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The map label for this gene is yiaO [C]

Identifier: 110680917

GI number: 110680917

Start: 3651609

End: 3652709

Strand: Direct

Name: yiaO [C]

Synonym: RD1_3770

Alternate gene names: 110680917

Gene position: 3651609-3652709 (Clockwise)

Preceding gene: 110680910

Following gene: 110680918

Centisome position: 88.35

GC content: 58.58

Gene sequence:

>1101_bases
ATGACCATCAAAACCACAAGCCGCCGGAACGCGCTGCGCACTCTTGCCGGTGCAGGTGCCGCAACCTTGGCCGCACCGCA
TATTGCAACCGCAGCAGGTGAGGGGACAACCTGGAAAATCCAGACGTCGCACACTGGCGGGATTGGCCTTGCCACCTTCA
AGGACTGGTGCAGCTCGATCGAAGAGAAAACCGGCGGGGAACTTGCCTTTACCGCTTTTGGCGCGAATGACGTTGTGGGC
GACTTCCAGCTTTATGACGCGGTGAAGAACGGCGTTCTGGACGCTGTGAACCCGTTCACCATCTATGCTCAAGGCATCAT
TCCTGCCGCGACGTTCCTAACCAGCTATCCGCTGGGCCTGCGCAACCCGCATGAATGGGATGTCTTTTTCTACAGCCTTG
GCGGTCTTGAGATCGCGCGCGAGCTTTACGCGGCACAGGGTATGAAGTTCGTCGGCCCGGTCCACCACGGCCCCAACATC
ATCCACTCCAAGGTGCCGATCCGCTCCATCGACGATTTCGCGGGTCTGAAGATGCGCATGCCCGGCGGCATGGTCGCGGA
AGTCTTCAGCGAAATCGGTGCCGAGACAACCGTTCTGCCCGGCTCCGAAATCTTCCCGGCGCTTGAAAAAGGCACCATTG
ACGCGGCCGACTTTGTCGGGCCAGCGGTGAACTACGCGCTCGGCTTCAGTCAGGTGACAAACTATATTTCCATGGGCCCT
GCCGGATTTATGTCGCTGTATCAACCGGTTGACCTGATGGACATCACCGTGGGCCAAACTGCATGGGACGCCCTGTCGCC
ACAAATGCAGCAGTTCGTCGAGATGGAAACGCACGTCTACTCCGACATGCACCACGCCGCGATCCAAAAGGCCGATCAGG
AAGCATGGGCCAAGTTCGAAGCCGACGGCACGGAAGTCACGCGCCTGTCACAGGACGATGTGGAACTGATGACCGAGGTC
GCCGTACCGATCTGGTTCGACTATGCGAACCGCGACAAGGACGCAGCCCGCGTTTTCAAAATCCAGCTTGATTACATGAT
GTCCGGCTCTCTGGGCTACGTCACGCCAGAGCAGATCGAAGGTCTGACACTGAACCTCTGA

Upstream 100 bases:

>100_bases
AAAACTTCTTACCAATTGCGACAAAAAGTATTAAATCCTCGATCCAGATCAGGCGTGAGGCACATCCGTTCCTTTTGCCG
ATCCATATAGGGAGGACGAT

Downstream 100 bases:

>100_bases
TCGGGGTCAGATACTGACCAAATCACTGTGACAGCCCGGCGTTCTGTCGGGCTGTCCGTGCGAGACATCCCTTTCTCAAC
AGGACAAAGACATGCCCAGT

Product: solute-binding family 7 protein

Products: NA

Alternate protein names: Twin-Arginine Translocation Pathway Signal; TRAP Dicarboxylate Transporter Subunit DctP; Trap Dicarboxylate Transporter- Dctp Subunit; TRAP Dicarboxylate Transporter DctP Subunit; TRAP Dicarboxylate Family Transporter DctP Subunit; Transporter Periplasmic Component; Trap Dicarboxylate Family Transporter Dctp Subunit; TRAP Transporter DctP Family Protein; TRAP-Type Mannitol/Chloroaromatic Compound Transport System; Trap-T Transport System Periplasmic Component; Periplasmic TRAP-Type Dicarboxylate Transporter Protein; C4-Dicarboxylate Transporter; TRAP Transporter; Trap Dicarboxylate Transporter Dctp Subunit; TRAP Dicarboxylate Transporter- Dctp Subunit; Trap Dicarboxylate Transporter

Number of amino acids: Translated: 366; Mature: 365

Protein sequence:

>366_residues
MTIKTTSRRNALRTLAGAGAATLAAPHIATAAGEGTTWKIQTSHTGGIGLATFKDWCSSIEEKTGGELAFTAFGANDVVG
DFQLYDAVKNGVLDAVNPFTIYAQGIIPAATFLTSYPLGLRNPHEWDVFFYSLGGLEIARELYAAQGMKFVGPVHHGPNI
IHSKVPIRSIDDFAGLKMRMPGGMVAEVFSEIGAETTVLPGSEIFPALEKGTIDAADFVGPAVNYALGFSQVTNYISMGP
AGFMSLYQPVDLMDITVGQTAWDALSPQMQQFVEMETHVYSDMHHAAIQKADQEAWAKFEADGTEVTRLSQDDVELMTEV
AVPIWFDYANRDKDAARVFKIQLDYMMSGSLGYVTPEQIEGLTLNL

Sequences:

>Translated_366_residues
MTIKTTSRRNALRTLAGAGAATLAAPHIATAAGEGTTWKIQTSHTGGIGLATFKDWCSSIEEKTGGELAFTAFGANDVVG
DFQLYDAVKNGVLDAVNPFTIYAQGIIPAATFLTSYPLGLRNPHEWDVFFYSLGGLEIARELYAAQGMKFVGPVHHGPNI
IHSKVPIRSIDDFAGLKMRMPGGMVAEVFSEIGAETTVLPGSEIFPALEKGTIDAADFVGPAVNYALGFSQVTNYISMGP
AGFMSLYQPVDLMDITVGQTAWDALSPQMQQFVEMETHVYSDMHHAAIQKADQEAWAKFEADGTEVTRLSQDDVELMTEV
AVPIWFDYANRDKDAARVFKIQLDYMMSGSLGYVTPEQIEGLTLNL
>Mature_365_residues
TIKTTSRRNALRTLAGAGAATLAAPHIATAAGEGTTWKIQTSHTGGIGLATFKDWCSSIEEKTGGELAFTAFGANDVVGD
FQLYDAVKNGVLDAVNPFTIYAQGIIPAATFLTSYPLGLRNPHEWDVFFYSLGGLEIARELYAAQGMKFVGPVHHGPNII
HSKVPIRSIDDFAGLKMRMPGGMVAEVFSEIGAETTVLPGSEIFPALEKGTIDAADFVGPAVNYALGFSQVTNYISMGPA
GFMSLYQPVDLMDITVGQTAWDALSPQMQQFVEMETHVYSDMHHAAIQKADQEAWAKFEADGTEVTRLSQDDVELMTEVA
VPIWFDYANRDKDAARVFKIQLDYMMSGSLGYVTPEQIEGLTLNL

Specific function: Unknown

COG id: COG4663

COG function: function code Q; TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39667; Mature: 39536

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIKTTSRRNALRTLAGAGAATLAAPHIATAAGEGTTWKIQTSHTGGIGLATFKDWCSSI
CCCCCCCHHHHHHHHHCCCHHHHHCCHHHHCCCCCCEEEEEECCCCCEEHHHHHHHHHHH
EEKTGGELAFTAFGANDVVGDFQLYDAVKNGVLDAVNPFTIYAQGIIPAATFLTSYPLGL
HHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHCCCCC
RNPHEWDVFFYSLGGLEIARELYAAQGMKFVGPVHHGPNIIHSKVPIRSIDDFAGLKMRM
CCCCCCEEEEEECCHHHHHHHHHHHCCCCEECCCCCCCCCEECCCCCCCCCHHCCEEEEC
PGGMVAEVFSEIGAETTVLPGSEIFPALEKGTIDAADFVGPAVNYALGFSQVTNYISMGP
CCCHHHHHHHHHCCCEEECCCHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
AGFMSLYQPVDLMDITVGQTAWDALSPQMQQFVEMETHVYSDMHHAAIQKADQEAWAKFE
HHHHHHHCCCCCEEEECCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEC
ADGTEVTRLSQDDVELMTEVAVPIWFDYANRDKDAARVFKIQLDYMMSGSLGYVTPEQIE
CCCCCEEECCHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEEEEEEECCCCCCCCHHHHC
GLTLNL
CEEECC
>Mature Secondary Structure 
TIKTTSRRNALRTLAGAGAATLAAPHIATAAGEGTTWKIQTSHTGGIGLATFKDWCSSI
CCCCCCHHHHHHHHHCCCHHHHHCCHHHHCCCCCCEEEEEECCCCCEEHHHHHHHHHHH
EEKTGGELAFTAFGANDVVGDFQLYDAVKNGVLDAVNPFTIYAQGIIPAATFLTSYPLGL
HHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHCCCCC
RNPHEWDVFFYSLGGLEIARELYAAQGMKFVGPVHHGPNIIHSKVPIRSIDDFAGLKMRM
CCCCCCEEEEEECCHHHHHHHHHHHCCCCEECCCCCCCCCEECCCCCCCCCHHCCEEEEC
PGGMVAEVFSEIGAETTVLPGSEIFPALEKGTIDAADFVGPAVNYALGFSQVTNYISMGP
CCCHHHHHHHHHCCCEEECCCHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
AGFMSLYQPVDLMDITVGQTAWDALSPQMQQFVEMETHVYSDMHHAAIQKADQEAWAKFE
HHHHHHHCCCCCEEEECCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEC
ADGTEVTRLSQDDVELMTEVAVPIWFDYANRDKDAARVFKIQLDYMMSGSLGYVTPEQIE
CCCCCEEECCHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEEEEEEECCCCCCCCHHHHC
GLTLNL
CEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA