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The map label for this gene is rfaB [C]

Identifier: 110680986

GI number: 110680986

Start: 3716829

End: 3717974

Strand: Direct

Name: rfaB [C]

Synonym: RD1_3845

Alternate gene names: 110680986

Gene position: 3716829-3717974 (Clockwise)

Preceding gene: 110680985

Following gene: 110680987

Centisome position: 89.93

GC content: 61.95

Gene sequence:

>1146_bases
TTGAGGACATCTGATACCATGCAGCAGCCGCTTCGCATTGCGCTTGTTCTGGAAACCTCTGGCGGAGGGTCCGGGCGCCA
CGCGCTTGATCTTGCCGAAGGGCTGGCCCTGTCCGGCCATGACGTCACCGTGATCTGGTCACCGGTGCGCGCACAGGAAG
ATTTTCAGACACGGCTGTTGGCCATGCCGACTATTAAAAACCTGCAACTGACGATGCATCGCGCTGTAGGGTTGGCCGAT
GCAAGCAGCCTGCGTGCGCTCAAATCGCTGCTGAAGGCGCATGGCCCGTTTGATGTGATCCACGGTCACAGCTCCAAGGC
AGGCGCGTTGATCCGCCTGCTGCCGCGCAGTATCCCCGGGGCGCGCATTTACACGCCGCATGCTTTTCGCACGATGGACC
CGGATATGGGCGGCCGGGCCCGGCGCGTCTATGGCATGATCGAACGGATTCTCGCGCCGCGTGGGGATCAAATCATCACT
GTGAGTTCCGCAGAATATCAGCACGCCGTCGGACTGGGGATCAACGCGCGAAAGCTGACGACAGTTGTGAATGGAGCGAC
GCTGCACGGTGAGGCGGATCGTGCTGCGGCGCGCGCCTTCATGGAGCTTGGGCCCGATGACGTGGCGGTCGGATTCATCG
GACGTCTCGACGCACAAAAAGCGCCACTGCGCTTTGTCGAGGCGGTTTCATTGGCCGCAAAGCAGGCGCCCCACCTGCGC
GGCCTCGTGATCGGCGATGGGTCACTGCGTGCGCACGCAGAAGCGCTCAACACCGCAGACGCGGTTCGGTTTCTGGGGTG
GCAGGATGGACCGGCGCTGTTTCCCGGCCTCGATGTCTTTTGTATGACCAGCCACTACGAAGCGATGCCCTACACCCTGC
TTGAGGCGCTGCATGCGGGCGTGCCGATTGTGACCACCTCTGTTGGCGGCGTCGAAGAAACCGTGAATGAAGGCGTGAAC
GGATTTGTGCTGCCGACAGACAGCACCGCAGCCGAGATTGCAGAACCGCTGATCAAGCTTGCCACAGACGCCGGGCAACG
CGATGCTTTTGGCGCTGAGGCCCAACGCATGGCCATGACACGCACGGTGCAGGTTATGGTCGAGGACACAATACGCGTGT
ATCAGACCGCCTGCGCGCAGGGCTGA

Upstream 100 bases:

>100_bases
GGCGGCAAGAAAGCAGAATAAACCCTGAGCCCATCACGAAGGACAGGCGCATGGTTGACCTTCTCCCCTTGGAACGCTTT
GAGAGCCCGGACAAAAACTT

Downstream 100 bases:

>100_bases
CGCGAACCGGGCCGCGTCGCGCGTCGCGTCTACCGTGAGGCACGTCAGTTTTCGCGTTCAACCGCAGGCAAATGCAGCGA
ACAAGCAGTAAAAGCGAAAC

Product: glycosyl transferase, group 1 family protein

Products: NA

Alternate protein names: ORF7 [H]

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MRTSDTMQQPLRIALVLETSGGGSGRHALDLAEGLALSGHDVTVIWSPVRAQEDFQTRLLAMPTIKNLQLTMHRAVGLAD
ASSLRALKSLLKAHGPFDVIHGHSSKAGALIRLLPRSIPGARIYTPHAFRTMDPDMGGRARRVYGMIERILAPRGDQIIT
VSSAEYQHAVGLGINARKLTTVVNGATLHGEADRAAARAFMELGPDDVAVGFIGRLDAQKAPLRFVEAVSLAAKQAPHLR
GLVIGDGSLRAHAEALNTADAVRFLGWQDGPALFPGLDVFCMTSHYEAMPYTLLEALHAGVPIVTTSVGGVEETVNEGVN
GFVLPTDSTAAEIAEPLIKLATDAGQRDAFGAEAQRMAMTRTVQVMVEDTIRVYQTACAQG

Sequences:

>Translated_381_residues
MRTSDTMQQPLRIALVLETSGGGSGRHALDLAEGLALSGHDVTVIWSPVRAQEDFQTRLLAMPTIKNLQLTMHRAVGLAD
ASSLRALKSLLKAHGPFDVIHGHSSKAGALIRLLPRSIPGARIYTPHAFRTMDPDMGGRARRVYGMIERILAPRGDQIIT
VSSAEYQHAVGLGINARKLTTVVNGATLHGEADRAAARAFMELGPDDVAVGFIGRLDAQKAPLRFVEAVSLAAKQAPHLR
GLVIGDGSLRAHAEALNTADAVRFLGWQDGPALFPGLDVFCMTSHYEAMPYTLLEALHAGVPIVTTSVGGVEETVNEGVN
GFVLPTDSTAAEIAEPLIKLATDAGQRDAFGAEAQRMAMTRTVQVMVEDTIRVYQTACAQG
>Mature_381_residues
MRTSDTMQQPLRIALVLETSGGGSGRHALDLAEGLALSGHDVTVIWSPVRAQEDFQTRLLAMPTIKNLQLTMHRAVGLAD
ASSLRALKSLLKAHGPFDVIHGHSSKAGALIRLLPRSIPGARIYTPHAFRTMDPDMGGRARRVYGMIERILAPRGDQIIT
VSSAEYQHAVGLGINARKLTTVVNGATLHGEADRAAARAFMELGPDDVAVGFIGRLDAQKAPLRFVEAVSLAAKQAPHLR
GLVIGDGSLRAHAEALNTADAVRFLGWQDGPALFPGLDVFCMTSHYEAMPYTLLEALHAGVPIVTTSVGGVEETVNEGVN
GFVLPTDSTAAEIAEPLIKLATDAGQRDAFGAEAQRMAMTRTVQVMVEDTIRVYQTACAQG

Specific function: Adds A Galactose Goup To A Glucose Group Of Lps. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 40633; Mature: 40633

Theoretical pI: Translated: 7.01; Mature: 7.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTSDTMQQPLRIALVLETSGGGSGRHALDLAEGLALSGHDVTVIWSPVRAQEDFQTRLL
CCCCHHHHCCEEEEEEEEECCCCCCCHHHHHHHCCEECCCCEEEEECCCCCCHHHHHHHH
AMPTIKNLQLTMHRAVGLADASSLRALKSLLKAHGPFDVIHGHSSKAGALIRLLPRSIPG
HCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHCCCCC
ARIYTPHAFRTMDPDMGGRARRVYGMIERILAPRGDQIITVSSAEYQHAVGLGINARKLT
CEEECCCCCEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHCCCCCHHHHH
TVVNGATLHGEADRAAARAFMELGPDDVAVGFIGRLDAQKAPLRFVEAVSLAAKQAPHLR
EEECCCEECCCHHHHHHHHHHHCCCCCEEEEHHHCCCCCCCHHHHHHHHHHHHHCCCCEE
GLVIGDGSLRAHAEALNTADAVRFLGWQDGPALFPGLDVFCMTSHYEAMPYTLLEALHAG
EEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCC
VPIVTTSVGGVEETVNEGVNGFVLPTDSTAAEIAEPLIKLATDAGQRDAFGAEAQRMAMT
CCEEEECCCCHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
RTVQVMVEDTIRVYQTACAQG
HHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRTSDTMQQPLRIALVLETSGGGSGRHALDLAEGLALSGHDVTVIWSPVRAQEDFQTRLL
CCCCHHHHCCEEEEEEEEECCCCCCCHHHHHHHCCEECCCCEEEEECCCCCCHHHHHHHH
AMPTIKNLQLTMHRAVGLADASSLRALKSLLKAHGPFDVIHGHSSKAGALIRLLPRSIPG
HCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHCCCCC
ARIYTPHAFRTMDPDMGGRARRVYGMIERILAPRGDQIITVSSAEYQHAVGLGINARKLT
CEEECCCCCEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHCCCCCHHHHH
TVVNGATLHGEADRAAARAFMELGPDDVAVGFIGRLDAQKAPLRFVEAVSLAAKQAPHLR
EEECCCEECCCHHHHHHHHHHHCCCCCEEEEHHHCCCCCCCHHHHHHHHHHHHHCCCCEE
GLVIGDGSLRAHAEALNTADAVRFLGWQDGPALFPGLDVFCMTSHYEAMPYTLLEALHAG
EEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCC
VPIVTTSVGGVEETVNEGVNGFVLPTDSTAAEIAEPLIKLATDAGQRDAFGAEAQRMAMT
CCEEEECCCCHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
RTVQVMVEDTIRVYQTACAQG
HHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Hexosyltransferases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7896702 [H]