| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is ate [H]
Identifier: 110680013
GI number: 110680013
Start: 2672621
End: 2673481
Strand: Direct
Name: ate [H]
Synonym: RD1_2805
Alternate gene names: 110680013
Gene position: 2672621-2673481 (Clockwise)
Preceding gene: 110680012
Following gene: 110680017
Centisome position: 64.66
GC content: 57.61
Gene sequence:
>861_bases ATGTCCTTGCTAGTCTGCCGGGGAAGTTCGGCAAGGAATTACATGCGTCATACGTTACCGATAGCGCCTCAGTTTTACGT CACGGCCCCACAGCCGTGCCCGTATCTTGACGGCCGTATGGAACGCAAACTGTTCACGGCACTGCAGGGGGAAAGCGCGG ACAAGCTGAATGACAGCCTCTCCCAGCAAGGGTTTCGCCGATCGCAAAACGTGCTGTACCGACCCTCCTGTGCGGAGTGT TCGGCGTGCCTTTCGGCGCGCATTGATGTGTCGGAATTCGCACCGTCCCGCAGCCAGAAACGCACCATCAAACGCAACCA CGATCTGGCGCGGCGCGCGACCTCTCCCTGGGCGTCGGAAGAGCAATACGAACTCTTCCGCTCCTATCTGGACAGCCGCC ACGCGGATGGGGGCATGGCGGATATGGATGTTTTCGAATTCGCCGCGATGATCGAGGAAACGCCGATCCGAAGCCGCGTG GTCGAATACAAGAACCAGGACAGCGGCGCATTGATCGGCGTGAGCCTGACAGATGTGCTGTCGGACGGGCTGAGCATGGT CTATTCCTTCTATGCCCCGGATATGACAAAGCGCTCCATGGGCACCTATATGATCCTTGATCACATAGAAATCGCGCGTG AAGCCGGGTTGCCTTACGTCTATCTGGGATATTGGGTGCCGGGCAGTCAGAAGATGGGGTATAAATCCAAGTTTTCCGGT CTTGAAGTCTACATCGGCGGCAATTGGCAGAAGGTCAGGAATCCTTCGGAGTTCACCGCCGAAACGCATCCGCTTTCCAC CGATCCCATCGCGGAGCAGGTCGCGAATATACAACTGCCGGACACGCGCCCAACCCGTTAG
Upstream 100 bases:
>100_bases ACAGAGCGTGGACAAGGTTTGTCCGATCATGTTTTGGGGACCGTGATGATCAACAGGCGTGCGGTAATAAGTTAACCTTT GATATCTTGCCATCTGGCCG
Downstream 100 bases:
>100_bases CGGGAACCGCCATATCTGCGTTCGAATAGCTCTTCAGTATCAAACCTGCGCTGTATGGGAGCGCAGAAGCCATTTGCCTT TAACAACTGCCCCAATAAAA
Product: arginyl-tRNA-protein transferase
Products: NA
Alternate protein names: Arginyltransferase; R-transferase [H]
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MSLLVCRGSSARNYMRHTLPIAPQFYVTAPQPCPYLDGRMERKLFTALQGESADKLNDSLSQQGFRRSQNVLYRPSCAEC SACLSARIDVSEFAPSRSQKRTIKRNHDLARRATSPWASEEQYELFRSYLDSRHADGGMADMDVFEFAAMIEETPIRSRV VEYKNQDSGALIGVSLTDVLSDGLSMVYSFYAPDMTKRSMGTYMILDHIEIAREAGLPYVYLGYWVPGSQKMGYKSKFSG LEVYIGGNWQKVRNPSEFTAETHPLSTDPIAEQVANIQLPDTRPTR
Sequences:
>Translated_286_residues MSLLVCRGSSARNYMRHTLPIAPQFYVTAPQPCPYLDGRMERKLFTALQGESADKLNDSLSQQGFRRSQNVLYRPSCAEC SACLSARIDVSEFAPSRSQKRTIKRNHDLARRATSPWASEEQYELFRSYLDSRHADGGMADMDVFEFAAMIEETPIRSRV VEYKNQDSGALIGVSLTDVLSDGLSMVYSFYAPDMTKRSMGTYMILDHIEIAREAGLPYVYLGYWVPGSQKMGYKSKFSG LEVYIGGNWQKVRNPSEFTAETHPLSTDPIAEQVANIQLPDTRPTR >Mature_285_residues SLLVCRGSSARNYMRHTLPIAPQFYVTAPQPCPYLDGRMERKLFTALQGESADKLNDSLSQQGFRRSQNVLYRPSCAECS ACLSARIDVSEFAPSRSQKRTIKRNHDLARRATSPWASEEQYELFRSYLDSRHADGGMADMDVFEFAAMIEETPIRSRVV EYKNQDSGALIGVSLTDVLSDGLSMVYSFYAPDMTKRSMGTYMILDHIEIAREAGLPYVYLGYWVPGSQKMGYKSKFSGL EVYIGGNWQKVRNPSEFTAETHPLSTDPIAEQVANIQLPDTRPTR
Specific function: May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate (Potential) [H]
COG id: COG2935
COG function: function code O; Putative arginyl-tRNA:protein arginylyltransferase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the R-transferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016181 - InterPro: IPR007472 - InterPro: IPR017138 - InterPro: IPR007471 [H]
Pfam domain/function: PF04377 ATE_C; PF04376 ATE_N [H]
EC number: =2.3.2.8 [H]
Molecular weight: Translated: 32274; Mature: 32143
Theoretical pI: Translated: 7.45; Mature: 7.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLLVCRGSSARNYMRHTLPIAPQFYVTAPQPCPYLDGRMERKLFTALQGESADKLNDSL CEEEEECCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHH SQQGFRRSQNVLYRPSCAECSACLSARIDVSEFAPSRSQKRTIKRNHDLARRATSPWASE HHHHHHHCCCEEECCCHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCH EQYELFRSYLDSRHADGGMADMDVFEFAAMIEETPIRSRVVEYKNQDSGALIGVSLTDVL HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEEEHHHHH SDGLSMVYSFYAPDMTKRSMGTYMILDHIEIAREAGLPYVYLGYWVPGSQKMGYKSKFSG HHHHHHHHHHHCCCHHHHHCCCEEEHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCC LEVYIGGNWQKVRNPSEFTAETHPLSTDPIAEQVANIQLPDTRPTR EEEEECCCHHHHCCCHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SLLVCRGSSARNYMRHTLPIAPQFYVTAPQPCPYLDGRMERKLFTALQGESADKLNDSL EEEEECCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHH SQQGFRRSQNVLYRPSCAECSACLSARIDVSEFAPSRSQKRTIKRNHDLARRATSPWASE HHHHHHHCCCEEECCCHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCH EQYELFRSYLDSRHADGGMADMDVFEFAAMIEETPIRSRVVEYKNQDSGALIGVSLTDVL HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEEEHHHHH SDGLSMVYSFYAPDMTKRSMGTYMILDHIEIAREAGLPYVYLGYWVPGSQKMGYKSKFSG HHHHHHHHHHHCCCHHHHHCCCEEEHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCC LEVYIGGNWQKVRNPSEFTAETHPLSTDPIAEQVANIQLPDTRPTR EEEEECCCHHHHCCCHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA