| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is ampE
Identifier: 110833482
GI number: 110833482
Start: 683505
End: 684353
Strand: Direct
Name: ampE
Synonym: ABO_0621
Alternate gene names: NA
Gene position: 683505-684353 (Clockwise)
Preceding gene: 110833481
Following gene: 110833483
Centisome position: 21.91
GC content: 55.48
Gene sequence:
>849_bases ATGAAGTTTATCGTTCTTATTGTGGTTATGGGGTTGCGACGGATGGACCTTGGTTGGTCTACATTGCTGGCAGATGATGA ACGGCATCAGCGTTGGTTGCAGCGATGCGGCAGCCGCATTGGCCAGCCGGCTCGTGTTTGGTGGGTTGCGGTGCTGTTGC CTGCTGTGCTGATTGCTTGGGCTGCATGCTGGTTATCAGGTTTCTGGGGCCAGCTGCTCGTCTTGGGGCTGGGCATCCTG TTGTTGCTTTGGTTGCTTGGCAGTTACAGTGAATTTCGTTATGTGGATGAGCTACTGGTGCGCGGTCGCATGAATGATCC AGATGGCTTTTCGGCCTTGGCTACTGACGAATTTTCCGTGACTGGGGTGCCCGGTGATCCGGCCTACCACCAGCAATTGA ATGAGCAGATCTTGGCGCGTGAGGAGCGGCTGTTCGTGGCGATTTTCTGGCTGGTTTTGTTAGGCTTTGGTGCCGCGTTC TTGGTGGTGATGAATCATGCCTGGTTACAACATAAGAGACGACATGGCAGAGAAGAAGATGCTCCAGTCTGGCAACAGAC ACTGGATAACTGGTTGAGCCTTCCACCCCGGCAGTTGCTAATCCTCAGCATGGCCCTGGCGGGTAACTTCAGTGCGGCGA TGAACCGTATGCGTGGTAGTTGGTGGCAGTTGCCTCCGTCTGCTTCGCTGCTTCTGTCTGTGGCTCATGTGGCGCAGGAA GAAAGCTCTGAGGCCTGCCCCGCCACGCTGAACATTGCGTTGGATCAGCTGGAAGCGCTGCACGGTTTGCTGCTGCGCTG TGTCGCCATCTGGCTGATTGTGGCCGCTCTGTGGATTATGCTGCTATGA
Upstream 100 bases:
>100_bases GCCATGAGCACATTGCGCCGGGAAGAAAAACGGATCCGGGCCCTGCCTTCGACTGGTTGCGTTATCGTCAGGAATTAGCC AATTTTAAGGAGAAAAGAGC
Downstream 100 bases:
>100_bases GAATGGCAAGCAGGACCCTGTTTCTCAAGAGCCCCTATGGGAAGGGAAAAAGGGTCCAAAATAACCGACATTGGTCGAAT TTACGTTTGCTGGCGCCGGG
Product: inner membrane protein AmpE
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 282; Mature: 282
Protein sequence:
>282_residues MKFIVLIVVMGLRRMDLGWSTLLADDERHQRWLQRCGSRIGQPARVWWVAVLLPAVLIAWAACWLSGFWGQLLVLGLGIL LLLWLLGSYSEFRYVDELLVRGRMNDPDGFSALATDEFSVTGVPGDPAYHQQLNEQILAREERLFVAIFWLVLLGFGAAF LVVMNHAWLQHKRRHGREEDAPVWQQTLDNWLSLPPRQLLILSMALAGNFSAAMNRMRGSWWQLPPSASLLLSVAHVAQE ESSEACPATLNIALDQLEALHGLLLRCVAIWLIVAALWIMLL
Sequences:
>Translated_282_residues MKFIVLIVVMGLRRMDLGWSTLLADDERHQRWLQRCGSRIGQPARVWWVAVLLPAVLIAWAACWLSGFWGQLLVLGLGIL LLLWLLGSYSEFRYVDELLVRGRMNDPDGFSALATDEFSVTGVPGDPAYHQQLNEQILAREERLFVAIFWLVLLGFGAAF LVVMNHAWLQHKRRHGREEDAPVWQQTLDNWLSLPPRQLLILSMALAGNFSAAMNRMRGSWWQLPPSASLLLSVAHVAQE ESSEACPATLNIALDQLEALHGLLLRCVAIWLIVAALWIMLL >Mature_282_residues MKFIVLIVVMGLRRMDLGWSTLLADDERHQRWLQRCGSRIGQPARVWWVAVLLPAVLIAWAACWLSGFWGQLLVLGLGIL LLLWLLGSYSEFRYVDELLVRGRMNDPDGFSALATDEFSVTGVPGDPAYHQQLNEQILAREERLFVAIFWLVLLGFGAAF LVVMNHAWLQHKRRHGREEDAPVWQQTLDNWLSLPPRQLLILSMALAGNFSAAMNRMRGSWWQLPPSASLLLSVAHVAQE ESSEACPATLNIALDQLEALHGLLLRCVAIWLIVAALWIMLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31894; Mature: 31894
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFIVLIVVMGLRRMDLGWSTLLADDERHQRWLQRCGSRIGQPARVWWVAVLLPAVLIAW CHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH AACWLSGFWGQLLVLGLGILLLLWLLGSYSEFRYVDELLVRGRMNDPDGFSALATDEFSV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHCCCCCEE TGVPGDPAYHQQLNEQILAREERLFVAIFWLVLLGFGAAFLVVMNHAWLQHKRRHGREED ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC APVWQQTLDNWLSLPPRQLLILSMALAGNFSAAMNRMRGSWWQLPPSASLLLSVAHVAQE CCHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH ESSEACPATLNIALDQLEALHGLLLRCVAIWLIVAALWIMLL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MKFIVLIVVMGLRRMDLGWSTLLADDERHQRWLQRCGSRIGQPARVWWVAVLLPAVLIAW CHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH AACWLSGFWGQLLVLGLGILLLLWLLGSYSEFRYVDELLVRGRMNDPDGFSALATDEFSV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHCCCCCEE TGVPGDPAYHQQLNEQILAREERLFVAIFWLVLLGFGAAFLVVMNHAWLQHKRRHGREED ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC APVWQQTLDNWLSLPPRQLLILSMALAGNFSAAMNRMRGSWWQLPPSASLLLSVAHVAQE CCHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH ESSEACPATLNIALDQLEALHGLLLRCVAIWLIVAALWIMLL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA