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The map label for this gene is 110680918

Identifier: 110680918

GI number: 110680918

Start: 3653410

End: 3654111

Strand: Direct

Name: 110680918

Synonym: RD1_3771

Alternate gene names: NA

Gene position: 3653410-3654111 (Clockwise)

Preceding gene: 110680917

Following gene: 110680919

Centisome position: 88.39

GC content: 54.7

Gene sequence:

>702_bases
ATGGTCAAACGTGCCAATGCCGCCATTGAACCCGAGGAGTTGTCAGAGGTCGAACTGGCCTTGGAAAATGCCGAGATCGA
GGAAGGCCCGAAAGACGACCGCGAATGGGGCAAGAACTGGATCGACCGGTTGTCGCTGTTTTGCGGCGAATTCGTCTCCT
ACTGGGCGGTGATCGCGGTCTTTGTCTACTACTACGAGGTGATCGCGCGCTATGTCTTCAACTCGCCCACCAACTGGGCA
CATGAGGCAATGTATCTGATGTTCGGCATGCAATATCTGATCGCCGGCTCTTATGCGATGCTGACCGAAACCCATGTGCG
CGTTGATATCTTTTATGCACCGCTGGAGAAAAAATCCAAAGCATGGGTCGACCTGTTGACCTCTGTGTTTTTCTTTATCT
TTGCCGGCACGCTTTTGGTGACCAGCTACATCTTTGCGATGGATGCGATCGCTGTGCCCTCGGGCAATGGTGTCCTGTCG
TCCTGGGCGCGCGGTGAAATCCCGACCAGTGAAATGCTGGCCACTTTCAACATGGCGCAGTTCACAGACTCTGCGATTCG
CTGGGGCGAGATCAGCTTTAACGAATGGGAAGTGCCGCTGTGGCCGATGAAATGGGTCATGGTGATTGGCGGTCTGCTTT
TGGTGCTGCAAGGCATCTCGAAGCTGGCAAAAGACGTGCGCGCTGTCGCAAGAGGGGCATAG

Upstream 100 bases:

>100_bases
TGTTGCAACACAAACGCGACTTTTCTGGACGAACGCCGCGAAATACGCGCTGTATGTCATTCTTGCGTTTCTGGTTATCG
ATGCGCTGATGTTGCCGGGC

Downstream 100 bases:

>100_bases
ACCATGGGCATTGAAATCGGAATTGAGCTTTTAACGCTCATCATGTTCGGCAGCCTGCTGGCGCTTTTGATGGCGGGTTT
GCCACTGGCCTTTGTCACGG

Product: TRAP transporter, DctQ-like membrane protein, putative

Products: NA

Alternate protein names: TRAP Transporter DctQ-Like Membrane Protein; Small Integral Membrane Tranport Protein; TRAP Dicarboxylate Transporter Subunit DctQ; TRAP Dicarboxylate Family Transporter DctQ Subunit; Mannitol Transporter; TRAP Transporter Small Transmembrane Protein; TRAP Dicarboxylate Transporter DctM Subunit; TRAP Dicarboxylate Transporter DctQ Subunit; Tripartite ATP-Independent Periplasmic

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MVKRANAAIEPEELSEVELALENAEIEEGPKDDREWGKNWIDRLSLFCGEFVSYWAVIAVFVYYYEVIARYVFNSPTNWA
HEAMYLMFGMQYLIAGSYAMLTETHVRVDIFYAPLEKKSKAWVDLLTSVFFFIFAGTLLVTSYIFAMDAIAVPSGNGVLS
SWARGEIPTSEMLATFNMAQFTDSAIRWGEISFNEWEVPLWPMKWVMVIGGLLLVLQGISKLAKDVRAVARGA

Sequences:

>Translated_233_residues
MVKRANAAIEPEELSEVELALENAEIEEGPKDDREWGKNWIDRLSLFCGEFVSYWAVIAVFVYYYEVIARYVFNSPTNWA
HEAMYLMFGMQYLIAGSYAMLTETHVRVDIFYAPLEKKSKAWVDLLTSVFFFIFAGTLLVTSYIFAMDAIAVPSGNGVLS
SWARGEIPTSEMLATFNMAQFTDSAIRWGEISFNEWEVPLWPMKWVMVIGGLLLVLQGISKLAKDVRAVARGA
>Mature_233_residues
MVKRANAAIEPEELSEVELALENAEIEEGPKDDREWGKNWIDRLSLFCGEFVSYWAVIAVFVYYYEVIARYVFNSPTNWA
HEAMYLMFGMQYLIAGSYAMLTETHVRVDIFYAPLEKKSKAWVDLLTSVFFFIFAGTLLVTSYIFAMDAIAVPSGNGVLS
SWARGEIPTSEMLATFNMAQFTDSAIRWGEISFNEWEVPLWPMKWVMVIGGLLLVLQGISKLAKDVRAVARGA

Specific function: Unknown

COG id: COG4665

COG function: function code Q; TRAP-type mannitol/chloroaromatic compound transport system, small permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26417; Mature: 26417

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKRANAAIEPEELSEVELALENAEIEEGPKDDREWGKNWIDRLSLFCGEFVSYWAVIAV
CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FVYYYEVIARYVFNSPTNWAHEAMYLMFGMQYLIAGSYAMLTETHVRVDIFYAPLEKKSK
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHEEEEEEECCCCHHHH
AWVDLLTSVFFFIFAGTLLVTSYIFAMDAIAVPSGNGVLSSWARGEIPTSEMLATFNMAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCHHHHHHHHHHHH
FTDSAIRWGEISFNEWEVPLWPMKWVMVIGGLLLVLQGISKLAKDVRAVARGA
HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVKRANAAIEPEELSEVELALENAEIEEGPKDDREWGKNWIDRLSLFCGEFVSYWAVIAV
CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FVYYYEVIARYVFNSPTNWAHEAMYLMFGMQYLIAGSYAMLTETHVRVDIFYAPLEKKSK
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHEEEEEEECCCCHHHH
AWVDLLTSVFFFIFAGTLLVTSYIFAMDAIAVPSGNGVLSSWARGEIPTSEMLATFNMAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCHHHHHHHHHHHH
FTDSAIRWGEISFNEWEVPLWPMKWVMVIGGLLLVLQGISKLAKDVRAVARGA
HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA