Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is ate [H]

Identifier: 110680013

GI number: 110680013

Start: 2672621

End: 2673481

Strand: Direct

Name: ate [H]

Synonym: RD1_2805

Alternate gene names: 110680013

Gene position: 2672621-2673481 (Clockwise)

Preceding gene: 110680012

Following gene: 110680017

Centisome position: 64.66

GC content: 57.61

Gene sequence:

>861_bases
ATGTCCTTGCTAGTCTGCCGGGGAAGTTCGGCAAGGAATTACATGCGTCATACGTTACCGATAGCGCCTCAGTTTTACGT
CACGGCCCCACAGCCGTGCCCGTATCTTGACGGCCGTATGGAACGCAAACTGTTCACGGCACTGCAGGGGGAAAGCGCGG
ACAAGCTGAATGACAGCCTCTCCCAGCAAGGGTTTCGCCGATCGCAAAACGTGCTGTACCGACCCTCCTGTGCGGAGTGT
TCGGCGTGCCTTTCGGCGCGCATTGATGTGTCGGAATTCGCACCGTCCCGCAGCCAGAAACGCACCATCAAACGCAACCA
CGATCTGGCGCGGCGCGCGACCTCTCCCTGGGCGTCGGAAGAGCAATACGAACTCTTCCGCTCCTATCTGGACAGCCGCC
ACGCGGATGGGGGCATGGCGGATATGGATGTTTTCGAATTCGCCGCGATGATCGAGGAAACGCCGATCCGAAGCCGCGTG
GTCGAATACAAGAACCAGGACAGCGGCGCATTGATCGGCGTGAGCCTGACAGATGTGCTGTCGGACGGGCTGAGCATGGT
CTATTCCTTCTATGCCCCGGATATGACAAAGCGCTCCATGGGCACCTATATGATCCTTGATCACATAGAAATCGCGCGTG
AAGCCGGGTTGCCTTACGTCTATCTGGGATATTGGGTGCCGGGCAGTCAGAAGATGGGGTATAAATCCAAGTTTTCCGGT
CTTGAAGTCTACATCGGCGGCAATTGGCAGAAGGTCAGGAATCCTTCGGAGTTCACCGCCGAAACGCATCCGCTTTCCAC
CGATCCCATCGCGGAGCAGGTCGCGAATATACAACTGCCGGACACGCGCCCAACCCGTTAG

Upstream 100 bases:

>100_bases
ACAGAGCGTGGACAAGGTTTGTCCGATCATGTTTTGGGGACCGTGATGATCAACAGGCGTGCGGTAATAAGTTAACCTTT
GATATCTTGCCATCTGGCCG

Downstream 100 bases:

>100_bases
CGGGAACCGCCATATCTGCGTTCGAATAGCTCTTCAGTATCAAACCTGCGCTGTATGGGAGCGCAGAAGCCATTTGCCTT
TAACAACTGCCCCAATAAAA

Product: arginyl-tRNA-protein transferase

Products: NA

Alternate protein names: Arginyltransferase; R-transferase [H]

Number of amino acids: Translated: 286; Mature: 285

Protein sequence:

>286_residues
MSLLVCRGSSARNYMRHTLPIAPQFYVTAPQPCPYLDGRMERKLFTALQGESADKLNDSLSQQGFRRSQNVLYRPSCAEC
SACLSARIDVSEFAPSRSQKRTIKRNHDLARRATSPWASEEQYELFRSYLDSRHADGGMADMDVFEFAAMIEETPIRSRV
VEYKNQDSGALIGVSLTDVLSDGLSMVYSFYAPDMTKRSMGTYMILDHIEIAREAGLPYVYLGYWVPGSQKMGYKSKFSG
LEVYIGGNWQKVRNPSEFTAETHPLSTDPIAEQVANIQLPDTRPTR

Sequences:

>Translated_286_residues
MSLLVCRGSSARNYMRHTLPIAPQFYVTAPQPCPYLDGRMERKLFTALQGESADKLNDSLSQQGFRRSQNVLYRPSCAEC
SACLSARIDVSEFAPSRSQKRTIKRNHDLARRATSPWASEEQYELFRSYLDSRHADGGMADMDVFEFAAMIEETPIRSRV
VEYKNQDSGALIGVSLTDVLSDGLSMVYSFYAPDMTKRSMGTYMILDHIEIAREAGLPYVYLGYWVPGSQKMGYKSKFSG
LEVYIGGNWQKVRNPSEFTAETHPLSTDPIAEQVANIQLPDTRPTR
>Mature_285_residues
SLLVCRGSSARNYMRHTLPIAPQFYVTAPQPCPYLDGRMERKLFTALQGESADKLNDSLSQQGFRRSQNVLYRPSCAECS
ACLSARIDVSEFAPSRSQKRTIKRNHDLARRATSPWASEEQYELFRSYLDSRHADGGMADMDVFEFAAMIEETPIRSRVV
EYKNQDSGALIGVSLTDVLSDGLSMVYSFYAPDMTKRSMGTYMILDHIEIAREAGLPYVYLGYWVPGSQKMGYKSKFSGL
EVYIGGNWQKVRNPSEFTAETHPLSTDPIAEQVANIQLPDTRPTR

Specific function: May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate (Potential) [H]

COG id: COG2935

COG function: function code O; Putative arginyl-tRNA:protein arginylyltransferase

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the R-transferase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016181
- InterPro:   IPR007472
- InterPro:   IPR017138
- InterPro:   IPR007471 [H]

Pfam domain/function: PF04377 ATE_C; PF04376 ATE_N [H]

EC number: =2.3.2.8 [H]

Molecular weight: Translated: 32274; Mature: 32143

Theoretical pI: Translated: 7.45; Mature: 7.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLLVCRGSSARNYMRHTLPIAPQFYVTAPQPCPYLDGRMERKLFTALQGESADKLNDSL
CEEEEECCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHH
SQQGFRRSQNVLYRPSCAECSACLSARIDVSEFAPSRSQKRTIKRNHDLARRATSPWASE
HHHHHHHCCCEEECCCHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCH
EQYELFRSYLDSRHADGGMADMDVFEFAAMIEETPIRSRVVEYKNQDSGALIGVSLTDVL
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEEEHHHHH
SDGLSMVYSFYAPDMTKRSMGTYMILDHIEIAREAGLPYVYLGYWVPGSQKMGYKSKFSG
HHHHHHHHHHHCCCHHHHHCCCEEEHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCC
LEVYIGGNWQKVRNPSEFTAETHPLSTDPIAEQVANIQLPDTRPTR
EEEEECCCHHHHCCCHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SLLVCRGSSARNYMRHTLPIAPQFYVTAPQPCPYLDGRMERKLFTALQGESADKLNDSL
EEEEECCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHH
SQQGFRRSQNVLYRPSCAECSACLSARIDVSEFAPSRSQKRTIKRNHDLARRATSPWASE
HHHHHHHCCCEEECCCHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCH
EQYELFRSYLDSRHADGGMADMDVFEFAAMIEETPIRSRVVEYKNQDSGALIGVSLTDVL
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEEEHHHHH
SDGLSMVYSFYAPDMTKRSMGTYMILDHIEIAREAGLPYVYLGYWVPGSQKMGYKSKFSG
HHHHHHHHHHHCCCHHHHHCCCEEEHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCC
LEVYIGGNWQKVRNPSEFTAETHPLSTDPIAEQVANIQLPDTRPTR
EEEEECCCHHHHCCCHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA