCGACTTTTCTGCCCAGGCTAGTGCCTGTGAGGCGGGTGCCCGGCGTTTGGCGGAGCTGGCCGATCAGCAATTTGATCT GGTGGCGGCCTTTGATGCCCTCAATGCGTATGGTGAAAAGCGTGCTCGCGCTCGCATCGCGACCCTGCCGGATGGTTGTT ACCGGTTCCAGGATTACATGGACGACGATGGCCAAGGCCAGCAGGGCATCCTCATTACCGTCAGCCTCACGATTTGCGGA GATCAGGCCTCTCTGGATTTTAGTGGCACGGCAGATCAGGTGGCGGGAAATATCAATTGCCCGTTGTCCGTGGCAGCCGC AGCGGTCTATTACTGCTTTCGCTGCTTGATGGACGATGACGTGCCTGCCTGCGATGGTCTCTTTCGGCCTATAAAGCTGT CCGCTCCGCCAGGCTCGTTGCTCAATGCCCGCCGCCCGGCGGCGGTGGCTGCCGGCAATGTGGAAACCAGTTCACGGGTG GTGGATGTGGTGCTGGGTGCGCTGGCTCAGGCGGCGCCGGAGGCAATTCCCGCAGCCAGTCAGGGAACCATGAATAATGT GGCTATGGGCGCTGGCGGTGACAATGGCTGGGATTATTACGAAACCATGGCCGGTGGTACGGGCGCTCATGCTGGTGGCC CTGGGCTGTCGGCGGTGCACAGTCATATGACTAATACTCTTAATACGCCAGTCGAAAGCCTTGAGTCTCACTATCCGCTG AGGGTGCACCGTTATCAATTGCGCAGGGGCAGTGGGGGGAGTGGGCAGTTTATGGGGGGCGAGGGCTTGGTCCGTGAGTT GGAGTTCTTGGCTGATGCCCAGGTCACCCTGCTTACTGAGCGTCGCCTTTTCGCTCCCTGGGGGCTGGCCGGCGGGCAGA GTGGAGCGGTGGGGGAAAACCGCCATAACGGCCGGTTGTTGCCACCGAAAGCTAGCTTCACCGCTCGCCCCGGTGATCGG TTGTTAGTGGCTTCACCCGGCGGTGGCGGGTATCGCGGCAGGGAATGCAAATGA
Upstream 100 bases:
>100_bases GATTTTCGCTATCAACTATTCATTATTGACTGCCTATTGCCCTATGAATCCTGTCCAGCTGAGTATTTTTGCCAACCGCC TTGGCGGTATCTGTGAGGAA
Downstream 100 bases:
>100_bases GAACTATAGCATATTGATATTGATTCTTTTTCGTTATATCTTCTGCGCGCTTACATTATTTACATTTGCGTCGGGAAGGG AAAAGTCATGTATTTGCAGC
Product: N-methylhydantoinase B
Products: ADP; phosphate; N-carbamoylsarcosine
Alternate protein names: NA
Number of amino acids: Translated: 497; Mature: 496
Protein sequence:
>497_residues MGAVLRLSALSPNIKDRLDFSCAIFDAQGRLCAQAAHIPVHLGSMAYAMADLVTGREWQAEDLMVVNDPYLGGTHLPDVT VVAPVFQSQTLMGFTVTRAHHANIGAHSPGSMPVSTHLEQEGIVIAPSWLKRAGQWQVPLCRRLAGLEEHGTLPVETPRF ADFSAQASACEAGARRLAELADQQFDLVAAFDALNAYGEKRARARIATLPDGCYRFQDYMDDDGQGQQGILITVSLTICG DQASLDFSGTADQVAGNINCPLSVAAAAVYYCFRCLMDDDVPACDGLFRPIKLSAPPGSLLNARRPAAVAAGNVETSSRV VDVVLGALAQAAPEAIPAASQGTMNNVAMGAGGDNGWDYYETMAGGTGAHAGGPGLSAVHSHMTNTLNTPVESLESHYPL RVHRYQLRRGSGGSGQFMGGEGLVRELEFLADAQVTLLTERRLFAPWGLAGGQSGAVGENRHNGRLLPPKASFTARPGDR LLVASPGGGGYRGRECK
Sequences:
>Translated_497_residues MGAVLRLSALSPNIKDRLDFSCAIFDAQGRLCAQAAHIPVHLGSMAYAMADLVTGREWQAEDLMVVNDPYLGGTHLPDVT VVAPVFQSQTLMGFTVTRAHHANIGAHSPGSMPVSTHLEQEGIVIAPSWLKRAGQWQVPLCRRLAGLEEHGTLPVETPRF ADFSAQASACEAGARRLAELADQQFDLVAAFDALNAYGEKRARARIATLPDGCYRFQDYMDDDGQGQQGILITVSLTICG DQASLDFSGTADQVAGNINCPLSVAAAAVYYCFRCLMDDDVPACDGLFRPIKLSAPPGSLLNARRPAAVAAGNVETSSRV VDVVLGALAQAAPEAIPAASQGTMNNVAMGAGGDNGWDYYETMAGGTGAHAGGPGLSAVHSHMTNTLNTPVESLESHYPL RVHRYQLRRGSGGSGQFMGGEGLVRELEFLADAQVTLLTERRLFAPWGLAGGQSGAVGENRHNGRLLPPKASFTARPGDR LLVASPGGGGYRGRECK >Mature_496_residues GAVLRLSALSPNIKDRLDFSCAIFDAQGRLCAQAAHIPVHLGSMAYAMADLVTGREWQAEDLMVVNDPYLGGTHLPDVTV VAPVFQSQTLMGFTVTRAHHANIGAHSPGSMPVSTHLEQEGIVIAPSWLKRAGQWQVPLCRRLAGLEEHGTLPVETPRFA DFSAQASACEAGARRLAELADQQFDLVAAFDALNAYGEKRARARIATLPDGCYRFQDYMDDDGQGQQGILITVSLTICGD QASLDFSGTADQVAGNINCPLSVAAAAVYYCFRCLMDDDVPACDGLFRPIKLSAPPGSLLNARRPAAVAAGNVETSSRVV DVVLGALAQAAPEAIPAASQGTMNNVAMGAGGDNGWDYYETMAGGTGAHAGGPGLSAVHSHMTNTLNTPVESLESHYPLR VHRYQLRRGSGGSGQFMGGEGLVRELEFLADAQVTLLTERRLFAPWGLAGGQSGAVGENRHNGRLLPPKASFTARPGDRL LVASPGGGGYRGRECK
Specific function: Unknown
COG id: COG0146
COG function: function code EQ; N-methylhydantoinase B/acetone carboxylase, alpha subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oxoprolinase family [H]
Homologues:
Organism=Homo sapiens, GI48314820, Length=528, Percent_Identity=42.4242424242424, Blast_Score=311, Evalue=7e-85, Organism=Caenorhabditis elegans, GI133901900, Length=523, Percent_Identity=39.3881453154876, Blast_Score=312, Evalue=3e-85, Organism=Caenorhabditis elegans, GI133901902, Length=511, Percent_Identity=38.747553816047, Blast_Score=295, Evalue=5e-80, Organism=Saccharomyces cerevisiae, GI6322634, Length=533, Percent_Identity=37.7110694183865, Blast_Score=335, Evalue=8e-93, Organism=Drosophila melanogaster, GI45550492, Length=523, Percent_Identity=39.5793499043977, Blast_Score=298, Evalue=5e-81,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003692 [H]
Pfam domain/function: PF02538 Hydantoinase_B [H]
EC number: 3.5.2.14
Molecular weight: Translated: 52523; Mature: 52392
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAVLRLSALSPNIKDRLDFSCAIFDAQGRLCAQAAHIPVHLGSMAYAMADLVTGREWQA CCCEEEEECCCCCHHHHCCEEEEEECCCCCHHHHHCCCCEEHHHHHHHHHHHHCCCCCCC EDLMVVNDPYLGGTHLPDVTVVAPVFQSQTLMGFTVTRAHHANIGAHSPGSMPVSTHLEQ CCEEEEECCCCCCCCCCCCEEEEHHHCCCEEEEEEEEEECCCCCCCCCCCCCCHHHCCCC EGIVIAPSWLKRAGQWQVPLCRRLAGLEEHGTLPVETPRFADFSAQASACEAGARRLAEL CCEEECCHHHHCCCCCCCHHHHHHCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH ADQQFDLVAAFDALNAYGEKRARARIATLPDGCYRFQDYMDDDGQGQQGILITVSLTICG HHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHCCCCCCCCCCEEEEEEEEEEC DQASLDFSGTADQVAGNINCPLSVAAAAVYYCFRCLMDDDVPACDGLFRPIKLSAPPGSL CCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCHH LNARRPAAVAAGNVETSSRVVDVVLGALAQAAPEAIPAASQGTMNNVAMGAGGDNGWDYY HCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCCEEECCCCCCCCHHH ETMAGGTGAHAGGPGLSAVHSHMTNTLNTPVESLESHYPLRVHRYQLRRGSGGSGQFMGG HHHCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHCCCCEEEEEEEECCCCCCCCCEECC EGLVRELEFLADAQVTLLTERRLFAPWGLAGGQSGAVGENRHNGRLLPPKASFTARPGDR HHHHHHHHHHHCCEEEEEECCCEECCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCE LLVASPGGGGYRGRECK EEEECCCCCCCCCCCCC >Mature Secondary Structure GAVLRLSALSPNIKDRLDFSCAIFDAQGRLCAQAAHIPVHLGSMAYAMADLVTGREWQA CCEEEEECCCCCHHHHCCEEEEEECCCCCHHHHHCCCCEEHHHHHHHHHHHHCCCCCCC EDLMVVNDPYLGGTHLPDVTVVAPVFQSQTLMGFTVTRAHHANIGAHSPGSMPVSTHLEQ CCEEEEECCCCCCCCCCCCEEEEHHHCCCEEEEEEEEEECCCCCCCCCCCCCCHHHCCCC EGIVIAPSWLKRAGQWQVPLCRRLAGLEEHGTLPVETPRFADFSAQASACEAGARRLAEL CCEEECCHHHHCCCCCCCHHHHHHCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH ADQQFDLVAAFDALNAYGEKRARARIATLPDGCYRFQDYMDDDGQGQQGILITVSLTICG HHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHCCCCCCCCCCEEEEEEEEEEC DQASLDFSGTADQVAGNINCPLSVAAAAVYYCFRCLMDDDVPACDGLFRPIKLSAPPGSL CCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCHH LNARRPAAVAAGNVETSSRVVDVVLGALAQAAPEAIPAASQGTMNNVAMGAGGDNGWDYY HCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCCEEECCCCCCCCHHH ETMAGGTGAHAGGPGLSAVHSHMTNTLNTPVESLESHYPLRVHRYQLRRGSGGSGQFMGG HHHCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHCCCCEEEEEEEECCCCCCCCCEECC EGLVRELEFLADAQVTLLTERRLFAPWGLAGGQSGAVGENRHNGRLLPPKASFTARPGDR HHHHHHHHHHHCCEEEEEECCCEECCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCE LLVASPGGGGYRGRECK EEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; N-methylimidazolidine-2,4-dione; H2O
Specific reaction: ATP + N-methylimidazolidine-2,4-dione + 2 H2O = ADP + phosphate + N-carbamoylsarcosine
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]