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The map label for this gene is 110680985

Identifier: 110680985

GI number: 110680985

Start: 3715550

End: 3716749

Strand: Direct

Name: 110680985

Synonym: RD1_3844

Alternate gene names: NA

Gene position: 3715550-3716749 (Clockwise)

Preceding gene: 110680983

Following gene: 110680986

Centisome position: 89.9

GC content: 59.58

Gene sequence:

>1200_bases
ATGGATTCCAGCCTCAATACAGCGGAAATGCGCCTGCATGTGGCCTTTGCCAAAGTGGGCTTTACGCAAGACGAACAGCG
GGCGGCCGAATCGCTGGCGCGGCAGGTCACCGACTGGGACGGTTTCGTGGCAACGGCGATGCGCAATTTCAGCCTGCCCA
ACATGCGCATGCACCTCAGTCGCATGACCCCGGATTGCGTGCCGCAAAAGGTGCATGATGAGCTGAACACCGCAGCCAAT
GCGTCGGCCATCAGGAACATGTTGCTGGTATCCGCCCAGCATAAATTCAAGGAAAGGTGCCTTGATCCGCTTGGGGCCGA
GGCGTTGTTTTTCAAAGGCATCAGCCTGGTCAGCCAGTACTACCCGGATCTCGGCCTGCGGCCTTGCCGCGACATTGACG
TTCTGGTGCGCCCCGAAACGCTGCGCCCCGTTGTGCTGGCGGCAATCGACGCAGGCTATAAGTTCGTCGTGCCCGGCCAG
GCCGAGCATCCGCTGACAGAACCCTCGGAAATTGACGCCGCACTCCATTATCGCAATGACGCGAGCCTTCTGACGCCGGA
AGGCATGGCGATTGACCTGCAGGTCAAGCTGGACAAATACTCCGGCATCTTCTCGCGCGAGGATGTCTTTGCGCAGGCCA
TACCCGCCGTGCTCGGTGGCAAAGAGTTCATGACCATGCCGCCTGCGTTTCTGTTCAACTACCTGTGCCACCACCACGCA
CGGCATGTCTGGTCCCGGCTGCACTGGCTGAGCGATCTGGATGCGCTGGTCAATGCGCCCCAATTTGATGTGGATGAGGC
CGTCGCGCTGGCCCAAAAGCTCAATCAGAGCGGTACTGTCGAGGCCAGCCTTGAGATGCAGCGCCTCATGTCGCCCGCGC
AATCCTGGGATGACGCCCCGGAAATGTGGCGGGGCTTCAAGTTTCTGGAACTCAGTCTGCGTAACCTCTCCGGTGACCTC
GATCTGGAAAAACGCATCGGGTTCAACATGAAGGGCGCGGAATTCATGTTTGACTGGCAAGCAGATCCCAGCCTCATTCG
CAAAGCACGGCTGCGCCACTCCCTGCGCGTGTGGCAGCCGACGATCCGACAATACACCCGCTTTCCCCTGCCGCGCGGCT
TGCGATGGCTTTATGTCTTCCCGAGGTTCATGCACCTGTTGGAAAGAACGCGGGATCGGGGCGGCAAGAAAGCAGAATAA

Upstream 100 bases:

>100_bases
GCATCTTGGCTCTGGAAGCTACAGCCTCACGGTCTTATCAATGGAGATGCGCCTTTTTTTCTGGCAAACGTAGCCGCACC
CTAGGAATAGTAGCCACCTC

Downstream 100 bases:

>100_bases
ACCCTGAGCCCATCACGAAGGACAGGCGCATGGTTGACCTTCTCCCCTTGGAACGCTTTGAGAGCCCGGACAAAAACTTT
TGAGGACATCTGATACCATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MDSSLNTAEMRLHVAFAKVGFTQDEQRAAESLARQVTDWDGFVATAMRNFSLPNMRMHLSRMTPDCVPQKVHDELNTAAN
ASAIRNMLLVSAQHKFKERCLDPLGAEALFFKGISLVSQYYPDLGLRPCRDIDVLVRPETLRPVVLAAIDAGYKFVVPGQ
AEHPLTEPSEIDAALHYRNDASLLTPEGMAIDLQVKLDKYSGIFSREDVFAQAIPAVLGGKEFMTMPPAFLFNYLCHHHA
RHVWSRLHWLSDLDALVNAPQFDVDEAVALAQKLNQSGTVEASLEMQRLMSPAQSWDDAPEMWRGFKFLELSLRNLSGDL
DLEKRIGFNMKGAEFMFDWQADPSLIRKARLRHSLRVWQPTIRQYTRFPLPRGLRWLYVFPRFMHLLERTRDRGGKKAE

Sequences:

>Translated_399_residues
MDSSLNTAEMRLHVAFAKVGFTQDEQRAAESLARQVTDWDGFVATAMRNFSLPNMRMHLSRMTPDCVPQKVHDELNTAAN
ASAIRNMLLVSAQHKFKERCLDPLGAEALFFKGISLVSQYYPDLGLRPCRDIDVLVRPETLRPVVLAAIDAGYKFVVPGQ
AEHPLTEPSEIDAALHYRNDASLLTPEGMAIDLQVKLDKYSGIFSREDVFAQAIPAVLGGKEFMTMPPAFLFNYLCHHHA
RHVWSRLHWLSDLDALVNAPQFDVDEAVALAQKLNQSGTVEASLEMQRLMSPAQSWDDAPEMWRGFKFLELSLRNLSGDL
DLEKRIGFNMKGAEFMFDWQADPSLIRKARLRHSLRVWQPTIRQYTRFPLPRGLRWLYVFPRFMHLLERTRDRGGKKAE
>Mature_399_residues
MDSSLNTAEMRLHVAFAKVGFTQDEQRAAESLARQVTDWDGFVATAMRNFSLPNMRMHLSRMTPDCVPQKVHDELNTAAN
ASAIRNMLLVSAQHKFKERCLDPLGAEALFFKGISLVSQYYPDLGLRPCRDIDVLVRPETLRPVVLAAIDAGYKFVVPGQ
AEHPLTEPSEIDAALHYRNDASLLTPEGMAIDLQVKLDKYSGIFSREDVFAQAIPAVLGGKEFMTMPPAFLFNYLCHHHA
RHVWSRLHWLSDLDALVNAPQFDVDEAVALAQKLNQSGTVEASLEMQRLMSPAQSWDDAPEMWRGFKFLELSLRNLSGDL
DLEKRIGFNMKGAEFMFDWQADPSLIRKARLRHSLRVWQPTIRQYTRFPLPRGLRWLYVFPRFMHLLERTRDRGGKKAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45525; Mature: 45525

Theoretical pI: Translated: 7.43; Mature: 7.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSSLNTAEMRLHVAFAKVGFTQDEQRAAESLARQVTDWDGFVATAMRNFSLPNMRMHLS
CCCCCCHHHHHEEEEHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHH
RMTPDCVPQKVHDELNTAANASAIRNMLLVSAQHKFKERCLDPLGAEALFFKGISLVSQY
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
YPDLGLRPCRDIDVLVRPETLRPVVLAAIDAGYKFVVPGQAEHPLTEPSEIDAALHYRND
CCCCCCCCCCCCEEEECCCCCCHHHHHEECCCCEEEECCCCCCCCCCCHHHHHHHEECCC
ASLLTPEGMAIDLQVKLDKYSGIFSREDVFAQAIPAVLGGKEFMTMPPAFLFNYLCHHHA
CCEECCCCEEEEEEEEEEHHCCCCCHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHH
RHVWSRLHWLSDLDALVNAPQFDVDEAVALAQKLNQSGTVEASLEMQRLMSPAQSWDDAP
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHCCCCCH
EMWRGFKFLELSLRNLSGDLDLEKRIGFNMKGAEFMFDWQADPSLIRKARLRHSLRVWQP
HHHHCHHHHHHHHHHCCCCCCHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHH
TIRQYTRFPLPRGLRWLYVFPRFMHLLERTRDRGGKKAE
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MDSSLNTAEMRLHVAFAKVGFTQDEQRAAESLARQVTDWDGFVATAMRNFSLPNMRMHLS
CCCCCCHHHHHEEEEHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHH
RMTPDCVPQKVHDELNTAANASAIRNMLLVSAQHKFKERCLDPLGAEALFFKGISLVSQY
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
YPDLGLRPCRDIDVLVRPETLRPVVLAAIDAGYKFVVPGQAEHPLTEPSEIDAALHYRND
CCCCCCCCCCCCEEEECCCCCCHHHHHEECCCCEEEECCCCCCCCCCCHHHHHHHEECCC
ASLLTPEGMAIDLQVKLDKYSGIFSREDVFAQAIPAVLGGKEFMTMPPAFLFNYLCHHHA
CCEECCCCEEEEEEEEEEHHCCCCCHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHH
RHVWSRLHWLSDLDALVNAPQFDVDEAVALAQKLNQSGTVEASLEMQRLMSPAQSWDDAP
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHCCCCCH
EMWRGFKFLELSLRNLSGDLDLEKRIGFNMKGAEFMFDWQADPSLIRKARLRHSLRVWQP
HHHHCHHHHHHHHHHCCCCCCHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHH
TIRQYTRFPLPRGLRWLYVFPRFMHLLERTRDRGGKKAE
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA