Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is 110680937

Identifier: 110680937

GI number: 110680937

Start: 3669957

End: 3670247

Strand: Direct

Name: 110680937

Synonym: RD1_3790

Alternate gene names: NA

Gene position: 3669957-3670247 (Clockwise)

Preceding gene: 110680922

Following gene: 110680938

Centisome position: 88.79

GC content: 56.36

Gene sequence:

>291_bases
ATGTTTGCAGTCACGGTCACATTCTCCCTTAAAGCCGGGTGCGCCGAAAAATTCATGCCGCTGATGTATGAGAACGCGAG
GGCGTCGTTGGAGAGTGAGGTCGGCTGCCTGCAGTTTGACGTGGCAACAGACAGCGCGCGACCTGAGGAAGTGTTTCTCT
ACGAGGTTTACTCAGACGCTGCCGCGTTTGACGCACATCTTGGGGCGACGCATTTTCAGGCCTTCGATGCCGCAACCGCC
GACATGATTGCAGCCACGGACATCAAGACCTACCGGAGTGTCGTTCAGTGA

Upstream 100 bases:

>100_bases
CACTTTCATCGCAATTGCATTAGCGTATACATTAATGCATACTTTATTCAACCACGCAGAACGCTTGGCCTGAAAAGCAC
CCCAGAAGAGAGCGAAACGA

Downstream 100 bases:

>100_bases
GCACATGGGAAGTACACGCCATCAAATATGCGGATCGAAACAGCCGCACACGGCGCGACAGTTTTATCTTTGATGACAAC
CACGACGCGCCCCATCCCAT

Product: hypothetical protein

Products: NA

Alternate protein names: Antibiotic Biosynthesis Monooxygenase Domain Protein

Number of amino acids: Translated: 96; Mature: 96

Protein sequence:

>96_residues
MFAVTVTFSLKAGCAEKFMPLMYENARASLESEVGCLQFDVATDSARPEEVFLYEVYSDAAAFDAHLGATHFQAFDAATA
DMIAATDIKTYRSVVQ

Sequences:

>Translated_96_residues
MFAVTVTFSLKAGCAEKFMPLMYENARASLESEVGCLQFDVATDSARPEEVFLYEVYSDAAAFDAHLGATHFQAFDAATA
DMIAATDIKTYRSVVQ
>Mature_96_residues
MFAVTVTFSLKAGCAEKFMPLMYENARASLESEVGCLQFDVATDSARPEEVFLYEVYSDAAAFDAHLGATHFQAFDAATA
DMIAATDIKTYRSVVQ

Specific function: Unknown

COG id: COG1359

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10488; Mature: 10488

Theoretical pI: Translated: 4.15; Mature: 4.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFAVTVTFSLKAGCAEKFMPLMYENARASLESEVGCLQFDVATDSARPEEVFLYEVYSDA
CEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEEECCCC
AAFDAHLGATHFQAFDAATADMIAATDIKTYRSVVQ
HHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFAVTVTFSLKAGCAEKFMPLMYENARASLESEVGCLQFDVATDSARPEEVFLYEVYSDA
CEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEEECCCC
AAFDAHLGATHFQAFDAATADMIAATDIKTYRSVVQ
HHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA