Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is 110681011

Identifier: 110681011

GI number: 110681011

Start: 3741118

End: 3742131

Strand: Direct

Name: 110681011

Synonym: RD1_3870

Alternate gene names: NA

Gene position: 3741118-3742131 (Clockwise)

Preceding gene: 110681009

Following gene: 110681012

Centisome position: 90.52

GC content: 63.02

Gene sequence:

>1014_bases
ATGAAACGTATCGCACTCTTGTCGCTTTTGTCCTTGTCGCACGCATATGCCGCCGCGGCGGATATGCTGCCCGGTTATGA
CCGGTTTGATCTGTTCGCGGCCCATCGCGCGACCCCGGTTGCAGCGTCGATCTGGTATCCTGCGGCCAATCCAACCTACC
GCGCCCCTGTCGGGGACGGCCCGATTTTCGAGCCGAGCTTTGCCTTTATTGGTCCTGCGGTTGCGCAGGGCCAACACCCG
CTTGTCCTGCTGTCCCACGGGTCGGGCGGCAATGCGCAAACGCTGGGCTGGCTGGCAAGCGGTCTGGTGGATCGCGGGGC
GATGGTGCTTGCGGTCAATCATCCCGGCTCCACCAGCGGGGACAGCTCACCGCGCCGCTCTGTCGATCTTGAAGCGCGTG
CCTCCGATCTGTCGGCAGCGCTGGACATGATCCTTGCGGATCCTGCCTTCGCGCGCCACATCGACCGGGACAGGATCAGC
ACCGTTGGTTTCTCGCTTGGGGGGGCGACGTCGCTTGGGCTGGCCGGGGTGCGATTCATCGGCGCATGGCAGGATGAAAA
CTGCGCAACGGAGCCAGAGGCCGCCGATTGCACCTTTTTCCAGCTCGGGGGTGTGCGGTTTGCCGACTATCCCGGCTTTG
ACGCAGATACCCGCGACCGGCGCATCAGCGGCGCGGTGATCATCGACCCGGGGTTTGGCGGCTCCGCTGACCCTGCCAGC
CTCGCCACTGCGCTGCCCGGCATCACGTTGATCAATCTGGGCGATGCGGATCGTCTGGCGGCGGCCGATGTAGGGCCAAA
TGGCAATGATCTGGCCCGACGCTTGCCCGATGCCCGTTACATCGAAATCGCTTCAGCGCATCATTTCACCTTTTTGAGCA
CCTGCAAAACGGGGGCCGTCCAAATGCTGGAAGAGGAAGGAGAAGACCCGATCTGCACAGACCCTGCCGGAGTTGACCGC
GCAGCAACACATGCGCTTTTGATCGACGCAATTGCCGACGGGCTTGGATACTGA

Upstream 100 bases:

>100_bases
TCCGAAATCCGGATCATGGCGACCTCAATCCCGAATATAGGACGCGGGCCGAGCGCGATCTGGCGCATCAGGGCAACAAC
GTTCATCAACGGAGGTTCCC

Downstream 100 bases:

>100_bases
CCCAAATACTGGAATGAAATACGGCAGTCTTGCGCCGGGGATTGTCCCGGCGATGGCACTCATTTCCGGTCAGGATCGCG
GGCTTTTGACCGCTCTCATC

Product: hypothetical protein

Products: NA

Alternate protein names: Dienelactone Hydrolase; Alpha/Beta Hydrolase; Dienelactone Hydrolase Protein; Hydrolase Putative Exported Protein; Lipoprotein

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MKRIALLSLLSLSHAYAAAADMLPGYDRFDLFAAHRATPVAASIWYPAANPTYRAPVGDGPIFEPSFAFIGPAVAQGQHP
LVLLSHGSGGNAQTLGWLASGLVDRGAMVLAVNHPGSTSGDSSPRRSVDLEARASDLSAALDMILADPAFARHIDRDRIS
TVGFSLGGATSLGLAGVRFIGAWQDENCATEPEAADCTFFQLGGVRFADYPGFDADTRDRRISGAVIIDPGFGGSADPAS
LATALPGITLINLGDADRLAAADVGPNGNDLARRLPDARYIEIASAHHFTFLSTCKTGAVQMLEEEGEDPICTDPAGVDR
AATHALLIDAIADGLGY

Sequences:

>Translated_337_residues
MKRIALLSLLSLSHAYAAAADMLPGYDRFDLFAAHRATPVAASIWYPAANPTYRAPVGDGPIFEPSFAFIGPAVAQGQHP
LVLLSHGSGGNAQTLGWLASGLVDRGAMVLAVNHPGSTSGDSSPRRSVDLEARASDLSAALDMILADPAFARHIDRDRIS
TVGFSLGGATSLGLAGVRFIGAWQDENCATEPEAADCTFFQLGGVRFADYPGFDADTRDRRISGAVIIDPGFGGSADPAS
LATALPGITLINLGDADRLAAADVGPNGNDLARRLPDARYIEIASAHHFTFLSTCKTGAVQMLEEEGEDPICTDPAGVDR
AATHALLIDAIADGLGY
>Mature_337_residues
MKRIALLSLLSLSHAYAAAADMLPGYDRFDLFAAHRATPVAASIWYPAANPTYRAPVGDGPIFEPSFAFIGPAVAQGQHP
LVLLSHGSGGNAQTLGWLASGLVDRGAMVLAVNHPGSTSGDSSPRRSVDLEARASDLSAALDMILADPAFARHIDRDRIS
TVGFSLGGATSLGLAGVRFIGAWQDENCATEPEAADCTFFQLGGVRFADYPGFDADTRDRRISGAVIIDPGFGGSADPAS
LATALPGITLINLGDADRLAAADVGPNGNDLARRLPDARYIEIASAHHFTFLSTCKTGAVQMLEEEGEDPICTDPAGVDR
AATHALLIDAIADGLGY

Specific function: Unknown

COG id: COG4188

COG function: function code R; Predicted dienelactone hydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35086; Mature: 35086

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRIALLSLLSLSHAYAAAADMLPGYDRFDLFAAHRATPVAASIWYPAANPTYRAPVGDG
CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEECCCCCCCEECCCCCC
PIFEPSFAFIGPAVAQGQHPLVLLSHGSGGNAQTLGWLASGLVDRGAMVLAVNHPGSTSG
CCCCCCHHHHCHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCC
DSSPRRSVDLEARASDLSAALDMILADPAFARHIDRDRISTVGFSLGGATSLGLAGVRFI
CCCCCCCEEHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHCEECCCCCHHHHHHEEEE
GAWQDENCATEPEAADCTFFQLGGVRFADYPGFDADTRDRRISGAVIIDPGFGGSADPAS
ECCCCCCCCCCCCCCCEEEEEECCEEEECCCCCCCCCCCCEECCEEEECCCCCCCCCHHH
LATALPGITLINLGDADRLAAADVGPNGNDLARRLPDARYIEIASAHHFTFLSTCKTGAV
HHHHCCCEEEEECCCCCCEEEECCCCCCHHHHHHCCCCEEEEEECCCCEEHHHHHHHHHH
QMLEEEGEDPICTDPAGVDRAATHALLIDAIADGLGY
HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKRIALLSLLSLSHAYAAAADMLPGYDRFDLFAAHRATPVAASIWYPAANPTYRAPVGDG
CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEECCCCCCCEECCCCCC
PIFEPSFAFIGPAVAQGQHPLVLLSHGSGGNAQTLGWLASGLVDRGAMVLAVNHPGSTSG
CCCCCCHHHHCHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCC
DSSPRRSVDLEARASDLSAALDMILADPAFARHIDRDRISTVGFSLGGATSLGLAGVRFI
CCCCCCCEEHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHCEECCCCCHHHHHHEEEE
GAWQDENCATEPEAADCTFFQLGGVRFADYPGFDADTRDRRISGAVIIDPGFGGSADPAS
ECCCCCCCCCCCCCCCEEEEEECCEEEECCCCCCCCCCCCEECCEEEECCCCCCCCCHHH
LATALPGITLINLGDADRLAAADVGPNGNDLARRLPDARYIEIASAHHFTFLSTCKTGAV
HHHHCCCEEEEECCCCCCEEEECCCCCCHHHHHHCCCCEEEEEECCCCEEHHHHHHHHHH
QMLEEEGEDPICTDPAGVDRAATHALLIDAIADGLGY
HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA