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The map label for this gene is pcaG [H]

Identifier: 110680922

GI number: 110680922

Start: 3656706

End: 3657293

Strand: Direct

Name: pcaG [H]

Synonym: RD1_3775

Alternate gene names: 110680922

Gene position: 3656706-3657293 (Clockwise)

Preceding gene: 110680921

Following gene: 110680937

Centisome position: 88.47

GC content: 60.2

Gene sequence:

>588_bases
ATGACGCTGCCTGATCCCCCCAAACAGGAAACCGCGTCGCAGACCGCAGGCCCCTATGTCCACATCGGACTCCTGCCAAG
AATGGCGGGCCTTGCCTTGCATCCAGTGGAACTGGGCCGCAGCCTTGTCGGACCGGAAACCAAAGACGCGCGCATCACGG
TCACGGGGTGCATCCATGACGGTGCAGGCGATCGCGTGAGAGATGCTATCATCGAGGTCTGGCAGGCAGATGGCACGGGC
AGCCTCGCAGGAAACGACGGCTTCACCGGGTGGGGACGCGTGGCGACGGACTTCGACACAGGTGTGTTCTCGTTTGAAAC
CATCAAACCGGGATGCGTTTTGGATGCGGGCGGTAAAGTGATGGCTCCGCACCTTTGCTTTTGGATTGTGGCGCGGGGGA
TCAACATGGGGCTGAGCACACGGATGTATTTCCCGCAGGACAGTCAAGCGCATGAAACAGATCCCGTACTGTCAGGATAT
GTGCCGCGAGAACGGCGCGACACCCTGATCGCCCGGCGCGAGGGCGACACCTATCACTTTGACATTCACCTGCAGGGCGC
GCGGGAAACCGTTTTCTTTGATGTGTGA

Upstream 100 bases:

>100_bases
AGACGAGCGAACCCTTTGACAGTATCGCCTACCGCTTTGACATCGTCCTGCGTGGGGCATGTTCCACCCCCTTTGAAAAC
CGACCCGAGGGGAATTGACC

Downstream 100 bases:

>100_bases
CGTTCAGCCCTGCAAGAGGCCATTCAGATAGGCCGCATTTCCCTTCAGCGCGGCGTAATCATCCTGCACGACATAGATCG
CGAAATCCGTCATGAAGTCA

Product: protocatechuate 3,4-dioxygenase, alpha subunit

Products: NA

Alternate protein names: 3,4-PCD [H]

Number of amino acids: Translated: 195; Mature: 194

Protein sequence:

>195_residues
MTLPDPPKQETASQTAGPYVHIGLLPRMAGLALHPVELGRSLVGPETKDARITVTGCIHDGAGDRVRDAIIEVWQADGTG
SLAGNDGFTGWGRVATDFDTGVFSFETIKPGCVLDAGGKVMAPHLCFWIVARGINMGLSTRMYFPQDSQAHETDPVLSGY
VPRERRDTLIARREGDTYHFDIHLQGARETVFFDV

Sequences:

>Translated_195_residues
MTLPDPPKQETASQTAGPYVHIGLLPRMAGLALHPVELGRSLVGPETKDARITVTGCIHDGAGDRVRDAIIEVWQADGTG
SLAGNDGFTGWGRVATDFDTGVFSFETIKPGCVLDAGGKVMAPHLCFWIVARGINMGLSTRMYFPQDSQAHETDPVLSGY
VPRERRDTLIARREGDTYHFDIHLQGARETVFFDV
>Mature_194_residues
TLPDPPKQETASQTAGPYVHIGLLPRMAGLALHPVELGRSLVGPETKDARITVTGCIHDGAGDRVRDAIIEVWQADGTGS
LAGNDGFTGWGRVATDFDTGVFSFETIKPGCVLDAGGKVMAPHLCFWIVARGINMGLSTRMYFPQDSQAHETDPVLSGYV
PRERRDTLIARREGDTYHFDIHLQGARETVFFDV

Specific function: Plays an essential role in the utilization of numerous aromatic and hydroaromatic compounds via the beta-ketoadipate pathway [H]

COG id: COG3485

COG function: function code Q; Protocatechuate 3,4-dioxygenase beta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the intradiol ring-cleavage dioxygenase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000627
- InterPro:   IPR015889
- InterPro:   IPR012786 [H]

Pfam domain/function: PF00775 Dioxygenase_C [H]

EC number: =1.13.11.3 [H]

Molecular weight: Translated: 21224; Mature: 21093

Theoretical pI: Translated: 5.54; Mature: 5.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLPDPPKQETASQTAGPYVHIGLLPRMAGLALHPVELGRSLVGPETKDARITVTGCIHD
CCCCCCCCHHHHHHCCCCEEEEECHHHHCCCEECHHHHCHHHCCCCCCCCEEEEEEEEEC
GAGDRVRDAIIEVWQADGTGSLAGNDGFTGWGRVATDFDTGVFSFETIKPGCVLDAGGKV
CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEECCCCCEEEECCCCE
MAPHLCFWIVARGINMGLSTRMYFPQDSQAHETDPVLSGYVPRERRDTLIARREGDTYHF
EHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEE
DIHLQGARETVFFDV
EEEECCCCEEEEEEC
>Mature Secondary Structure 
TLPDPPKQETASQTAGPYVHIGLLPRMAGLALHPVELGRSLVGPETKDARITVTGCIHD
CCCCCCCHHHHHHCCCCEEEEECHHHHCCCEECHHHHCHHHCCCCCCCCEEEEEEEEEC
GAGDRVRDAIIEVWQADGTGSLAGNDGFTGWGRVATDFDTGVFSFETIKPGCVLDAGGKV
CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEECCCCCEEEECCCCE
MAPHLCFWIVARGINMGLSTRMYFPQDSQAHETDPVLSGYVPRERRDTLIARREGDTYHF
EHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEE
DIHLQGARETVFFDV
EEEECCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2298704; 8063101 [H]