Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is 110681041

Identifier: 110681041

GI number: 110681041

Start: 3770510

End: 3770734

Strand: Direct

Name: 110681041

Synonym: RD1_3904

Alternate gene names: NA

Gene position: 3770510-3770734 (Clockwise)

Preceding gene: 110681040

Following gene: 110681042

Centisome position: 91.23

GC content: 59.56

Gene sequence:

>225_bases
ATGGAAAAAGATGACAGCATCAACGTATTGGGCGAACCGCTCGTGATCTGCGGCACCGACCCGGTCACGGGGTTCTTTCG
CGACGGGTATTGCAACACCTGTGCTGCCGATCAGGGCAGCCACACGGTCTGCGCCGTGATGACGGCGGAGTTCCTCGCGT
TTTCCAAATACCTCGGCAACGACCTCAGCACTCCGCGCCCCGAAGTATGGGTTTGCAGGGCTTGA

Upstream 100 bases:

>100_bases
GCGCTGACAGCAGCGGATGCCGCGTTTCGCGATGCGGACGTGCAGCAACAGAACATCGCGCTGTTTCGTGAGATAGCCGA
TCGTGTGCAAGGAGATGCAA

Downstream 100 bases:

>100_bases
AACCCGGGCGATACATGGTGCCTCTGTGCGAGCCGGTTTTACAGGCCCACACCGAGGGGCTGCGCACCACGGATCAGCCT
TCGAGGCGACGCATAGAGGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 74; Mature: 74

Protein sequence:

>74_residues
MEKDDSINVLGEPLVICGTDPVTGFFRDGYCNTCAADQGSHTVCAVMTAEFLAFSKYLGNDLSTPRPEVWVCRA

Sequences:

>Translated_74_residues
MEKDDSINVLGEPLVICGTDPVTGFFRDGYCNTCAADQGSHTVCAVMTAEFLAFSKYLGNDLSTPRPEVWVCRA
>Mature_74_residues
MEKDDSINVLGEPLVICGTDPVTGFFRDGYCNTCAADQGSHTVCAVMTAEFLAFSKYLGNDLSTPRPEVWVCRA

Specific function: Unknown

COG id: COG3651

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8035; Mature: 8035

Theoretical pI: Translated: 4.19; Mature: 4.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
9.5 %Cys+Met (Translated Protein)
6.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
9.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKDDSINVLGEPLVICGTDPVTGFFRDGYCNTCAADQGSHTVCAVMTAEFLAFSKYLGN
CCCCCCCEECCCCEEEECCCCCCCEECCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCC
DLSTPRPEVWVCRA
CCCCCCCCEEEECC
>Mature Secondary Structure
MEKDDSINVLGEPLVICGTDPVTGFFRDGYCNTCAADQGSHTVCAVMTAEFLAFSKYLGN
CCCCCCCEECCCCEEEECCCCCCCEECCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCC
DLSTPRPEVWVCRA
CCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA