Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is 110680278

Identifier: 110680278

GI number: 110680278

Start: 2962927

End: 2963076

Strand: Direct

Name: 110680278

Synonym: RD1_3089

Alternate gene names: NA

Gene position: 2962927-2963076 (Clockwise)

Preceding gene: 110680275

Following gene: 110680279

Centisome position: 71.69

GC content: 50.67

Gene sequence:

>150_bases
ATGCTCCGATTCTTCAAATTCCTGATCTATCTGGCCGTGATCGGCTTTATTGCACTGGCGGGCTATACCTATATCGGTCC
GTTTTTCGGCGCTGATTTTTCAGCCCCCTCCGAAGAAACACGTGTGCCCGTGACATTGGATGCCGAATAG

Upstream 100 bases:

>100_bases
TCCGGTTTGCTCAATTTCGCTCATATTCGATTGAATGACGTGATATTATGAAAAAGGCCATATATAACTTAAAGAAAACG
GCAGGCATAAAGGCAGTATA

Downstream 100 bases:

>100_bases
ATATCTCTCATACGCGCTCTTGGGATTATGCCTGTGCCCGCCTGCTTTGGCGCAGGATCAGCCGCTGTCGGTCATTGACT
GGGTCAAACGCAACCCTGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 49; Mature: 49

Protein sequence:

>49_residues
MLRFFKFLIYLAVIGFIALAGYTYIGPFFGADFSAPSEETRVPVTLDAE

Sequences:

>Translated_49_residues
MLRFFKFLIYLAVIGFIALAGYTYIGPFFGADFSAPSEETRVPVTLDAE
>Mature_49_residues
MLRFFKFLIYLAVIGFIALAGYTYIGPFFGADFSAPSEETRVPVTLDAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5466; Mature: 5466

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRFFKFLIYLAVIGFIALAGYTYIGPFFGADFSAPSEETRVPVTLDAE
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECC
>Mature Secondary Structure
MLRFFKFLIYLAVIGFIALAGYTYIGPFFGADFSAPSEETRVPVTLDAE
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA