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The map label for this gene is 110680983

Identifier: 110680983

GI number: 110680983

Start: 3712802

End: 3714031

Strand: Direct

Name: 110680983

Synonym: RD1_3841

Alternate gene names: NA

Gene position: 3712802-3714031 (Clockwise)

Preceding gene: 110680981

Following gene: 110680985

Centisome position: 89.83

GC content: 59.51

Gene sequence:

>1230_bases
ATGCGTAAGTCATTGACAGAAATTATTGGTCGTACGGCACGCACTTTTGCAGTTGGGCTGCTGTGCACGCTGGCAACCGC
TGCTACGGCAGAGCCCTACCGTCTGGCACCGGGTGATCGTGTGCTGGTCCAGATCATCGAATTGAACAACCACTCTTACG
TCGGCACGGTGGATACGGCAGGTCAAATCCGCCTGCCTTATCTGGGCACGCATCTGGCTGCGAACAAAACGCTCGATGAG
TTGTCGCAGGATATTTCGCTGGCTGTCGCAGGCCAGCAAATCCGTTCGGTCCAGAACGGCATATCCTCGGTCATCGTGCT
GGATGAACAGGACATTTTCCTTGATATCGACACCTATCGCCCCGTCACCGTGGTCGGCGCTGTCGCCGCACCGGGCCGCG
TCCCCTTTGAGCCGGGGCTCAATGTGCGGGCCGCCATCGGCTCGGCTGGCGGGAACGCGCTGGCGGGGCAAACGGAACGC
GTTGATCAACTGGCCAACTTTCGCACCCGGCAGGCCGAGTTGCGCGAGACCGAAGCATGGCTTGCGGCGGAGCTTTGGCG
CATCGACGTTCTGCTGTCCGGCGCGGACAGCGATACACCGATTGGTGAAGAGTACCGGATCGTCGAAGATCGCCTCGACA
GCCGCGATGTCGAGAATTTCAGACGCATGATCGACGGCGCGCGCGCGCAATTGGACCGGGAACGCGAAGACAATGCAGCG
CGGATCGTTCTGACCAAGAAGCGCACGGAGTTTCTTGAAACCGCGCTGGCGCAGTTTCAAACAGCATCAGAGATCGAGGA
AGAAAGACTGCAGGATGTTCTGCAGCTGTCAAACCGGGGGCTGACCACGGTCAACTCTCTCGACAATGCCCGCGAGGGGG
CGCTTAACGCGTCGTCGCGTTTGCTGACGACGCAAGCCGATCTGGCCGCCGCAGAGAGCGAATTGCAGTCGCTGATGATC
GAAAAACAGGGGCTGGACGCAGACTTCGTTCAGGCGTTGATGGATGAGAAAGCCAAGTTCGAGCGTGACTATGACGAAGC
GCGGGCGCGTCTGACCAGCCTCAACCGTGAACTGGCGCTTGGCACCTTCACCGCCGAACAGGACGACTCCACGGAACTGC
AATACATCCTGCATCGTCAAGACGGCGCAAGCGAGACGAGCACGGAAGTCACGCCAGACACGCTGTTGCGTCCGGGCGAC
GTTGTGGAAGTGATCTTTACCTACAACTGA

Upstream 100 bases:

>100_bases
CTACGCCGCACGCTCTGGACAAAACGCGTGAAACAGGGTCAGTGTCTGCGCGTCACATGAAAGGGTAATTCGATGTTCTT
TAAGGGGGTCGGTGTTTGGT

Downstream 100 bases:

>100_bases
ACCGATTGGACGAGGACGTCAGGACGGACAATTGAGCGCTGAGTCAAAGGCGCCATTCTCGCGCACCTCGGCGCCAATTC
TGTTCCAGACATCCCCGCCC

Product: polysaccharide biosynthesis/export protein, putative

Products: NA

Alternate protein names: Polysaccharide Biosynthesis/Export Protein

Number of amino acids: Translated: 409; Mature: 409

Protein sequence:

>409_residues
MRKSLTEIIGRTARTFAVGLLCTLATAATAEPYRLAPGDRVLVQIIELNNHSYVGTVDTAGQIRLPYLGTHLAANKTLDE
LSQDISLAVAGQQIRSVQNGISSVIVLDEQDIFLDIDTYRPVTVVGAVAAPGRVPFEPGLNVRAAIGSAGGNALAGQTER
VDQLANFRTRQAELRETEAWLAAELWRIDVLLSGADSDTPIGEEYRIVEDRLDSRDVENFRRMIDGARAQLDREREDNAA
RIVLTKKRTEFLETALAQFQTASEIEEERLQDVLQLSNRGLTTVNSLDNAREGALNASSRLLTTQADLAAAESELQSLMI
EKQGLDADFVQALMDEKAKFERDYDEARARLTSLNRELALGTFTAEQDDSTELQYILHRQDGASETSTEVTPDTLLRPGD
VVEVIFTYN

Sequences:

>Translated_409_residues
MRKSLTEIIGRTARTFAVGLLCTLATAATAEPYRLAPGDRVLVQIIELNNHSYVGTVDTAGQIRLPYLGTHLAANKTLDE
LSQDISLAVAGQQIRSVQNGISSVIVLDEQDIFLDIDTYRPVTVVGAVAAPGRVPFEPGLNVRAAIGSAGGNALAGQTER
VDQLANFRTRQAELRETEAWLAAELWRIDVLLSGADSDTPIGEEYRIVEDRLDSRDVENFRRMIDGARAQLDREREDNAA
RIVLTKKRTEFLETALAQFQTASEIEEERLQDVLQLSNRGLTTVNSLDNAREGALNASSRLLTTQADLAAAESELQSLMI
EKQGLDADFVQALMDEKAKFERDYDEARARLTSLNRELALGTFTAEQDDSTELQYILHRQDGASETSTEVTPDTLLRPGD
VVEVIFTYN
>Mature_409_residues
MRKSLTEIIGRTARTFAVGLLCTLATAATAEPYRLAPGDRVLVQIIELNNHSYVGTVDTAGQIRLPYLGTHLAANKTLDE
LSQDISLAVAGQQIRSVQNGISSVIVLDEQDIFLDIDTYRPVTVVGAVAAPGRVPFEPGLNVRAAIGSAGGNALAGQTER
VDQLANFRTRQAELRETEAWLAAELWRIDVLLSGADSDTPIGEEYRIVEDRLDSRDVENFRRMIDGARAQLDREREDNAA
RIVLTKKRTEFLETALAQFQTASEIEEERLQDVLQLSNRGLTTVNSLDNAREGALNASSRLLTTQADLAAAESELQSLMI
EKQGLDADFVQALMDEKAKFERDYDEARARLTSLNRELALGTFTAEQDDSTELQYILHRQDGASETSTEVTPDTLLRPGD
VVEVIFTYN

Specific function: Unknown

COG id: COG1596

COG function: function code M; Periplasmic protein involved in polysaccharide export

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45067; Mature: 45067

Theoretical pI: Translated: 4.33; Mature: 4.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKSLTEIIGRTARTFAVGLLCTLATAATAEPYRLAPGDRVLVQIIELNNHSYVGTVDTA
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEEEEEEEECCCEEEEEECCC
GQIRLPYLGTHLAANKTLDELSQDISLAVAGQQIRSVQNGISSVIVLDEQDIFLDIDTYR
CCEECCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEECCCC
PVTVVGAVAAPGRVPFEPGLNVRAAIGSAGGNALAGQTERVDQLANFRTRQAELRETEAW
CEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LAAELWRIDVLLSGADSDTPIGEEYRIVEDRLDSRDVENFRRMIDGARAQLDREREDNAA
HHHHHHEEEEEEECCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCE
RIVLTKKRTEFLETALAQFQTASEIEEERLQDVLQLSNRGLTTVNSLDNAREGALNASSR
EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHCCHHHCCCCCCCC
LLTTQADLAAAESELQSLMIEKQGLDADFVQALMDEKAKFERDYDEARARLTSLNRELAL
EEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHEE
GTFTAEQDDSTELQYILHRQDGASETSTEVTPDTLLRPGDVVEVIFTYN
EEEECCCCCCCHHHHEEECCCCCCCCCCCCCHHHHCCCCCEEEEEEECC
>Mature Secondary Structure
MRKSLTEIIGRTARTFAVGLLCTLATAATAEPYRLAPGDRVLVQIIELNNHSYVGTVDTA
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEEEEEEEECCCEEEEEECCC
GQIRLPYLGTHLAANKTLDELSQDISLAVAGQQIRSVQNGISSVIVLDEQDIFLDIDTYR
CCEECCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEECCCC
PVTVVGAVAAPGRVPFEPGLNVRAAIGSAGGNALAGQTERVDQLANFRTRQAELRETEAW
CEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LAAELWRIDVLLSGADSDTPIGEEYRIVEDRLDSRDVENFRRMIDGARAQLDREREDNAA
HHHHHHEEEEEEECCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCE
RIVLTKKRTEFLETALAQFQTASEIEEERLQDVLQLSNRGLTTVNSLDNAREGALNASSR
EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHCCHHHCCCCCCCC
LLTTQADLAAAESELQSLMIEKQGLDADFVQALMDEKAKFERDYDEARARLTSLNRELAL
EEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHEE
GTFTAEQDDSTELQYILHRQDGASETSTEVTPDTLLRPGDVVEVIFTYN
EEEECCCCCCCHHHHEEECCCCCCCCCCCCCHHHHCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA